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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MRPS15 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
290.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
236.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
229.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
208.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
193.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
191.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
188.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
185.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
184.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
181.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
170.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
164.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
160.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
159.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
157.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
156.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
155.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
147.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
146.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
146.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
145.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
145.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
144.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
143.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
142.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
142.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
142.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
140.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
139.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
137.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
137.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
137.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
137.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
134.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
134.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
133.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
132.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
132.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
131.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
130.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
130.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
130.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
129.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
128.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
128.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
128.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
127.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
127.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
127.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
126.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
126.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
126.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
124.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
124.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
124.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
123.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
123.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
123.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
122.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
122.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
122.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
122.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
121.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
121.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
121.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
120.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
119.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
119.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
119.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
119.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
119.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
118.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
117.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
117.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
117.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
116.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
116.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
115.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
114.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
114.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
114.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
114.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
114.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
114.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
113.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
113.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
113.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
112.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
112.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
111.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
111.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
111.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
111.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
111.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
110.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
110.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
109.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
108.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
108.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
108.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
108.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
108.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
108.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
108.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
108.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
107.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
107.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
107.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
106.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
106.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
106.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
106.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
106.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
106.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
105.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
105.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
104.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
104.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
104.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
104.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
103.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
103.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
103.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
103.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
102.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
102.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
102.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
102.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
101.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
101.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
101.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
101.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
101.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
100.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
100.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
100.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
99.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
98.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
98.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
98.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
97.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
97.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
97.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
97.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
97.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
96.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
96.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
96.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
95.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
95.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
95.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
95.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
94.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
94.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
94.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
94.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
94.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
93.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
93.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
93.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
92.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
92.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
92.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
92.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
92.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
91.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
91.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
91.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
91.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
90.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
90.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
89.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
89.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
89.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
89.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
88.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
88.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
88.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
88.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
88.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
88.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
88.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
88.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
87.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
87.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
87.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
87.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
87.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
86.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
86.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
86.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
86.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
86.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
86.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
86.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
86.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
85.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
85.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
85.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
85.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
85.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
85.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
84.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
84.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
84.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
84.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
84.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
84.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
83.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
83.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
83.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
83.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
83.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
83.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
83.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
83.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
83.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
83.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
82.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
82.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
82.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
82.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
81.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
81.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
81.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
81.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
80.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
80.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
80.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
80.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
80.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
79.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
79.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
78.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
78.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
77.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
77.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
77.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
77.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
77.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
77.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
77.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
77.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
76.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
76.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
76.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
75.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
75.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
75.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
75.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
74.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
74.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
73.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
73.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
72.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
72.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
72.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
71.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
71.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
71.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
70.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
70.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
70.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
69.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
69.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
69.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
69.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
69.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
68.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
67.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
67.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
67.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
67.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
66.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
66.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
66.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
66.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
66.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
66.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
65.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
65.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
65.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
65.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
65.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
64.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
64.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
63.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
63.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
63.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
63.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
63.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
63.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
63.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
63.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
62.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
62.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
62.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
61.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
61.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
60.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
60.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
60.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
60.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
59.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
59.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
59.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
58.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
57.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
57.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
57.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
57.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
57.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
57.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
56.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
55.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
55.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
55.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
55.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
55.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
54.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
54.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
54.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
53.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
53.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
53.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
53.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
53.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
52.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
52.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
52.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
51.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
51.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
51.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
51.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
50.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
49.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
49.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
49.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
48.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
48.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
48.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
47.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
47.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
47.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
46.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
46.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
44.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
44.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
44.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
43.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
43.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
42.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
42.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
42.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
41.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
40.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
37.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
37.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
35.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
35.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MRPS15 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.6
Number of samples
231
Samples
Sample
Description
TPM
DO50845
0 years, male, NA, stage:3, alive, 210 days
303.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
301.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
295.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
215.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
212.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
209.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
196.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
181.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
180.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
179.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
177.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
169.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
167.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
156.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
151.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
147.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
147.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
143.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
142.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
140.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
139.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
137.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
135.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
133.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
133.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
131.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
131.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
128.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
126.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
126.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
122.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
122.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
118.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
117.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
116.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
116.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
115.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
113.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
113.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
112.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
111.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
110.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
110.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
109.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
109.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
109.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
108.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
108.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
108.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
107.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
106.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
106.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
105.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
104.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
103.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
102.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
102.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
102.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
102.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
101.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
100.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
99.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
99.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
98.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
98.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
98.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
96.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
96.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
96.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
95.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
95.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
95.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
95.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
95.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
95.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
93.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
92.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
92.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
91.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
91.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
90.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
89.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
89.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
89.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
88.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
88.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
88.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
88.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
87.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
87.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
87.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
86.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
86.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
85.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
85.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
84.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
84.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
84.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
84.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
83.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
82.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
82.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
81.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
81.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
80.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
80.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
79.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
79.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
78.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
77.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
77.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
77.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
77.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
77.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
76.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
76.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
75.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
75.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
74.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
72.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
72.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
71.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
71.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
71.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
71.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
71.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
70.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
70.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
70.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
70.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
69.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
69.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
69.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
68.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
67.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
67.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
67.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
67.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
67.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
67.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
66.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
66.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
65.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
64.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
64.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
64.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
64.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
63.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
63.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
63.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
62.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
62.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
61.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
61.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
60.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
60.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
60.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
60.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
59.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
59.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
58.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
58.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
58.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
58.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
58.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
57.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
57.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
57.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
57.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
57.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
57.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
56.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
56.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
55.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
54.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
54.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
54.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
53.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
53.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
53.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
53.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
52.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
51.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
51.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
51.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
51.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
51.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
51.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
50.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
50.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
50.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
50.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
49.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
49.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
48.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
48.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
47.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
47.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
47.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
47.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
46.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
44.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
44.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
44.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
44.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
44.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
43.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
42.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
42.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
42.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
41.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
40.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
40.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
38.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
38.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
37.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
35.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
35.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
35.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
35.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
33.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
31.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
31.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
30.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
29.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
28.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
26.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
26.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
25.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
14.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
473
Tumor
1.8
411
Tumor
1.5
435
Tumor
1.2
967
Tumor
1.1
537
Tumor
1.1
957
Tumor
1.0
1041
Tumor
1.0
227
Tumor
1.0
865
Tumor
1.0
231
Tumor
1.0
477
Tumor
1.0
557
Tumor
0.9
965
Tumor
0.9
361
Tumor
0.9
553
Tumor
0.9
525
Tumor
0.9
1013
Tumor
0.8
713
Tumor
0.8
533
Tumor
0.8
483
Tumor
0.8
571
Tumor
0.8
951
Tumor
0.8
423
Tumor
0.8
393
Tumor
0.7
861
Tumor
0.7
357
Tumor
0.7
355
Tumor
0.7
363
Tumor
0.7
1025
Tumor
0.7
685
Tumor
0.7
823
Tumor
0.6
741
Tumor
0.6
567
Tumor
0.6
981
Tumor
0.6
663
Tumor
0.6
953
Tumor
0.6
427
Tumor
0.6
883
Tumor
0.6
327
Tumor
0.6
695
Tumor
0.6
1021
Tumor
0.6
745
Tumor
0.6
171
Tumor
0.6
367
Tumor
0.5
497
Tumor
0.5
123
Tumor
0.5
915
Tumor
0.5
257
Tumor
0.5
351
Tumor
0.5
665
Tumor
0.5
977
Tumor
0.5
913
Tumor
0.5
145
Tumor
0.5
267
Tumor
0.5
867
Tumor
0.5
743
Tumor
0.4
271
Tumor
0.4
983
Tumor
0.4
465
Tumor
0.4
877
Tumor
0.4
365
Tumor
0.3
715
Tumor
0.3
353
Tumor
0.3
963
Tumor
0.3
147
Tumor
0.3
221
Tumor
0.3
223
Tumor
0.3
331
Tumor
0.3
724
Normal
0.3
1031
Tumor
0.3
491
Tumor
0.3
195
Tumor
0.3
127
Tumor
0.3
313
Tumor
0.3
755
Tumor
0.3
937
Tumor
0.3
387
Tumor
0.2
641
Tumor
0.2
647
Tumor
0.2
413
Tumor
0.2
493
Tumor
0.2
395
Tumor
0.2
131
Tumor
0.2
277
Tumor
0.2
471
Tumor
0.2
923
Tumor
0.2
573
Tumor
0.2
635
Tumor
0.2
727
Tumor
0.2
517
Tumor
0.2
467
Tumor
0.2
523
Tumor
0.2
487
Tumor
0.2
431
Tumor
0.2
433
Tumor
0.2
514
Normal
0.1
721
Tumor
0.1
881
Tumor
0.1
213
Tumor
0.1
187
Tumor
0.1
526
Normal
0.1
385
Tumor
0.1
516
Normal
0.1
451
Tumor
0.1
463
Tumor
0.1
851
Tumor
0.1
527
Tumor
0.1
815
Tumor
0.1
697
Tumor
0.1
911
Tumor
0.1
671
Tumor
0.1
1014
Normal
0.0
926
Normal
0.0
297
Tumor
0.0
858
Normal
0.0
964
Normal
0.0
375
Tumor
0.0
484
Normal
0.0
616
Normal
0.0
416
Normal
0.0
436
Normal
0.0
285
Tumor
0.0
481
Tumor
0.0
857
Tumor
0.0
728
Normal
0.0
696
Normal
0.0
112
Tumor
0.0
944
Normal
0.0
356
Normal
0.0
617
Tumor
0.0
1043
Tumor
0.0
482
Normal
0.0
528
Normal
-0.1
1042
Normal
-0.1
328
Normal
-0.1
554
Normal
-0.1
958
Normal
-0.1
474
Normal
-0.1
534
Normal
-0.1
777
Tumor
-0.1
228
Normal
-0.1
518
Normal
-0.1
364
Normal
-0.1
272
Normal
-0.1
141
Tumor
-0.1
545
Tumor
-0.1
661
Tumor
-0.1
723
Tumor
-0.1
615
Tumor
-0.1
261
Tumor
-0.1
546
Normal
-0.1
136
Normal
-0.1
466
Normal
-0.1
824
Normal
-0.1
785
Tumor
-0.1
912
Normal
-0.1
132
Normal
-0.1
564
Normal
-0.1
488
Normal
-0.1
738
Normal
-0.1
956
Normal
-0.1
982
Normal
-0.2
462
Normal
-0.2
916
Normal
-0.2
572
Normal
-0.2
212
Normal
-0.2
284
Normal
-0.2
258
Normal
-0.2
817
Tumor
-0.2
1032
Normal
-0.2
447
Tumor
-0.2
978
Normal
-0.2
135
Tumor
-0.2
756
Normal
-0.2
432
Normal
-0.2
415
Tumor
-0.2
211
Tumor
-0.2
642
Normal
-0.2
188
Normal
-0.2
868
Normal
-0.2
113
Tumor
-0.2
866
Normal
-0.2
494
Normal
-0.2
1022
Normal
-0.2
472
Normal
-0.2
391
Tumor
-0.2
722
Normal
-0.2
191
Tumor
-0.2
975
Tumor
-0.2
148
Normal
-0.2
1015
Tumor
-0.2
535
Tumor
-0.2
952
Normal
-0.2
383
Tumor
-0.2
196
Normal
-0.2
341
Tumor
-0.2
1046
Normal
-0.2
312
Normal
-0.2
498
Normal
-0.2
412
Normal
-0.2
278
Normal
-0.2
513
Tumor
-0.3
914
Normal
-0.3
428
Normal
-0.3
862
Normal
-0.3
1026
Normal
-0.3
524
Normal
-0.3
943
Tumor
-0.3
464
Normal
-0.3
864
Normal
-0.3
873
Tumor
-0.3
446
Normal
-0.3
161
Tumor
-0.3
698
Normal
-0.3
1016
Normal
-0.3
232
Normal
-0.3
128
Normal
-0.3
742
Normal
-0.3
918
Normal
-0.3
778
Normal
-0.3
648
Normal
-0.3
816
Normal
-0.3
954
Normal
-0.3
434
Normal
-0.3
628
Normal
-0.3
448
Normal
-0.3
636
Normal
-0.3
878
Normal
-0.3
298
Normal
-0.3
224
Normal
-0.3
618
Normal
-0.3
358
Normal
-0.3
714
Normal
-0.3
286
Normal
-0.3
114
Normal
-0.3
955
Tumor
-0.3
786
Normal
-0.3
362
Normal
-0.4
125
Tumor
-0.4
222
Normal
-0.4
686
Normal
-0.4
874
Normal
-0.4
388
Normal
-0.4
1028
Normal
-0.4
314
Normal
-0.4
311
Tumor
-0.4
461
Tumor
-0.4
172
Normal
-0.4
456
Normal
-0.4
162
Normal
-0.4
664
Normal
-0.4
214
Normal
-0.4
818
Normal
-0.4
922
Normal
-0.4
882
Normal
-0.4
568
Normal
-0.4
422
Normal
-0.4
268
Normal
-0.4
976
Normal
-0.4
425
Tumor
-0.4
666
Normal
-0.4
925
Tumor
-0.4
716
Normal
-0.4
468
Normal
-0.4
1045
Tumor
-0.4
111
Normal
-0.4
424
Normal
-0.4
142
Normal
-0.4
558
Normal
-0.4
478
Normal
-0.4
574
Normal
-0.4
366
Normal
-0.4
444
Normal
-0.4
917
Tumor
-0.4
138
Normal
-0.5
283
Tumor
-0.5
396
Normal
-0.5
966
Normal
-0.5
455
Tumor
-0.5
884
Normal
-0.5
984
Normal
-0.5
376
Normal
-0.5
126
Normal
-0.5
185
Tumor
-0.5
426
Normal
-0.5
968
Normal
-0.5
137
Tumor
-0.5
146
Normal
-0.5
746
Normal
-0.5
737
Tumor
-0.5
852
Normal
-0.5
445
Tumor
-0.5
452
Normal
-0.5
538
Normal
-0.5
386
Normal
-0.5
662
Normal
-0.6
492
Normal
-0.6
217
Tumor
-0.6
343
Tumor
-0.6
1044
Normal
-0.6
515
Tumor
-0.6
368
Normal
-0.6
938
Normal
-0.6
536
Normal
-0.6
394
Normal
-0.6
627
Tumor
-0.6
563
Tumor
-0.6
392
Normal
-0.6
414
Normal
-0.6
384
Normal
-0.6
924
Normal
-0.6
124
Normal
-0.6
262
Normal
-0.6
443
Tumor
-0.7
332
Normal
-0.7
352
Normal
-0.7
354
Normal
-0.7
814
Normal
-0.7
813
Tumor
-0.7
192
Normal
-0.7
421
Tumor
-0.8
344
Normal
-0.8
342
Normal
-0.8
186
Normal
-0.8
1027
Tumor
-0.8
218
Normal
-0.8
863
Tumor
-0.9
672
Normal
-0.9
744
Normal
-1.0
921
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
