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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
3.1
nTPM
HPA Brain:
7.4
nTPM
GTEx:
3.1
nTPM
FANTOM5:
14.8
Scaled Tags Per Million
Pig:
36.1
nTPM
SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7.4
Sample id
Sample description
nTPM
Cervical spinal cord, central gray nTPM: 4.8
2565
Male, age 75, midline
5.8
1981
Female, age 72, midline
4.9
2048
Male, age 55, midline
4.7
2816
Male, age 47, midline
4.5
2194
Female, age 79, both hemispheres
4.0
Cervical spinal cord, dorsal horn nTPM: 5.1
2173
Female, age 72, unknown
6.9
2297
Male, age 75, both hemispheres
4.9
1877
Male, age 55, unknown
4.8
2296
Male, age 66, both hemispheres
4.8
2069
Male, age 47, both hemispheres
4.6
2721
Male, age 90, both hemispheres
4.3
Cervical spinal cord, ventral horn nTPM: 7.4
2098
Female, age 72, unknown
11.4
2809
Male, age 90, both hemispheres
7.5
2295
Male, age 66, both hemispheres
7.1
2068
Male, age 55, unknown
6.3
2480
Male, age 75, both hemispheres
6.2
2820
Female, age 79, both hemispheres
6.2
SPINAL CORD - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
3.1
GTEx sample id
Sample description
nTPM
Brain - Spinal cord (cervical c-1) Average nTPM: 3.1
Samples: 159
Max nTPM: 13.2
Min nTPM: 0.6
Std nTPM: 2.0
Median nTPM: 2.7
GTEX-15CHQ-0011-R9a-SM-6LLHX
60-69 years, male
13.2
GTEX-1I1HK-0011-R9a-SM-CMKHK
60-69 years, male
12.3
GTEX-13OW5-0011-R9b-SM-5O9CL
60-69 years, male
11.2
GTEX-1H23P-0011-R9a-SM-CM2T1
60-69 years, male
10.3
GTEX-1CB4H-0011-R9a-SM-CKZNL
60-69 years, female
9.1
GTEX-16XZZ-0011-R9b-SM-7DHKX
60-69 years, male
7.3
GTEX-13CZV-0011-R9a-SM-5LZXT
60-69 years, male
6.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK
40-49 years, female
6.7
GTEX-13NYS-0011-R9b-SM-5MR44
60-69 years, male
6.6
GTEX-1H1DF-0011-R9b-SM-CM2RN
40-49 years, female
6.4
GTEX-T5JC-0011-R9A-SM-32PLV
20-29 years, male
6.0
GTEX-1GN2E-0011-R9b-SM-9WG7F
60-69 years, male
5.8
GTEX-15DCD-0011-R9b-SM-7KUED
70-79 years, female
5.7
GTEX-1C6VS-0011-R9b-SM-9WG5W
60-69 years, male
5.5
GTEX-1HBPM-0011-R9b-SM-ARL7C
60-69 years, female
5.4
GTEX-14E6C-0011-R9a-SM-6EU33
40-49 years, male
5.3
GTEX-1EH9U-0011-R9b-SM-9WG5T
60-69 years, male
5.2
GTEX-13QJC-0011-R9b-SM-5PNX3
60-69 years, female
5.1
GTEX-13X6I-0011-R9b-SM-5PNZJ
60-69 years, male
5.1
GTEX-14BIL-0011-R9a-SM-5SI7A
50-59 years, male
4.9
GTEX-NPJ8-0011-R9a-SM-2YUN5
40-49 years, male
4.9
GTEX-NPJ7-0011-R9a-SM-2TC5R
60-69 years, female
4.8
GTEX-ZF28-0011-R9a-SM-4WWDY
60-69 years, male
4.8
GTEX-11WQK-0011-R9b-SM-5BC6N
50-59 years, male
4.7
GTEX-XMD1-0011-R9A-SM-4AT49
60-69 years, male
4.7
GTEX-1H2FU-0011-R9b-SM-CE6S4
60-69 years, female
4.5
GTEX-1HR98-0011-R9b-SM-ARL79
60-69 years, male
4.5
GTEX-13FLV-0011-R9b-SM-5L3DA
50-59 years, male
4.4
GTEX-13OVJ-0011-R9b-SM-5L3GD
50-59 years, female
4.4
GTEX-XLM4-0011-R9A-SM-4AT45
60-69 years, male
4.3
GTEX-1GF9W-0011-R9b-SM-9WG7J
60-69 years, male
4.3
GTEX-1192X-0011-R9b-SM-DO934
50-59 years, male
4.2
GTEX-139UW-0011-R9b-SM-5LZYT
60-69 years, male
4.1
GTEX-18464-0011-R9a-SM-731BK
50-59 years, male
4.0
GTEX-11UD2-0011-R9b-SM-DO926
50-59 years, male
3.9
GTEX-1I1GV-0011-R9b-SM-ARZLE
60-69 years, male
3.9
GTEX-17EVQ-0011-R9b-SM-79OJY
70-79 years, male
3.8
GTEX-TSE9-0011-R9A-SM-3DB7Q
60-69 years, female
3.8
GTEX-1A32A-0011-R9b-SM-7MGXD
50-59 years, female
3.8
GTEX-1H1DG-0011-R9b-SM-ACKVB
70-79 years, male
3.8
GTEX-QDT8-0011-R9A-SM-CYPRD
30-39 years, female
3.7
GTEX-13PVQ-0011-R9b-SM-5LU3B
50-59 years, male
3.6
GTEX-148VJ-0011-R9b-SM-5SI77
70-79 years, male
3.6
GTEX-1B933-0011-R9a-SM-79OOR
50-59 years, female
3.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E
60-69 years, male
3.6
GTEX-13S7M-0011-R9a-SM-5O9DW
60-69 years, female
3.5
GTEX-OHPN-0011-R9A-SM-5TDEJ
60-69 years, female
3.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z
40-49 years, male
3.5
GTEX-16NPV-0011-R9b-SM-79ONF
50-59 years, female
3.4
GTEX-OXRO-0011-R9A-SM-3NB1X
60-69 years, female
3.4
GTEX-ZE9C-0011-R9a-SM-4WWCY
60-69 years, male
3.4
GTEX-1I1GS-0011-R9b-SM-CMKHF
60-69 years, male
3.4
GTEX-139T4-0011-R9b-SM-5HL6S
50-59 years, female
3.3
GTEX-13VXU-0011-R9b-SM-5SI73
50-59 years, male
3.3
GTEX-14BMV-0011-R9b-SM-5ZZUA
50-59 years, male
3.3
GTEX-15DDE-0011-R9b-SM-6M46U
50-59 years, female
3.3
GTEX-1C6VQ-0011-R9a-SM-7SB85
50-59 years, male
3.3
GTEX-1HSMO-0011-R9b-SM-CM2T2
60-69 years, male
3.3
GTEX-12WSC-0011-R9a-SM-5GU4U
50-59 years, male
3.2
GTEX-13CIG-0011-R9a-SM-5K7VU
50-59 years, male
3.2
GTEX-13NZA-0011-R9b-SM-5MR5I
60-69 years, male
3.1
GTEX-13O1R-0011-R9b-SM-5KM33
60-69 years, male
3.1
GTEX-13SLX-0011-R9b-SM-5SI6X
50-59 years, female
3.1
GTEX-14PJO-0011-R9b-SM-62LE9
60-69 years, male
3.1
GTEX-15EO6-0011-R9a-SM-6PALG
50-59 years, male
3.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ
70-79 years, male
3.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6
40-49 years, female
3.1
GTEX-WL46-0011-R9A-SM-3MJFP
50-59 years, male
3.1
GTEX-1F52S-0011-R9a-SM-9WG62
60-69 years, female
3.1
GTEX-1LSNL-0011-R9b-SM-EYYWK
50-59 years, male
3.1
GTEX-13JUV-0011-R9a-SM-5LZX3
40-49 years, female
2.9
GTEX-ZVZQ-0011-R9a-SM-51MRH
60-69 years, female
2.9
GTEX-13SLW-0011-R9a-SM-5O9BT
70-79 years, male
2.8
GTEX-14PN4-0011-R9a-SM-6LLH9
50-59 years, male
2.8
GTEX-ZAB4-0011-R9a-SM-4SOKG
40-49 years, male
2.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP
60-69 years, male
2.8
GTEX-131XW-0011-R9a-SM-5N9EO
50-59 years, female
2.7
GTEX-11DZ1-0011-R9a-SM-DO933
50-59 years, male
2.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A
40-49 years, male
2.7
GTEX-PWO3-0011-R9A-SM-EVR2V
60-69 years, female
2.7
GTEX-13NYB-0011-R9b-SM-5MR5P
40-49 years, male
2.6
GTEX-1CAV2-0011-R9b-SM-9WG5M
40-49 years, female
2.6
GTEX-1F6I4-0011-R9a-SM-CMKFU
60-69 years, male
2.6
GTEX-1GZHY-0011-R9a-SM-9WG5R
50-59 years, female
2.6
GTEX-1I19N-0011-R9a-SM-CMKHN
70-79 years, male
2.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF
60-69 years, female
2.6
GTEX-RU72-0011-R9A-SM-2TF67
50-59 years, female
2.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L
70-79 years, female
2.5
GTEX-1HGF4-0011-R9a-SM-ADEH9
60-69 years, male
2.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI
60-69 years, male
2.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ
50-59 years, male
2.5
GTEX-1I1CD-0011-R9a-SM-CMKHB
60-69 years, female
2.4
GTEX-13N2G-0011-R9b-SM-5MR4E
60-69 years, male
2.3
GTEX-11EMC-0011-R9b-SM-DO921
60-69 years, female
2.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7
60-69 years, male
2.3
GTEX-1R46S-0011-R9a-SM-EZ6N7
60-69 years, female
2.3
GTEX-13PLJ-0011-R9b-SM-5O9DV
60-69 years, female
2.2
GTEX-14BIM-0011-R9a-SM-6LLJL
60-69 years, female
2.2
GTEX-QVUS-0011-R9A-SM-3GIJA
60-69 years, female
2.2
GTEX-R55E-0011-R9A-SM-2TC6C
20-29 years, male
2.2
GTEX-RNOR-0011-R9A-SM-2TF52
50-59 years, female
2.2
GTEX-YFC4-0011-R9a-SM-4SOK4
40-49 years, female
2.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO
70-79 years, male
2.2
GTEX-13PL6-0011-R9b-SM-5O9CH
40-49 years, female
2.1
GTEX-15DYW-0011-R9b-SM-6PALB
60-69 years, female
2.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY
60-69 years, male
2.0
GTEX-14ABY-0011-R9a-SM-5PNZK
50-59 years, male
2.0
GTEX-15ER7-0011-R9b-SM-6PALF
20-29 years, female
2.0
GTEX-15G19-0011-R9b-SM-7KUEE
60-69 years, male
2.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY
60-69 years, male
2.0
GTEX-12WSH-0011-R9b-SM-5LZUG
50-59 years, male
1.9
GTEX-13FXS-0011-R9a-SM-5K7UI
50-59 years, male
1.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8
50-59 years, male
1.9
GTEX-1HBPH-0011-R9a-SM-CMKH3
40-49 years, female
1.9
GTEX-11GSP-0011-R9b-SM-5NQ77
60-69 years, female
1.8
GTEX-11ZVC-0011-R9a-SM-57WC5
50-59 years, female
1.8
GTEX-YJ89-0011-R9a-SM-4SOK7
60-69 years, male
1.8
GTEX-12126-0011-R9b-SM-5BC6P
20-29 years, male
1.7
GTEX-14BIN-0011-R9a-SM-5SI76
50-59 years, female
1.7
GTEX-1F88F-0011-R9b-SM-9WG7L
60-69 years, female
1.7
GTEX-1HBPI-0011-R9b-SM-ARL76
50-59 years, male
1.7
GTEX-131YS-0011-R9b-SM-5EQLY
60-69 years, female
1.6
GTEX-14PJM-0011-R9b-SM-6EU35
50-59 years, female
1.6
GTEX-16Z82-0011-R9a-SM-7DUFA
60-69 years, male
1.6
GTEX-1HFI6-0011-R9b-SM-CMKH4
40-49 years, male
1.6
GTEX-1JMLX-0011-R9a-SM-EYYXM
50-59 years, male
1.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1
50-59 years, female
1.6
GTEX-11ONC-0011-R9b-SM-5NQ8J
60-69 years, male
1.5
GTEX-13N1W-0011-R9b-SM-5MR4R
70-79 years, male
1.5
GTEX-147GR-0011-R9a-SM-5S2UY
60-69 years, male
1.5
GTEX-1IY9M-0011-R9b-SM-D3L8J
60-69 years, male
1.5
GTEX-12WSD-0011-R9a-SM-5GU6W
60-69 years, female
1.4
GTEX-13OVL-0011-R9a-SM-5P9GX
50-59 years, male
1.4
GTEX-14JIY-0011-R9a-SM-6EU34
60-69 years, male
1.4
GTEX-NL4W-0011-R9a-SM-2I3G1
50-59 years, male
1.4
GTEX-1B8L1-0011-R9b-SM-9WG5U
60-69 years, male
1.4
GTEX-11ZUS-0011-R9b-SM-5BC76
30-39 years, male
1.3
GTEX-145LU-0011-R9b-SM-5SI66
50-59 years, male
1.3
GTEX-1EKGG-0011-R9a-SM-CMKFV
60-69 years, male
1.3
GTEX-1EU9M-0011-R9a-SM-9WG61
60-69 years, male
1.3
GTEX-1GN1U-0011-R9b-SM-CMKFW
50-59 years, female
1.3
GTEX-1IGQW-0011-R9b-SM-D4P25
60-69 years, male
1.3
GTEX-1J8EW-0011-R9b-SM-D4P2F
60-69 years, female
1.3
GTEX-14E7W-0011-R9a-SM-62LE6
70-79 years, male
1.2
GTEX-1GTWX-0011-R9a-SM-ADEH4
60-69 years, male
1.2
GTEX-1A8G7-0011-R9b-SM-7IGQH
60-69 years, male
1.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ
60-69 years, male
1.1
GTEX-1IDJH-0011-R9a-SM-ADEIN
70-79 years, male
1.1
GTEX-1LVA9-0011-R9a-SM-EYYWF
50-59 years, male
1.1
GTEX-13FTY-0011-R9b-SM-5KM2U
40-49 years, female
1.0
GTEX-1KANB-0011-R9b-SM-EZ6MO
50-59 years, male
1.0
GTEX-QVJO-0011-R9A-SM-2S1QH
60-69 years, female
0.9
GTEX-1GF9V-0011-R9a-SM-CL53K
60-69 years, male
0.9
GTEX-1GN73-0011-R9a-SM-CKZO5
60-69 years, male
0.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR
60-69 years, female
0.8
GTEX-T6MN-0011-R9A-SM-32QOZ
50-59 years, male
0.7
GTEX-11ZTS-0011-R9b-SM-DO93Q
60-69 years, female
0.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3
60-69 years, male
0.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP
50-59 years, male
0.6
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SPINAL CORD - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
