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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDK18 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
70.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
53.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
49.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
43.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
40.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
40.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
38.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
37.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
37.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
35.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
34.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
34.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
32.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
31.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
31.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
31.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
31.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
30.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
30.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
30.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
29.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
29.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
29.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
29.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
26.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
26.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
26.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
26.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
25.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
25.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
23.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
23.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
22.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
22.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
22.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
22.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
22.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
22.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
21.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
21.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
21.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
21.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
21.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
21.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
20.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
20.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
20.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
19.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
19.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
19.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
19.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
19.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
18.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
18.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
17.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
17.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
17.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
17.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
17.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
16.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
15.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
15.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
15.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
14.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
13.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
12.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
12.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
12.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
11.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
10.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
10.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
10.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
10.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
10.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
10.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
8.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
8.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
7.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
7.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
5.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
4.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
4.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
4.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
3.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
3.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
3.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
3.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
3.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
3.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
2.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
2.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
2.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
0.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
0.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
0.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
0.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CDK18 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
231
Samples
Sample
Description
TPM
DO45241
0 years, male, NA, stage:1, alive, 1080 days
80.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
68.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
63.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
54.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
45.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
42.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
41.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
38.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
38.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
37.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
37.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
35.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
35.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
35.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
34.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
34.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
33.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
32.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
31.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
30.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
30.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
30.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
28.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
27.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
27.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
26.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
24.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
22.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
22.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
22.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
22.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
22.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
22.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
21.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
21.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
21.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
20.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
20.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
20.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
18.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
18.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
18.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
18.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
16.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
16.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
15.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
14.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
13.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
12.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
12.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
11.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
10.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
8.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
8.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
7.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
7.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
7.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
5.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
3.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
3.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
3.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
3.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
3.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
2.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
2.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
2.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
2.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
2.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
2.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
2.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
2.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
1.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
1.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
1.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
1.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
0.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.0
777
Tumor
0.9
1041
Tumor
0.9
357
Tumor
0.8
473
Tumor
0.8
443
Tumor
0.7
925
Tumor
0.7
137
Tumor
0.7
957
Tumor
0.6
697
Tumor
0.6
428
Normal
0.6
953
Tumor
0.6
414
Normal
0.6
913
Tumor
0.6
455
Tumor
0.5
465
Tumor
0.5
524
Normal
0.5
951
Tumor
0.5
513
Tumor
0.5
1042
Normal
0.5
192
Normal
0.5
344
Normal
0.4
297
Tumor
0.4
627
Tumor
0.4
354
Normal
0.4
873
Tumor
0.4
113
Tumor
0.4
883
Tumor
0.4
426
Normal
0.4
358
Normal
0.4
365
Tumor
0.4
361
Tumor
0.4
423
Tumor
0.4
471
Tumor
0.4
981
Tumor
0.4
445
Tumor
0.4
332
Normal
0.4
746
Normal
0.4
487
Tumor
0.3
424
Normal
0.3
977
Tumor
0.3
852
Normal
0.3
416
Normal
0.3
478
Normal
0.3
756
Normal
0.3
112
Tumor
0.3
126
Normal
0.3
665
Tumor
0.3
958
Normal
0.3
328
Normal
0.3
461
Tumor
0.3
723
Tumor
0.3
278
Normal
0.3
978
Normal
0.3
298
Normal
0.3
353
Tumor
0.3
135
Tumor
0.3
563
Tumor
0.3
312
Normal
0.3
1044
Normal
0.3
982
Normal
0.3
1043
Tumor
0.3
444
Normal
0.3
268
Normal
0.3
138
Normal
0.3
352
Normal
0.3
641
Tumor
0.2
857
Tumor
0.2
755
Tumor
0.2
741
Tumor
0.2
342
Normal
0.2
161
Tumor
0.2
863
Tumor
0.2
132
Normal
0.2
412
Normal
0.2
124
Normal
0.2
384
Normal
0.2
517
Tumor
0.2
387
Tumor
0.2
917
Tumor
0.2
647
Tumor
0.2
314
Normal
0.2
395
Tumor
0.2
861
Tumor
0.2
448
Normal
0.2
415
Tumor
0.2
817
Tumor
0.2
1021
Tumor
0.2
536
Normal
0.2
434
Normal
0.2
284
Normal
0.2
738
Normal
0.2
142
Normal
0.2
1016
Normal
0.2
363
Tumor
0.2
516
Normal
0.2
484
Normal
0.2
343
Tumor
0.2
362
Normal
0.2
422
Normal
0.2
538
Normal
0.2
924
Normal
0.2
262
Normal
0.2
127
Tumor
0.2
916
Normal
0.2
976
Normal
0.2
375
Tumor
0.2
217
Tumor
0.2
228
Normal
0.2
146
Normal
0.2
956
Normal
0.2
185
Tumor
0.2
188
Normal
0.2
818
Normal
0.2
1045
Tumor
0.2
191
Tumor
0.2
195
Tumor
0.2
224
Normal
0.2
964
Normal
0.2
431
Tumor
0.2
558
Normal
0.1
685
Tumor
0.1
187
Tumor
0.1
145
Tumor
0.1
436
Normal
0.1
376
Normal
0.1
514
Normal
0.1
474
Normal
0.1
716
Normal
0.1
698
Normal
0.1
482
Normal
0.1
136
Normal
0.1
498
Normal
0.1
573
Tumor
0.1
214
Normal
0.1
432
Normal
0.1
186
Normal
0.1
212
Normal
0.1
728
Normal
0.1
213
Tumor
0.1
1028
Normal
0.1
1046
Normal
0.1
368
Normal
0.1
713
Tumor
0.1
464
Normal
0.1
331
Tumor
0.1
111
Normal
0.1
525
Tumor
0.1
954
Normal
0.1
477
Tumor
0.1
366
Normal
0.1
715
Tumor
0.1
494
Normal
0.1
421
Tumor
0.1
356
Normal
0.1
567
Tumor
0.1
222
Normal
0.1
696
Normal
0.1
617
Tumor
0.1
196
Normal
0.1
128
Normal
0.1
447
Tumor
0.1
984
Normal
0.1
492
Normal
0.1
1015
Tumor
0.1
277
Tumor
0.1
778
Normal
0.1
114
Normal
0.1
814
Normal
0.1
824
Normal
0.1
1022
Normal
0.1
742
Normal
0.1
452
Normal
0.1
433
Tumor
0.1
966
Normal
0.0
364
Normal
0.0
914
Normal
0.0
786
Normal
0.0
526
Normal
0.0
672
Normal
0.0
874
Normal
0.0
488
Normal
0.0
355
Tumor
0.0
341
Tumor
0.0
963
Tumor
0.0
877
Tumor
0.0
572
Normal
0.0
915
Tumor
0.0
955
Tumor
0.0
351
Tumor
0.0
518
Normal
0.0
537
Tumor
0.0
968
Normal
0.0
466
Normal
0.0
722
Normal
0.0
851
Tumor
0.0
967
Tumor
0.0
123
Tumor
0.0
267
Tumor
0.0
1014
Normal
0.0
727
Tumor
0.0
141
Tumor
0.0
721
Tumor
0.0
671
Tumor
0.0
456
Normal
0.0
125
Tumor
0.0
744
Normal
0.0
884
Normal
0.0
468
Normal
0.0
148
Normal
0.0
635
Tumor
0.0
975
Tumor
0.0
272
Normal
0.0
386
Normal
0.0
636
Normal
0.0
367
Tumor
0.0
411
Tumor
0.0
162
Normal
0.0
472
Normal
0.0
446
Normal
0.0
686
Normal
0.0
172
Normal
0.0
628
Normal
0.0
918
Normal
0.0
515
Tumor
0.0
662
Normal
-0.1
218
Normal
-0.1
311
Tumor
-0.1
1026
Normal
-0.1
451
Tumor
-0.1
462
Normal
-0.1
1032
Normal
-0.1
922
Normal
-0.1
261
Tumor
-0.1
393
Tumor
-0.1
546
Normal
-0.1
258
Normal
-0.1
618
Normal
-0.1
642
Normal
-0.1
862
Normal
-0.1
553
Tumor
-0.1
912
Normal
-0.1
286
Normal
-0.1
391
Tumor
-0.1
528
Normal
-0.1
221
Tumor
-0.1
533
Tumor
-0.1
527
Tumor
-0.1
938
Normal
-0.1
388
Normal
-0.1
648
Normal
-0.1
858
Normal
-0.1
816
Normal
-0.1
926
Normal
-0.2
952
Normal
-0.2
568
Normal
-0.2
983
Tumor
-0.2
868
Normal
-0.2
232
Normal
-0.2
714
Normal
-0.2
427
Tumor
-0.2
944
Normal
-0.2
864
Normal
-0.2
564
Normal
-0.2
866
Normal
-0.2
661
Tumor
-0.2
616
Normal
-0.2
943
Tumor
-0.2
413
Tumor
-0.2
878
Normal
-0.2
882
Normal
-0.2
785
Tumor
-0.2
574
Normal
-0.2
493
Tumor
-0.2
554
Normal
-0.2
666
Normal
-0.2
881
Tumor
-0.2
664
Normal
-0.2
534
Normal
-0.2
435
Tumor
-0.2
557
Tumor
-0.2
147
Tumor
-0.2
1031
Tumor
-0.2
481
Tumor
-0.2
283
Tumor
-0.2
737
Tumor
-0.2
745
Tumor
-0.2
1013
Tumor
-0.2
227
Tumor
-0.3
171
Tumor
-0.3
385
Tumor
-0.3
571
Tumor
-0.3
257
Tumor
-0.3
545
Tumor
-0.3
867
Tumor
-0.3
615
Tumor
-0.3
965
Tumor
-0.3
483
Tumor
-0.3
663
Tumor
-0.3
396
Normal
-0.3
271
Tumor
-0.3
467
Tumor
-0.3
392
Normal
-0.3
231
Tumor
-0.3
695
Tumor
-0.3
327
Tumor
-0.4
823
Tumor
-0.4
911
Tumor
-0.4
463
Tumor
-0.4
491
Tumor
-0.4
923
Tumor
-0.4
425
Tumor
-0.4
383
Tumor
-0.4
523
Tumor
-0.4
535
Tumor
-0.4
285
Tumor
-0.4
724
Normal
-0.4
313
Tumor
-0.4
743
Tumor
-0.5
1025
Tumor
-0.5
497
Tumor
-0.5
223
Tumor
-0.5
131
Tumor
-0.5
813
Tumor
-0.5
394
Normal
-0.5
1027
Tumor
-0.6
921
Tumor
-0.6
815
Tumor
-0.8
937
Tumor
-0.8
865
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
