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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MFN2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
83.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
47.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
45.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
44.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
44.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
44.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
44.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
43.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
41.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
40.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
40.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
37.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
36.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
36.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
36.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
35.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
34.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
34.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
33.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
33.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
32.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
32.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
32.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
32.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
31.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
30.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
29.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
29.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
28.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
28.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
28.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
28.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
28.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
27.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
27.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
26.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
26.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
25.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
25.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
25.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
24.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
24.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
24.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
24.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
24.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
23.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
23.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
23.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
23.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
22.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
22.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
22.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
22.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
22.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
22.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
21.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
21.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
21.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
20.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
20.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
20.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
20.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
19.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
19.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
18.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
18.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
18.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
18.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
18.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
18.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
18.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
18.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
17.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
17.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
17.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
17.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
16.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
16.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
16.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
16.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
16.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
16.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
15.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
15.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
15.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
14.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
14.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
14.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
14.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
13.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
13.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
13.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
13.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
12.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
12.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
12.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
11.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
11.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
11.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
10.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
9.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
8.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
5.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
3.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MFN2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.2
Number of samples
231
Samples
Sample
Description
TPM
DO50844
0 years, male, NA, stage:4, alive, 300 days
76.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
74.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
68.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
67.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
61.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
57.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
56.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
56.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
55.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
55.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
55.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
54.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
54.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
52.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
50.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
50.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
49.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
47.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
47.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
46.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
46.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
46.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
45.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
44.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
42.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
41.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
40.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
40.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
39.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
38.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
38.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
38.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
35.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
35.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
35.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
35.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
35.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
35.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
35.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
35.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
34.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
34.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
34.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
34.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
34.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
34.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
34.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
34.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
33.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
33.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
33.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
33.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
32.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
32.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
32.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
32.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
32.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
31.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
31.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
31.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
31.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
31.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
30.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
30.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
30.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
29.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
29.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
29.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
29.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
29.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
29.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
29.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
28.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
28.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
28.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
28.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
28.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
28.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
28.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
28.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
28.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
27.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
27.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
27.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
27.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
27.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
27.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
26.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
26.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
26.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
26.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
26.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
26.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
26.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
26.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
26.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
25.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
25.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
25.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
25.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
25.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
25.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
24.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
24.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
24.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
24.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
24.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
24.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
24.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
24.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
24.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
24.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
24.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
23.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
23.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
23.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
23.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
23.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
23.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
23.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
23.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
22.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
22.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
22.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
22.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
22.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
21.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
21.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
21.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
21.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
21.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
21.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
20.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
20.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
20.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
20.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
20.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
20.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
19.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
18.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
18.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
18.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
18.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
18.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
18.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
17.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
17.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
17.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
17.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
17.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
17.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
16.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
16.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
16.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
16.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
16.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
16.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
15.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
15.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
15.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
15.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
14.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
14.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
14.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
13.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
13.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
13.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
13.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
12.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
12.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
12.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
9.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
571
Tumor
1.1
341
Tumor
0.9
487
Tumor
0.9
727
Tumor
0.8
981
Tumor
0.8
231
Tumor
0.7
423
Tumor
0.7
465
Tumor
0.7
925
Tumor
0.6
615
Tumor
0.6
431
Tumor
0.6
741
Tumor
0.6
867
Tumor
0.6
491
Tumor
0.6
1045
Tumor
0.6
123
Tumor
0.5
1015
Tumor
0.5
965
Tumor
0.5
915
Tumor
0.5
1041
Tumor
0.5
1013
Tumor
0.4
313
Tumor
0.4
635
Tumor
0.4
627
Tumor
0.4
922
Normal
0.4
473
Tumor
0.4
513
Tumor
0.4
477
Tumor
0.4
685
Tumor
0.4
967
Tumor
0.4
1025
Tumor
0.4
695
Tumor
0.3
443
Tumor
0.3
636
Normal
0.3
484
Normal
0.3
127
Tumor
0.3
278
Normal
0.3
923
Tumor
0.3
171
Tumor
0.3
525
Tumor
0.3
361
Tumor
0.3
435
Tumor
0.3
665
Tumor
0.3
128
Normal
0.3
554
Normal
0.3
448
Normal
0.3
526
Normal
0.3
387
Tumor
0.3
572
Normal
0.3
755
Tumor
0.3
568
Normal
0.3
436
Normal
0.2
663
Tumor
0.2
518
Normal
0.2
494
Normal
0.2
686
Normal
0.2
865
Tumor
0.2
557
Tumor
0.2
862
Normal
0.2
342
Normal
0.2
232
Normal
0.2
196
Normal
0.2
314
Normal
0.2
964
Normal
0.2
861
Tumor
0.2
267
Tumor
0.2
261
Tumor
0.2
356
Normal
0.2
823
Tumor
0.2
944
Normal
0.2
696
Normal
0.2
955
Tumor
0.2
1014
Normal
0.2
516
Normal
0.2
912
Normal
0.2
524
Normal
0.2
698
Normal
0.2
742
Normal
0.2
873
Tumor
0.2
564
Normal
0.2
882
Normal
0.2
553
Tumor
0.2
328
Normal
0.2
938
Normal
0.2
344
Normal
0.2
616
Normal
0.2
738
Normal
0.2
558
Normal
0.2
666
Normal
0.2
534
Normal
0.2
926
Normal
0.2
1032
Normal
0.2
114
Normal
0.2
298
Normal
0.2
472
Normal
0.2
258
Normal
0.2
745
Tumor
0.2
445
Tumor
0.2
746
Normal
0.2
515
Tumor
0.2
383
Tumor
0.2
956
Normal
0.1
412
Normal
0.1
368
Normal
0.1
351
Tumor
0.1
868
Normal
0.1
573
Tumor
0.1
488
Normal
0.1
161
Tumor
0.1
376
Normal
0.1
982
Normal
0.1
858
Normal
0.1
228
Normal
0.1
353
Tumor
0.1
433
Tumor
0.1
1026
Normal
0.1
416
Normal
0.1
642
Normal
0.1
451
Tumor
0.1
222
Normal
0.1
227
Tumor
0.1
722
Normal
0.1
728
Normal
0.1
954
Normal
0.1
428
Normal
0.1
546
Normal
0.1
138
Normal
0.1
257
Tumor
0.1
483
Tumor
0.1
414
Normal
0.1
628
Normal
0.1
422
Normal
0.1
464
Normal
0.1
1046
Normal
0.1
864
Normal
0.1
446
Normal
0.1
924
Normal
0.1
124
Normal
0.1
286
Normal
0.1
365
Tumor
0.1
514
Normal
0.1
112
Tumor
0.1
574
Normal
0.1
958
Normal
0.1
517
Tumor
0.1
618
Normal
0.1
664
Normal
0.1
1027
Tumor
0.1
358
Normal
0.1
212
Normal
0.1
332
Normal
0.1
214
Normal
0.1
142
Normal
0.1
415
Tumor
0.1
778
Normal
0.1
462
Normal
0.1
388
Normal
0.1
474
Normal
0.1
492
Normal
0.1
111
Normal
0.1
878
Normal
0.1
132
Normal
0.1
984
Normal
0.1
911
Tumor
0.1
824
Normal
0.1
354
Normal
0.0
1031
Tumor
0.0
426
Normal
0.0
411
Tumor
0.0
364
Normal
0.0
481
Tumor
0.0
723
Tumor
0.0
148
Normal
0.0
866
Normal
0.0
648
Normal
0.0
424
Normal
0.0
172
Normal
0.0
185
Tumor
0.0
366
Normal
0.0
952
Normal
0.0
1016
Normal
0.0
396
Normal
0.0
137
Tumor
0.0
714
Normal
0.0
218
Normal
0.0
1028
Normal
0.0
914
Normal
0.0
362
Normal
0.0
482
Normal
0.0
966
Normal
0.0
563
Tumor
0.0
352
Normal
0.0
716
Normal
0.0
852
Normal
0.0
1022
Normal
0.0
392
Normal
0.0
468
Normal
0.0
262
Normal
0.0
662
Normal
0.0
937
Tumor
0.0
713
Tumor
0.0
1021
Tumor
0.0
951
Tumor
0.0
162
Normal
0.0
452
Normal
0.0
284
Normal
0.0
327
Tumor
0.0
786
Normal
0.0
493
Tumor
0.0
136
Normal
0.0
818
Normal
0.0
816
Normal
0.0
916
Normal
0.0
883
Tumor
0.0
918
Normal
0.0
744
Normal
0.0
141
Tumor
0.0
186
Normal
0.0
672
Normal
0.0
432
Normal
0.0
1042
Normal
0.0
968
Normal
0.0
135
Tumor
0.0
394
Normal
0.0
697
Tumor
0.0
884
Normal
0.0
756
Normal
-0.1
466
Normal
-0.1
724
Normal
-0.1
312
Normal
-0.1
224
Normal
-0.1
785
Tumor
-0.1
641
Tumor
-0.1
976
Normal
-0.1
146
Normal
-0.1
536
Normal
-0.1
268
Normal
-0.1
528
Normal
-0.1
384
Normal
-0.1
126
Normal
-0.1
537
Tumor
-0.1
113
Tumor
-0.1
272
Normal
-0.1
456
Normal
-0.1
393
Tumor
-0.1
187
Tumor
-0.1
461
Tumor
-0.2
1044
Normal
-0.2
213
Tumor
-0.2
913
Tumor
-0.2
978
Normal
-0.2
277
Tumor
-0.2
498
Normal
-0.2
963
Tumor
-0.2
533
Tumor
-0.2
188
Normal
-0.2
874
Normal
-0.2
953
Tumor
-0.2
857
Tumor
-0.2
715
Tumor
-0.2
1043
Tumor
-0.2
813
Tumor
-0.2
386
Normal
-0.2
478
Normal
-0.2
217
Tumor
-0.2
195
Tumor
-0.2
221
Tumor
-0.2
538
Normal
-0.2
943
Tumor
-0.2
671
Tumor
-0.2
434
Normal
-0.2
375
Tumor
-0.2
567
Tumor
-0.2
395
Tumor
-0.2
331
Tumor
-0.2
444
Normal
-0.2
977
Tumor
-0.3
425
Tumor
-0.3
145
Tumor
-0.3
367
Tumor
-0.3
497
Tumor
-0.3
661
Tumor
-0.3
355
Tumor
-0.3
357
Tumor
-0.3
877
Tumor
-0.3
721
Tumor
-0.3
427
Tumor
-0.3
363
Tumor
-0.3
297
Tumor
-0.3
817
Tumor
-0.3
527
Tumor
-0.3
737
Tumor
-0.3
223
Tumor
-0.3
471
Tumor
-0.4
455
Tumor
-0.4
814
Normal
-0.4
192
Normal
-0.4
743
Tumor
-0.4
271
Tumor
-0.4
467
Tumor
-0.4
147
Tumor
-0.4
447
Tumor
-0.4
863
Tumor
-0.4
463
Tumor
-0.4
413
Tumor
-0.4
957
Tumor
-0.4
647
Tumor
-0.5
815
Tumor
-0.5
777
Tumor
-0.5
535
Tumor
-0.5
617
Tumor
-0.5
421
Tumor
-0.5
125
Tumor
-0.5
191
Tumor
-0.5
283
Tumor
-0.5
975
Tumor
-0.6
523
Tumor
-0.6
311
Tumor
-0.6
881
Tumor
-0.6
921
Tumor
-0.6
851
Tumor
-0.6
391
Tumor
-0.6
545
Tumor
-0.6
385
Tumor
-0.7
285
Tumor
-0.7
343
Tumor
-0.7
983
Tumor
-0.7
917
Tumor
-0.8
211
Tumor
-0.8
131
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
