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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ADGRL2 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
62.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
49.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
47.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
43.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
39.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
36.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
32.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
32.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
31.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
31.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
30.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
30.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
30.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
30.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
28.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
26.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
26.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
25.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
24.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
24.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
23.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
22.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
22.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
22.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
21.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
21.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
21.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
19.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
18.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
18.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
18.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
18.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
18.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
17.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
17.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
17.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
17.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
16.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
16.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
16.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
16.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
15.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
15.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
15.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
15.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
15.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
15.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
15.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
15.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
14.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
14.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
14.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
14.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
14.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
14.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
14.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
14.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
14.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
14.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
14.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
13.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
12.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
11.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
11.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
11.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
11.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
11.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
10.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
10.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
10.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
9.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
9.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
8.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
4.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
2.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
2.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
737
Tumor
1.2
943
Tumor
1.1
967
Tumor
0.9
431
Tumor
0.9
535
Tumor
0.9
463
Tumor
0.7
743
Tumor
0.7
131
Tumor
0.7
517
Tumor
0.6
944
Normal
0.6
478
Normal
0.6
955
Tumor
0.6
851
Tumor
0.5
364
Normal
0.5
367
Tumor
0.5
918
Normal
0.5
956
Normal
0.5
481
Tumor
0.5
567
Tumor
0.5
162
Normal
0.5
497
Tumor
0.5
285
Tumor
0.5
952
Normal
0.5
192
Normal
0.5
414
Normal
0.5
416
Normal
0.5
968
Normal
0.5
482
Normal
0.5
911
Tumor
0.4
721
Tumor
0.4
428
Normal
0.4
536
Normal
0.4
912
Normal
0.4
863
Tumor
0.4
125
Tumor
0.4
1025
Tumor
0.4
545
Tumor
0.4
744
Normal
0.4
148
Normal
0.4
868
Normal
0.4
714
Normal
0.4
957
Tumor
0.4
878
Normal
0.4
958
Normal
0.4
212
Normal
0.4
424
Normal
0.4
722
Normal
0.4
924
Normal
0.4
742
Normal
0.4
268
Normal
0.4
186
Normal
0.4
422
Normal
0.4
415
Tumor
0.4
412
Normal
0.4
258
Normal
0.4
474
Normal
0.4
954
Normal
0.3
494
Normal
0.3
648
Normal
0.3
284
Normal
0.3
568
Normal
0.3
938
Normal
0.3
387
Tumor
0.3
223
Tumor
0.3
384
Normal
0.3
976
Normal
0.3
738
Normal
0.3
574
Normal
0.3
426
Normal
0.3
297
Tumor
0.3
1044
Normal
0.3
874
Normal
0.3
852
Normal
0.3
224
Normal
0.3
813
Tumor
0.3
196
Normal
0.3
862
Normal
0.3
661
Tumor
0.3
172
Normal
0.3
434
Normal
0.3
228
Normal
0.3
922
Normal
0.3
964
Normal
0.3
647
Tumor
0.3
745
Tumor
0.3
558
Normal
0.3
498
Normal
0.3
824
Normal
0.3
413
Tumor
0.3
278
Normal
0.3
366
Normal
0.3
191
Tumor
0.3
716
Normal
0.3
728
Normal
0.3
356
Normal
0.3
368
Normal
0.3
514
Normal
0.3
518
Normal
0.3
616
Normal
0.3
386
Normal
0.3
222
Normal
0.3
188
Normal
0.3
492
Normal
0.3
533
Tumor
0.3
756
Normal
0.2
686
Normal
0.2
456
Normal
0.2
472
Normal
0.2
884
Normal
0.2
723
Tumor
0.2
572
Normal
0.2
1042
Normal
0.2
628
Normal
0.2
662
Normal
0.2
537
Tumor
0.2
448
Normal
0.2
314
Normal
0.2
488
Normal
0.2
814
Normal
0.2
362
Normal
0.2
926
Normal
0.2
462
Normal
0.2
427
Tumor
0.2
136
Normal
0.2
984
Normal
0.2
977
Tumor
0.2
526
Normal
0.2
146
Normal
0.2
425
Tumor
0.2
672
Normal
0.2
312
Normal
0.2
554
Normal
0.2
484
Normal
0.2
864
Normal
0.2
618
Normal
0.2
464
Normal
0.2
232
Normal
0.2
272
Normal
0.2
698
Normal
0.2
564
Normal
0.2
376
Normal
0.2
214
Normal
0.2
126
Normal
0.2
538
Normal
0.2
816
Normal
0.2
111
Normal
0.2
298
Normal
0.2
534
Normal
0.2
573
Tumor
0.2
524
Normal
0.2
818
Normal
0.2
1046
Normal
0.2
262
Normal
0.2
112
Tumor
0.2
332
Normal
0.2
354
Normal
0.2
444
Normal
0.2
447
Tumor
0.2
328
Normal
0.1
383
Tumor
0.1
352
Normal
0.1
436
Normal
0.1
452
Normal
0.1
916
Normal
0.1
466
Normal
0.1
636
Normal
0.1
283
Tumor
0.1
546
Normal
0.1
286
Normal
0.1
1014
Normal
0.1
696
Normal
0.1
132
Normal
0.1
866
Normal
0.1
218
Normal
0.1
388
Normal
0.1
396
Normal
0.1
978
Normal
0.1
468
Normal
0.1
882
Normal
0.1
217
Tumor
0.1
394
Normal
0.1
1022
Normal
0.1
755
Tumor
0.1
1028
Normal
0.1
1016
Normal
0.1
975
Tumor
0.1
914
Normal
0.1
344
Normal
0.1
983
Tumor
0.1
114
Normal
0.1
257
Tumor
0.1
615
Tumor
0.1
664
Normal
0.1
823
Tumor
0.1
817
Tumor
0.1
331
Tumor
0.1
858
Normal
0.1
966
Normal
0.1
923
Tumor
0.1
392
Normal
0.1
421
Tumor
0.1
432
Normal
0.0
982
Normal
0.0
161
Tumor
0.0
1045
Tumor
0.0
617
Tumor
0.0
516
Normal
0.0
778
Normal
0.0
513
Tumor
0.0
1026
Normal
0.0
642
Normal
0.0
138
Normal
0.0
145
Tumor
0.0
786
Normal
0.0
666
Normal
0.0
1041
Tumor
0.0
142
Normal
0.0
135
Tumor
0.0
363
Tumor
0.0
525
Tumor
0.0
342
Normal
0.0
455
Tumor
0.0
571
Tumor
0.0
358
Normal
0.0
1032
Normal
-0.1
433
Tumor
-0.1
1021
Tumor
-0.1
477
Tumor
-0.1
361
Tumor
-0.1
857
Tumor
-0.1
785
Tumor
-0.1
523
Tumor
-0.1
185
Tumor
-0.1
435
Tumor
-0.1
327
Tumor
-0.1
423
Tumor
-0.1
627
Tumor
-0.1
461
Tumor
-0.1
746
Normal
-0.1
877
Tumor
-0.1
124
Normal
-0.1
353
Tumor
-0.1
815
Tumor
-0.1
446
Normal
-0.1
528
Normal
-0.1
341
Tumor
-0.2
128
Normal
-0.2
951
Tumor
-0.2
267
Tumor
-0.2
563
Tumor
-0.2
915
Tumor
-0.2
365
Tumor
-0.2
553
Tumor
-0.2
867
Tumor
-0.2
491
Tumor
-0.2
981
Tumor
-0.2
713
Tumor
-0.2
873
Tumor
-0.2
311
Tumor
-0.2
963
Tumor
-0.2
635
Tumor
-0.3
137
Tumor
-0.3
467
Tumor
-0.3
917
Tumor
-0.3
261
Tumor
-0.3
343
Tumor
-0.3
671
Tumor
-0.3
141
Tumor
-0.3
881
Tumor
-0.3
395
Tumor
-0.3
113
Tumor
-0.3
1043
Tumor
-0.3
277
Tumor
-0.3
527
Tumor
-0.4
1013
Tumor
-0.4
515
Tumor
-0.4
451
Tumor
-0.4
195
Tumor
-0.4
921
Tumor
-0.4
493
Tumor
-0.4
187
Tumor
-0.4
697
Tumor
-0.4
965
Tumor
-0.4
375
Tumor
-0.5
313
Tumor
-0.5
727
Tumor
-0.5
393
Tumor
-0.5
147
Tumor
-0.5
741
Tumor
-0.5
271
Tumor
-0.5
221
Tumor
-0.5
715
Tumor
-0.5
1027
Tumor
-0.6
777
Tumor
-0.6
391
Tumor
-0.6
483
Tumor
-0.6
411
Tumor
-0.6
937
Tumor
-0.6
465
Tumor
-0.6
355
Tumor
-0.6
1015
Tumor
-0.7
665
Tumor
-0.7
1031
Tumor
-0.7
487
Tumor
-0.7
473
Tumor
-0.7
213
Tumor
-0.7
385
Tumor
-0.7
171
Tumor
-0.8
641
Tumor
-0.8
127
Tumor
-0.8
913
Tumor
-0.8
471
Tumor
-0.8
557
Tumor
-0.8
227
Tumor
-0.9
861
Tumor
-0.9
211
Tumor
-0.9
351
Tumor
-0.9
663
Tumor
-1.0
883
Tumor
-1.0
357
Tumor
-1.0
865
Tumor
-1.0
685
Tumor
-1.1
925
Tumor
-1.1
724
Normal
-1.2
695
Tumor
-1.2
443
Tumor
-1.3
953
Tumor
-1.3
231
Tumor
-1.3
123
Tumor
-1.4
445
Tumor
-1.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.