HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:57.6 nTPM
HPA Brain:95.8 nTPM
GTEx:57.6 nTPM
FANTOM5:79.3 Scaled Tags Per Million
Pig:81.1 nTPM
Mouse:97.8 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043437
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.8
Sample id Sample description nTPM
Hippocampus
nTPM: 81.8
2529 Female, age 94, left hemisphere 89.8
2621 Female, age 67, right hemisphere 89.4
1911 Female, age 85, right hemisphere 88.5
1855 Male, age 76, left hemisphere 78.3
1898 Male, age 80, left hemisphere 73.1
2148 Female, age 91, left hemisphere 71.9
Dentate gyrus
nTPM: 80.1
2530 Female, age 94, left hemisphere 115.2
2531 Female, age 67, both hemispheres 86.2
2246 Female, age 85, both hemispheres 78.6
2010 Male, age 76, both hemispheres 77.5
1927 Female, age 91, both hemispheres 63.2
2528 Male, age 74, both hemispheres 59.8
Entorhinal gyrus
nTPM: 95.3
2613 Female, age 94, left hemisphere 110.1
2764 Male, age 80, right hemisphere 103.3
1787 Male, age 76, left hemisphere 102.0
2117 Female, age 91, right hemisphere 92.6
1938 Female, age 85, left hemisphere 84.1
2686 Male, age 75, right hemisphere 79.5
Hippocampus, CA1
nTPM: 70.3
1873 Female, age 85, both hemispheres 78.4
2749 Male, age 80, left hemisphere 75.0
2527 Male, age 74, both hemispheres 70.4
2082 Female, age 91, right hemisphere 66.1
2045 Male, age 76, both hemispheres 61.5
Hippocampus, CA2
nTPM: 82.6
1940 Female, age 85, left hemisphere 95.0
2437 Female, age 94, left hemisphere 94.4
1963 Male, age 80, left hemisphere 84.0
1892 Male, age 76, both hemispheres 81.5
2113 Female, age 91, right hemisphere 72.5
2249 Male, age 74, both hemispheres 68.5
Hippocampus, CA3
nTPM: 71.1
1891 Female, age 85, both hemispheres 88.1
1867 Male, age 76, both hemispheres 82.1
2861 Female, age 67, both hemispheres 70.9
2620 Female, age 94, left hemisphere 70.3
2137 Male, age 80, left hemisphere 63.8
2436 Male, age 74, both hemispheres 51.3
Parahippocampal cortex
nTPM: 85.7
2532 Female, age 72, left hemisphere 119.6
2018 Male, age 76, both hemispheres 93.0
1850 Male, age 80, both hemispheres 92.7
2692 Male, age 74, both hemispheres 88.0
1933 Female, age 85, both hemispheres 86.6
1990 Female, age 91, right hemisphere 83.9
2245 Female, age 91, both hemispheres 78.2
2693 Female, age 94, both hemispheres 77.8
2622 Female, age 67, right hemisphere 71.3
2250 Female, age 67, right hemisphere 66.1
Perirhinal gyrus
nTPM: 88.3
1841 Female, age 85, right hemisphere 97.1
2521 Female, age 94, right hemisphere 90.0
1794 Male, age 80, right hemisphere 89.5
2848 Male, age 76, right hemisphere 87.4
1847 Female, age 91, left hemisphere 77.3
Subiculum
nTPM: 95.8
2042 Male, age 76, both hemispheres 124.6
2438 Female, age 94, left hemisphere 104.1
1901 Male, age 80, both hemispheres 97.3
1977 Female, age 85, both hemispheres 96.8
2619 Male, age 74, both hemispheres 81.0
2729 Female, age 91, right hemisphere 70.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 57.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.6
Samples: 197

Max nTPM: 145.8
Min nTPM: 26.5
Std nTPM: 17.4
Median nTPM: 53.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 145.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 124.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 111.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 109.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 103.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 97.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 96.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 94.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 92.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 90.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 85.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 79.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.3
FF:10153-102I9 76 years, female 85.0
FF:10169-103B7 60 years, female 73.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 81.1
Pig sample Sample description nTPM
Subiculum
nTPM: 50.2
Samples: 4

Max nTPM: 60.4
Min nTPM: 43.4
Sample A Female 60.4
Sample B Female 49.2
Sample C Male 43.4
Sample D Male 47.6
Dorsal hippocampus
nTPM: 81.1
Samples: 4

Max nTPM: 96.0
Min nTPM: 66.5
Sample A Female 96.0
Sample B Female 80.5
Sample C Male 81.3
Sample D Male 66.5
Entorhinal cortex
nTPM: 63.4
Samples: 4

Max nTPM: 69.2
Min nTPM: 58.6
Sample A Female 69.2
Sample B Female 65.1
Sample C Male 60.8
Sample D Male 58.6
Ventral hippocampus
nTPM: 61.3
Samples: 4

Max nTPM: 85.4
Min nTPM: 42.4
Sample A Female 54.5
Sample B Female 42.4
Sample C Male 62.9
Sample D Male 85.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 97.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.1
Samples: 4

Max nTPM: 83.1
Min nTPM: 72.2
Sample A Male 76.5
Sample B Male 83.1
Sample C Female 72.2
Sample D Female 80.6
Hippocampal formation
nTPM: 97.8
Samples: 4

Max nTPM: 113.6
Min nTPM: 87.7
Sample A Male 92.1
Sample B Male 97.8
Sample C Female 113.6
Sample D Female 87.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
2043 Antisense, RP_040407_02_E04, Mouse strain C57BL/6J (56 days, male) 12.4
2044 Antisense, RP_040407_02_E04, Mouse strain C57BL/6J (56 days, male) 5.7

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