HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:18.1 nTPM
HPA Brain:20.3 nTPM
GTEx:18.1 nTPM
FANTOM5:79.6 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:144.0 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031054Antibody HPA031055Antibody CAB034263
Glial cells Not detectedLowNot detected
Neuronal cells LowLowNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.7
1898 Male, age 80, left hemisphere 24.0
1855 Male, age 76, left hemisphere 18.9
2529 Female, age 94, left hemisphere 17.3
1911 Female, age 85, right hemisphere 17.2
2621 Female, age 67, right hemisphere 15.2
2148 Female, age 91, left hemisphere 13.6
Dentate gyrus
nTPM: 17.3
1927 Female, age 91, both hemispheres 21.0
2010 Male, age 76, both hemispheres 20.6
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 16.1
2246 Female, age 85, both hemispheres 15.9
2531 Female, age 67, both hemispheres 11.6
Entorhinal gyrus
nTPM: 15.5
1938 Female, age 85, left hemisphere 19.5
2613 Female, age 94, left hemisphere 15.5
1787 Male, age 76, left hemisphere 15.4
2764 Male, age 80, right hemisphere 14.7
2686 Male, age 75, right hemisphere 13.9
2117 Female, age 91, right hemisphere 13.7
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 28.1
1873 Female, age 85, both hemispheres 22.7
2527 Male, age 74, both hemispheres 17.6
2045 Male, age 76, both hemispheres 16.5
2082 Female, age 91, right hemisphere 15.3
Hippocampus, CA2
nTPM: 18.9
1892 Male, age 76, both hemispheres 24.7
2249 Male, age 74, both hemispheres 21.2
1963 Male, age 80, left hemisphere 19.3
1940 Female, age 85, left hemisphere 18.9
2113 Female, age 91, right hemisphere 15.2
2437 Female, age 94, left hemisphere 13.8
Hippocampus, CA3
nTPM: 19.1
2137 Male, age 80, left hemisphere 24.8
2436 Male, age 74, both hemispheres 23.9
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 19.4
2620 Female, age 94, left hemisphere 13.0
2861 Female, age 67, both hemispheres 12.1
Parahippocampal cortex
nTPM: 16.3
1850 Male, age 80, both hemispheres 20.9
2250 Female, age 67, right hemisphere 19.8
1933 Female, age 85, both hemispheres 18.2
1990 Female, age 91, right hemisphere 17.2
2245 Female, age 91, both hemispheres 17.2
2018 Male, age 76, both hemispheres 16.8
2693 Female, age 94, both hemispheres 15.4
2692 Male, age 74, both hemispheres 14.1
2532 Female, age 72, left hemisphere 13.7
2622 Female, age 67, right hemisphere 9.2
Perirhinal gyrus
nTPM: 20.3
1841 Female, age 85, right hemisphere 24.0
1847 Female, age 91, left hemisphere 21.4
2521 Female, age 94, right hemisphere 19.3
1794 Male, age 80, right hemisphere 18.3
2848 Male, age 76, right hemisphere 18.3
Subiculum
nTPM: 17.2
1901 Male, age 80, both hemispheres 21.6
2438 Female, age 94, left hemisphere 19.4
1977 Female, age 85, both hemispheres 18.7
2042 Male, age 76, both hemispheres 15.9
2729 Female, age 91, right hemisphere 14.4
2619 Male, age 74, both hemispheres 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 48.1
Min nTPM: 7.1
Std nTPM: 5.2
Median nTPM: 17.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 48.1
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 36.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 35.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 32.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 32.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 30.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 29.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 28.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 28.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 27.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 79.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.6
FF:10169-103B7 60 years, female 93.4
FF:10153-102I9 76 years, female 65.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.4
Pig sample Sample description nTPM
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 18.1
Sample A Female 18.1
Sample B Female 19.5
Sample C Male 20.1
Sample D Male 20.1
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 17.5
Sample C Male 19.0
Sample D Male 19.6
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.4
Sample A Female 16.4
Sample B Female 17.5
Sample C Male 18.3
Sample D Male 19.3
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.9
Sample A Female 17.8
Sample B Female 19.8
Sample C Male 14.9
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 144.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 144.0
Samples: 4

Max nTPM: 159.0
Min nTPM: 137.2
Sample A Male 137.2
Sample B Male 159.0
Sample C Female 140.8
Sample D Female 139.0
Hippocampal formation
nTPM: 139.8
Samples: 4

Max nTPM: 158.3
Min nTPM: 133.0
Sample A Male 158.3
Sample B Male 133.6
Sample C Female 134.3
Sample D Female 133.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
393252 Antisense, RP_040809_01_A01, Mouse strain C57BL/6J (56 days, male) 14.9

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