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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDC20 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
157.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
157.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
107.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
96.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
95.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
88.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
79.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
78.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
70.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
70.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
63.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
62.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
61.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
58.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
57.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
56.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
52.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
49.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
46.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
44.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
42.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
42.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
40.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
39.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
38.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
36.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
36.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
33.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
33.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
32.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
32.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
31.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
30.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
30.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
30.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
29.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
28.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
27.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
27.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
27.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
27.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
25.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
25.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
25.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
25.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
24.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
24.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
23.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
21.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
21.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
21.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
21.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
21.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
20.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
20.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
19.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
19.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
19.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
19.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
18.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
18.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
18.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
18.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
18.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
18.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
18.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
17.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
17.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
17.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
16.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
15.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
15.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
15.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
15.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
15.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
14.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
14.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
14.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
13.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
11.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
10.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
10.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
9.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
8.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
7.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
7.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
7.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
5.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
5.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
5.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
4.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
4.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
3.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
3.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
3.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
2.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
2.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
2.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
2.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
2.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
2.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
0.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
0.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDC20 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
113.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
60.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
57.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
52.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
51.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
47.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
47.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
43.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
40.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
39.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
38.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
37.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
35.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
33.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
29.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
29.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
28.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
27.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
26.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
26.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
26.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
25.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
24.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
24.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
23.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
23.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
22.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
22.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
20.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
19.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
19.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
19.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
17.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
15.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
15.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
15.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
14.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
13.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
12.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
11.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
10.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
10.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
7.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
6.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
6.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
4.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
3.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
3.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
3.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
3.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
3.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
2.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
2.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
2.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
2.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
2.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
2.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
2.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
2.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
2.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
2.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
2.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
2.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
2.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
2.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
2.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
2.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
2.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
2.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
2.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
2.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
1.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
1.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
1.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
1.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
1.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
1.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
1.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
1.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
0.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
0.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
0.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
0.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
537
Tumor
1.8
943
Tumor
1.4
965
Tumor
1.4
923
Tumor
1.4
951
Tumor
1.4
663
Tumor
1.3
535
Tumor
1.3
661
Tumor
1.2
647
Tumor
1.1
367
Tumor
1.0
567
Tumor
1.0
953
Tumor
1.0
343
Tumor
1.0
737
Tumor
0.9
525
Tumor
0.9
724
Normal
0.9
523
Tumor
0.9
573
Tumor
0.8
666
Normal
0.8
956
Normal
0.8
957
Tumor
0.7
727
Tumor
0.7
284
Normal
0.7
533
Tumor
0.7
671
Tumor
0.6
672
Normal
0.6
351
Tumor
0.6
161
Tumor
0.6
665
Tumor
0.6
917
Tumor
0.6
357
Tumor
0.6
527
Tumor
0.5
171
Tumor
0.5
571
Tumor
0.5
695
Tumor
0.4
648
Normal
0.4
545
Tumor
0.4
664
Normal
0.4
662
Normal
0.4
228
Normal
0.3
697
Tumor
0.3
517
Tumor
0.3
375
Tumor
0.3
342
Normal
0.3
921
Tumor
0.3
925
Tumor
0.3
515
Tumor
0.3
915
Tumor
0.3
447
Tumor
0.3
354
Normal
0.2
383
Tumor
0.2
1043
Tumor
0.2
967
Tumor
0.2
976
Normal
0.2
937
Tumor
0.2
743
Tumor
0.2
516
Normal
0.2
361
Tumor
0.1
283
Tumor
0.1
187
Tumor
0.1
212
Normal
0.1
313
Tumor
0.1
924
Normal
0.1
188
Normal
0.1
722
Normal
0.1
353
Tumor
0.1
286
Normal
0.1
964
Normal
0.1
713
Tumor
0.0
944
Normal
0.0
954
Normal
0.0
916
Normal
0.0
358
Normal
0.0
955
Tumor
0.0
298
Normal
0.0
224
Normal
0.0
211
Tumor
0.0
285
Tumor
0.0
172
Normal
0.0
185
Tumor
0.0
952
Normal
0.0
132
Normal
0.0
352
Normal
0.0
148
Normal
-0.1
138
Normal
-0.1
922
Normal
-0.1
332
Normal
-0.1
314
Normal
-0.1
1045
Tumor
-0.1
341
Tumor
-0.1
963
Tumor
-0.1
918
Normal
-0.1
938
Normal
-0.1
145
Tumor
-0.1
135
Tumor
-0.1
227
Tumor
-0.1
365
Tumor
-0.1
966
Normal
-0.1
698
Normal
-0.1
136
Normal
-0.1
958
Normal
-0.2
344
Normal
-0.2
223
Tumor
-0.2
162
Normal
-0.2
146
Normal
-0.2
968
Normal
-0.2
186
Normal
-0.2
147
Tumor
-0.2
741
Tumor
-0.2
524
Normal
-0.2
277
Tumor
-0.3
926
Normal
-0.3
975
Tumor
-0.3
278
Normal
-0.3
1046
Normal
-0.3
141
Tumor
-0.3
312
Normal
-0.3
534
Normal
-0.3
384
Normal
-0.3
366
Normal
-0.4
131
Tumor
-0.4
536
Normal
-0.4
137
Tumor
-0.4
574
Normal
-0.4
528
Normal
-0.4
553
Tumor
-0.4
564
Normal
-0.5
362
Normal
-0.5
368
Normal
-0.5
142
Normal
-0.5
568
Normal
-0.5
557
Tumor
-0.5
538
Normal
-0.6
721
Tumor
-0.6
1044
Normal
-0.6
723
Tumor
-0.6
563
Tumor
-0.6
376
Normal
-0.6
526
Normal
-0.6
546
Normal
-0.6
311
Tumor
-0.7
744
Normal
-0.7
448
Normal
-0.7
685
Tumor
-0.7
331
Tumor
-0.7
518
Normal
-0.7
572
Normal
-0.8
554
Normal
-0.8
558
Normal
-0.8
297
Tumor
-0.8
742
Normal
-0.8
513
Tumor
-0.9
738
Normal
-1.0
728
Normal
-1.1
715
Tumor
-1.1
696
Normal
-1.3
514
Normal
-1.3
714
Normal
-1.4
716
Normal
-1.5
686
Normal
-1.7
471
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
474
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
268
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
862
Normal
N/A
983
Tumor
N/A
863
Tumor
N/A
984
Normal
N/A
864
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
433
Tumor
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
451
Tumor
N/A
452
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
463
Tumor
N/A
222
Normal
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
