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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RHOU is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
49.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
47.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
39.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
36.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
34.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
33.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
33.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
32.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
29.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
28.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
28.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
28.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
28.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
27.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
27.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
26.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
25.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
25.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
24.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
24.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
23.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
23.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
23.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
23.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
22.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
22.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
21.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
21.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
21.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
20.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
20.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
20.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
20.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
19.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
18.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
17.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
17.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
17.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
17.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
17.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
17.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
17.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
17.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
17.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
16.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
16.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
16.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
16.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
16.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
15.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
15.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
15.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
14.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
14.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
14.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
14.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
14.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
13.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
13.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
13.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
13.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
13.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
12.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
12.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
11.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
11.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
11.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
11.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
10.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
10.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
10.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
10.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
10.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
9.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
8.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
8.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
7.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
7.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
6.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
6.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
4.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
4.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
3.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RHOU is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.4
Number of samples
231
Samples
Sample
Description
TPM
DO48746
0 years, male, NA, stage:3, alive, 570 days
196.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
124.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
96.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
95.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
90.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
87.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
86.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
72.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
70.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
68.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
67.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
66.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
65.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
63.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
61.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
59.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
59.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
57.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
57.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
57.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
56.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
55.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
54.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
54.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
50.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
49.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
47.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
47.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
47.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
47.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
46.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
45.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
45.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
43.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
43.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
42.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
42.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
42.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
41.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
41.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
41.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
41.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
40.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
38.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
38.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
38.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
37.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
37.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
37.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
36.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
35.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
35.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
34.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
34.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
34.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
33.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
32.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
31.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
31.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
31.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
31.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
31.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
30.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
30.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
30.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
30.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
30.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
30.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
29.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
29.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
29.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
29.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
29.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
29.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
28.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
28.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
28.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
27.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
27.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
27.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
27.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
27.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
27.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
26.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
26.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
26.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
25.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
25.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
25.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
25.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
25.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
25.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
24.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
24.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
24.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
24.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
24.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
23.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
23.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
23.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
23.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
23.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
23.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
23.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
22.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
22.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
22.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
22.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
22.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
22.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
22.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
22.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
22.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
22.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
22.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
22.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
22.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
21.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
21.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
21.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
21.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
21.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
21.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
21.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
21.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
21.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
21.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
21.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
21.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
21.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
21.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
21.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
21.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
21.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
21.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
20.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
20.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
20.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
20.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
19.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
19.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
19.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
19.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
19.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
18.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
18.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
18.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
18.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
18.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
17.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
17.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
17.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
17.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
16.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
16.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
16.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
15.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
14.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
7.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
385
Tumor
1.5
1021
Tumor
1.4
393
Tumor
1.3
483
Tumor
1.3
424
Normal
1.3
414
Normal
1.1
428
Normal
1.1
881
Tumor
1.1
1025
Tumor
1.1
1031
Tumor
1.0
883
Tumor
1.0
777
Tumor
1.0
192
Normal
1.0
426
Normal
1.0
493
Tumor
1.0
951
Tumor
1.0
422
Normal
1.0
195
Tumor
0.9
911
Tumor
0.9
538
Normal
0.9
743
Tumor
0.8
1041
Tumor
0.8
515
Tumor
0.8
222
Normal
0.8
395
Tumor
0.8
191
Tumor
0.8
196
Normal
0.7
221
Tumor
0.7
425
Tumor
0.7
513
Tumor
0.7
423
Tumor
0.7
534
Normal
0.7
217
Tumor
0.7
546
Normal
0.6
517
Tumor
0.6
571
Tumor
0.6
413
Tumor
0.6
864
Normal
0.6
528
Normal
0.6
863
Tumor
0.6
516
Normal
0.5
574
Normal
0.5
218
Normal
0.5
866
Normal
0.5
563
Tumor
0.5
913
Tumor
0.5
491
Tumor
0.5
564
Normal
0.5
231
Tumor
0.5
554
Normal
0.5
396
Normal
0.5
524
Normal
0.4
487
Tumor
0.4
214
Normal
0.4
741
Tumor
0.4
545
Tumor
0.4
213
Tumor
0.4
227
Tumor
0.4
572
Normal
0.4
492
Normal
0.4
558
Normal
0.4
695
Tumor
0.4
713
Tumor
0.4
878
Normal
0.4
514
Normal
0.4
484
Normal
0.4
523
Tumor
0.4
862
Normal
0.3
715
Tumor
0.3
568
Normal
0.3
868
Normal
0.3
494
Normal
0.3
388
Normal
0.3
1028
Normal
0.3
421
Tumor
0.3
877
Tumor
0.3
526
Normal
0.3
553
Tumor
0.3
721
Tumor
0.3
714
Normal
0.3
742
Normal
0.3
722
Normal
0.2
867
Tumor
0.2
884
Normal
0.2
926
Normal
0.2
943
Tumor
0.2
212
Normal
0.2
728
Normal
0.2
1022
Normal
0.2
785
Tumor
0.2
518
Normal
0.2
224
Normal
0.2
937
Tumor
0.2
525
Tumor
0.2
223
Tumor
0.2
938
Normal
0.1
955
Tumor
0.1
918
Normal
0.1
557
Tumor
0.1
391
Tumor
0.1
745
Tumor
0.1
286
Normal
0.1
746
Normal
0.1
952
Normal
0.1
786
Normal
0.1
1042
Normal
0.1
874
Normal
0.1
696
Normal
0.1
686
Normal
0.1
1027
Tumor
0.1
912
Normal
0.1
723
Tumor
0.1
284
Normal
0.0
392
Normal
0.0
756
Normal
0.0
271
Tumor
0.0
1032
Normal
0.0
755
Tumor
0.0
813
Tumor
0.0
488
Normal
0.0
915
Tumor
0.0
778
Normal
0.0
427
Tumor
0.0
956
Normal
0.0
497
Tumor
0.0
922
Normal
0.0
924
Normal
0.0
228
Normal
-0.1
944
Normal
-0.1
716
Normal
-0.1
882
Normal
-0.1
744
Normal
-0.1
921
Tumor
-0.1
814
Normal
-0.1
387
Tumor
-0.1
873
Tumor
-0.1
268
Normal
-0.1
914
Normal
-0.1
498
Normal
-0.1
283
Tumor
-0.1
954
Normal
-0.1
1026
Normal
-0.1
232
Normal
-0.1
394
Normal
-0.2
916
Normal
-0.2
386
Normal
-0.2
258
Normal
-0.2
573
Tumor
-0.2
261
Tumor
-0.2
738
Normal
-0.2
724
Normal
-0.3
727
Tumor
-0.3
533
Tumor
-0.3
737
Tumor
-0.3
953
Tumor
-0.3
685
Tumor
-0.3
917
Tumor
-0.4
262
Normal
-0.4
272
Normal
-0.4
923
Tumor
-0.4
285
Tumor
-0.4
527
Tumor
-0.4
865
Tumor
-0.4
211
Tumor
-0.4
537
Tumor
-0.4
861
Tumor
-0.5
567
Tumor
-0.7
257
Tumor
-0.7
267
Tumor
-0.7
925
Tumor
-0.7
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
141
Tumor
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
957
Tumor
N/A
958
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
963
Tumor
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
627
Tumor
N/A
628
Normal
N/A
635
Tumor
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
451
Tumor
N/A
331
Tumor
N/A
452
Normal
N/A
332
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
342
Normal
N/A
463
Tumor
N/A
343
Tumor
N/A
464
Normal
N/A
344
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
