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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSCP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
10.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
4.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSCP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
40.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
25.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
21.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
18.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
18.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
12.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
12.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
9.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
8.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
8.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
8.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
7.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
7.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
7.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
7.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
7.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
6.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
6.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
6.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
6.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
6.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
6.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
4.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
4.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
4.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
3.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
3.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSCP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
21.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
17.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
15.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
14.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
14.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
14.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
11.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
9.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
8.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
8.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
8.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
8.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
7.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
6.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
6.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
5.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
4.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
3.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OSCP1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
56.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
49.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
46.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
41.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
38.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
37.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
37.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
34.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
33.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
33.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
30.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
30.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
30.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
29.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
27.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
27.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
27.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
27.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
27.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
26.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
26.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
26.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
25.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
25.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
23.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
23.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
22.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
22.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
21.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
20.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
19.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
18.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
17.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
15.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
14.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
13.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
10.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
9.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
5.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
5.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
1.2
CPT0011410003
Tumor
1.0
CPT0000870016
Tumor
0.8
CPT0078830003
Tumor
0.7
CPT0079230003
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0001500009
Tumor
0.7
CPT0077110003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0001220008
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0025350003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0065930003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0015810003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0001350001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0012670003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0069190001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0079430001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0007470001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0025170003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0077140001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0001260009
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0086970003
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0077320001
Normal
-0.4
CPT0065690003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0012180003
Tumor
-0.5
CPT0001190001
Normal
-0.6
CPT0081880003
Tumor
-0.6
CPT0088690003
Tumor
-0.7
CPT0012550003
Tumor
-0.8
CPT0088970003
Tumor
-0.9
CPT0001340003
Tumor
-0.9
CPT0079180003
Tumor
-0.9
CPT0078660003
Tumor
-1.1
CPT0088550004
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
