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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFHR3 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
604.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
553.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
521.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
511.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
481.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
476.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
474.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
411.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
398.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
367.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
333.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
329.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
327.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
317.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
315.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
310.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
303.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
282.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
265.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
262.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
253.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
238.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
219.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
217.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
210.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
208.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
206.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
201.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
199.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
192.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
189.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
187.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
184.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
181.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
179.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
171.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
170.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
165.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
160.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
158.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
157.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
157.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
154.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
153.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
152.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
148.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
145.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
143.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
138.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
136.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
134.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
129.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
127.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
127.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
126.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
120.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
120.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
120.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
119.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
118.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
117.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
115.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
113.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
111.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
110.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
110.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
110.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
109.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
106.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
106.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
104.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
102.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
102.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
102.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
102.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
100.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
95.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
94.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
91.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
87.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
84.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
80.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
79.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
78.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
77.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
75.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
73.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
73.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
72.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
72.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
70.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
65.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
65.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
65.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
65.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
63.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
61.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
61.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
61.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
60.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
60.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
60.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
60.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
59.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
58.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
56.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
56.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
56.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
55.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
55.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
54.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
54.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
54.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
54.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
53.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
53.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
52.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
51.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
51.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
51.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
51.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
50.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
50.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
50.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
50.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
49.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
49.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
49.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
48.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
47.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
46.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
46.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
45.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
45.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
45.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
43.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
43.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
43.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
42.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
41.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
41.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
41.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
41.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
39.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
38.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
38.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
37.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
37.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
36.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
36.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
36.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
36.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
35.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
35.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
35.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
34.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
34.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
34.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
33.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
33.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
32.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
32.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
32.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
31.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
31.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
29.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
29.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
29.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
28.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
27.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
27.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
26.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
26.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
26.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
25.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
25.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
25.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
25.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
25.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
25.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
24.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
24.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
23.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
22.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
21.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
21.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
20.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
20.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
20.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
19.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
19.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
19.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
19.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
17.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
17.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
17.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
16.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
16.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
16.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
16.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
15.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
15.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
14.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
14.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
14.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
13.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
13.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
12.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
10.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
10.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
9.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
6.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
4.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
3.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
3.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
2.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFHR3 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
79.4
Number of samples
231
Samples
Sample
Description
TPM
DO50822
0 years, male, NA, stage:2, alive, 510 days
801.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
583.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
504.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
452.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
440.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
395.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
338.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
335.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
322.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
315.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
303.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
301.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
286.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
279.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
276.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
271.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
267.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
260.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
258.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
249.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
220.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
216.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
215.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
214.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
206.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
202.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
195.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
191.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
190.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
189.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
184.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
183.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
183.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
175.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
173.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
169.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
168.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
165.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
162.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
161.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
155.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
153.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
147.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
146.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
146.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
141.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
139.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
134.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
134.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
126.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
125.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
124.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
116.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
112.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
107.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
107.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
106.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
106.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
105.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
105.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
99.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
99.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
97.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
96.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
94.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
92.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
92.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
91.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
91.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
87.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
87.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
85.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
85.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
85.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
84.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
81.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
81.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
80.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
79.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
77.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
71.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
69.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
69.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
68.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
65.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
64.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
63.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
62.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
60.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
59.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
59.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
57.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
57.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
57.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
55.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
53.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
52.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
49.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
49.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
49.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
48.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
47.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
46.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
46.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
46.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
42.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
42.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
40.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
39.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
39.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
39.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
39.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
38.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
38.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
37.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
36.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
36.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
35.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
35.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
32.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
31.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
30.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
30.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
29.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
29.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
27.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
27.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
26.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
24.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
23.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
23.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
22.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
21.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
19.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
18.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
18.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
18.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
17.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
16.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
13.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
7.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
6.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
4.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
4.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
3.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
3.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
2.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
1.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
1.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
1.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
1.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
1.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
1.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
1.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
1.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
0.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
981
Tumor
2.0
963
Tumor
1.9
392
Normal
1.9
778
Normal
1.6
557
Tumor
1.5
474
Normal
1.4
728
Normal
1.4
642
Normal
1.3
866
Normal
1.3
368
Normal
1.3
1026
Normal
1.3
696
Normal
1.2
636
Normal
1.2
816
Normal
1.2
937
Tumor
1.2
528
Normal
1.1
267
Tumor
1.1
376
Normal
1.1
878
Normal
1.1
327
Tumor
1.1
744
Normal
1.0
344
Normal
1.0
918
Normal
1.0
232
Normal
1.0
481
Tumor
1.0
982
Normal
0.8
286
Normal
0.8
162
Normal
0.8
662
Normal
0.8
191
Tumor
0.8
111
Normal
0.7
738
Normal
0.7
554
Normal
0.7
467
Tumor
0.7
518
Normal
0.7
882
Normal
0.7
865
Tumor
0.6
723
Tumor
0.6
136
Normal
0.6
128
Normal
0.6
968
Normal
0.5
716
Normal
0.5
138
Normal
0.5
526
Normal
0.5
746
Normal
0.5
515
Tumor
0.5
976
Normal
0.5
546
Normal
0.5
1016
Normal
0.5
192
Normal
0.5
314
Normal
0.4
436
Normal
0.4
124
Normal
0.4
448
Normal
0.4
466
Normal
0.4
352
Normal
0.4
468
Normal
0.3
672
Normal
0.3
473
Tumor
0.3
394
Normal
0.3
186
Normal
0.3
497
Tumor
0.3
536
Normal
0.3
332
Normal
0.3
393
Tumor
0.3
426
Normal
0.3
926
Normal
0.3
114
Normal
0.3
257
Tumor
0.3
443
Tumor
0.3
922
Normal
0.3
484
Normal
0.3
278
Normal
0.2
862
Normal
0.2
966
Normal
0.2
342
Normal
0.2
618
Normal
0.2
924
Normal
0.2
1015
Tumor
0.2
386
Normal
0.2
1041
Tumor
0.2
172
Normal
0.2
258
Normal
0.2
698
Normal
0.2
524
Normal
0.1
1044
Normal
0.1
494
Normal
0.1
558
Normal
0.1
912
Normal
0.1
461
Tumor
0.1
113
Tumor
0.1
135
Tumor
0.1
666
Normal
0.1
534
Normal
0.1
452
Normal
0.1
964
Normal
0.1
628
Normal
0.1
756
Normal
0.1
714
Normal
0.1
214
Normal
0.1
284
Normal
0.1
944
Normal
0.1
864
Normal
0.1
742
Normal
0.0
938
Normal
0.0
414
Normal
0.0
146
Normal
0.0
874
Normal
0.0
517
Tumor
0.0
444
Normal
0.0
212
Normal
0.0
1042
Normal
0.0
456
Normal
0.0
514
Normal
0.0
664
Normal
0.0
433
Tumor
0.0
261
Tumor
0.0
277
Tumor
0.0
132
Normal
0.0
568
Normal
0.0
1022
Normal
0.0
858
Normal
-0.1
268
Normal
-0.1
145
Tumor
-0.1
343
Tumor
-0.1
823
Tumor
-0.1
861
Tumor
-0.1
917
Tumor
-0.1
873
Tumor
-0.1
958
Normal
-0.2
857
Tumor
-0.2
498
Normal
-0.2
298
Normal
-0.2
977
Tumor
-0.2
462
Normal
-0.2
185
Tumor
-0.2
428
Normal
-0.2
852
Normal
-0.2
877
Tumor
-0.2
388
Normal
-0.2
572
Normal
-0.2
516
Normal
-0.2
328
Normal
-0.2
137
Tumor
-0.3
978
Normal
-0.3
384
Normal
-0.3
434
Normal
-0.3
755
Tumor
-0.3
312
Normal
-0.3
313
Tumor
-0.3
366
Normal
-0.3
482
Normal
-0.3
1025
Tumor
-0.3
1014
Normal
-0.3
615
Tumor
-0.3
262
Normal
-0.4
364
Normal
-0.4
126
Normal
-0.4
142
Normal
-0.4
616
Normal
-0.4
695
Tumor
-0.4
356
Normal
-0.4
523
Tumor
-0.4
1032
Normal
-0.5
311
Tumor
-0.5
297
Tumor
-0.5
396
Normal
-0.5
375
Tumor
-0.5
911
Tumor
-0.5
425
Tumor
-0.5
188
Normal
-0.5
213
Tumor
-0.5
671
Tumor
-0.5
952
Normal
-0.5
727
Tumor
-0.6
331
Tumor
-0.6
148
Normal
-0.6
431
Tumor
-0.6
818
Normal
-0.6
195
Tumor
-0.6
161
Tumor
-0.6
218
Normal
-0.6
665
Tumor
-0.7
786
Normal
-0.7
721
Tumor
-0.7
884
Normal
-0.7
228
Normal
-0.7
724
Normal
-0.7
574
Normal
-0.7
365
Tumor
-0.8
863
Tumor
-0.8
1046
Normal
-0.8
488
Normal
-0.8
391
Tumor
-0.8
538
Normal
-0.8
648
Normal
-0.8
881
Tumor
-0.8
527
Tumor
-0.8
465
Tumor
-0.8
412
Normal
-0.8
867
Tumor
-0.8
571
Tumor
-0.8
777
Tumor
-0.8
647
Tumor
-0.8
112
Tumor
-0.9
956
Normal
-0.9
564
Normal
-0.9
447
Tumor
-0.9
141
Tumor
-0.9
563
Tumor
-0.9
147
Tumor
-0.9
525
Tumor
-0.9
222
Normal
-0.9
955
Tumor
-0.9
353
Tumor
-0.9
914
Normal
-0.9
663
Tumor
-1.0
567
Tumor
-1.0
785
Tumor
-1.0
272
Normal
-1.0
196
Normal
-1.0
715
Tumor
-1.0
868
Normal
-1.0
451
Tumor
-1.0
217
Tumor
-1.0
722
Normal
-1.0
697
Tumor
-1.0
361
Tumor
-1.0
492
Normal
-1.1
224
Normal
-1.1
355
Tumor
-1.1
187
Tumor
-1.1
1045
Tumor
-1.1
383
Tumor
-1.1
975
Tumor
-1.1
422
Normal
-1.1
1028
Normal
-1.1
984
Normal
-1.1
432
Normal
-1.1
573
Tumor
-1.1
472
Normal
-1.1
354
Normal
-1.1
686
Normal
-1.2
283
Tumor
-1.2
416
Normal
-1.2
493
Tumor
-1.2
916
Normal
-1.2
423
Tumor
-1.2
367
Tumor
-1.2
395
Tumor
-1.2
1043
Tumor
-1.2
635
Tumor
-1.2
824
Normal
-1.2
627
Tumor
-1.2
446
Normal
-1.3
415
Tumor
-1.3
445
Tumor
-1.3
915
Tumor
-1.3
513
Tumor
-1.3
851
Tumor
-1.3
943
Tumor
-1.3
221
Tumor
-1.3
427
Tumor
-1.3
231
Tumor
-1.3
285
Tumor
-1.3
421
Tumor
-1.3
813
Tumor
-1.3
464
Normal
-1.3
713
Tumor
-1.3
737
Tumor
-1.3
954
Normal
-1.3
131
Tumor
-1.4
817
Tumor
-1.4
455
Tumor
-1.4
814
Normal
-1.4
362
Normal
-1.4
1013
Tumor
-1.4
424
Normal
-1.4
483
Tumor
-1.4
883
Tumor
-1.5
358
Normal
-1.5
223
Tumor
-1.5
363
Tumor
-1.5
553
Tumor
-1.5
491
Tumor
-1.5
463
Tumor
-1.5
127
Tumor
-1.5
957
Tumor
-1.5
617
Tumor
-1.5
745
Tumor
-1.5
271
Tumor
-1.5
435
Tumor
-1.6
211
Tumor
-1.6
487
Tumor
-1.6
913
Tumor
-1.6
815
Tumor
-1.6
641
Tumor
-1.6
341
Tumor
-1.6
1027
Tumor
-1.6
535
Tumor
-1.6
385
Tumor
-1.6
478
Normal
-1.6
125
Tumor
-1.6
741
Tumor
-1.6
661
Tumor
-1.7
925
Tumor
-1.7
923
Tumor
-1.7
123
Tumor
-1.7
965
Tumor
-1.7
171
Tumor
-1.7
387
Tumor
-1.7
413
Tumor
-1.7
227
Tumor
-1.8
533
Tumor
-1.8
1021
Tumor
-1.8
545
Tumor
-1.8
1031
Tumor
-1.9
351
Tumor
-1.9
357
Tumor
-1.9
983
Tumor
-2.0
411
Tumor
-2.0
921
Tumor
-2.0
471
Tumor
-2.0
967
Tumor
-2.1
953
Tumor
-2.1
743
Tumor
-2.1
477
Tumor
-2.1
685
Tumor
-2.2
537
Tumor
-2.2
951
Tumor
-2.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.