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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFPQ is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
81.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
59.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
57.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
56.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
54.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
51.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
48.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
46.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
46.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
45.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
44.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
42.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
42.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
42.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
40.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
39.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
38.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
35.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
34.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
32.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
31.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
30.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
29.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
28.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
23.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
23.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
20.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
17.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
17.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
10.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFPQ is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
115.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
106.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
102.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
93.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
86.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
86.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
85.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
84.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
82.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
82.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
81.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
77.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
75.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
74.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
73.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
73.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
73.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
72.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
71.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
70.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
70.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
70.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
70.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
70.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
69.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
69.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
67.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
67.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
66.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
66.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
66.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
66.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
66.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
65.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
65.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
64.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
63.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
63.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
62.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
62.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
61.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
61.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
61.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
60.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
60.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
60.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
59.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
59.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
59.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
59.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
58.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
58.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
58.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
58.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
58.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
58.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
57.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
57.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
57.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
57.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
57.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
57.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
57.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
56.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
56.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
56.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
56.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
56.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
56.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
56.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
55.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
55.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
54.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
54.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
54.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
53.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
53.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
53.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
53.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
52.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
52.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
52.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
52.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
52.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
51.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
51.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
51.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
51.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
51.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
50.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
50.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
50.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
50.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
50.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
50.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
49.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
49.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
49.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
49.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
49.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
49.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
49.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
49.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
48.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
48.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
48.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
48.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
48.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
48.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
48.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
47.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
47.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
47.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
47.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
46.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
46.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
46.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
46.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
46.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
46.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
46.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
45.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
45.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
45.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
45.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
45.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
45.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
45.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
45.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
45.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
44.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
44.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
44.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
44.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
44.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
44.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
44.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
44.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
43.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
43.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
43.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
43.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
42.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
42.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
42.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
42.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
42.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
42.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
41.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
41.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
41.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
41.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
41.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
41.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
41.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
41.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
41.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
41.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
41.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
41.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
40.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
40.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
40.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
40.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
40.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
40.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
40.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
40.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
40.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
40.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
40.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
40.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
40.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
39.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
39.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
39.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
39.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
39.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
39.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
39.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
39.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
39.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
39.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
39.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
39.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
39.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
39.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
38.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
38.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
38.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
38.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
38.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
38.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
38.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
37.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
37.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
37.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
37.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
37.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
37.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
37.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
36.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
36.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
36.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
36.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
36.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
36.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
36.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
36.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
35.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
35.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
35.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
35.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
35.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
35.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
35.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
35.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
35.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
35.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
35.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
35.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
35.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
34.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
34.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
34.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
34.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
34.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
34.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
34.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
34.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
33.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
33.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
33.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
33.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
33.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
33.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
33.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
33.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
33.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
33.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
32.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
32.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
32.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
32.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
32.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
31.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
31.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
31.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
31.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
31.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
31.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
30.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
30.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
30.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
30.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
30.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
30.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
30.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
29.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
29.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
29.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
29.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
28.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
28.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
28.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
27.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
27.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
27.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
27.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
27.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
26.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
26.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
26.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
26.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
26.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
25.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
23.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
23.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
23.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
23.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
21.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
21.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
20.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
19.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
19.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
16.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFPQ is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
110.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
103.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
95.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
92.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
90.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
88.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
78.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
77.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
75.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
74.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
73.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
72.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
70.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
70.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
69.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
69.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
69.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
67.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
67.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
66.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
65.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
65.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
64.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
62.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
62.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
61.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
60.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
60.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
60.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
60.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
59.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
59.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
58.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
56.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
55.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
55.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
54.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
54.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
52.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
52.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
51.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
51.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
50.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
49.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
48.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
48.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
48.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
48.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
47.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
47.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
46.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
45.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
45.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
44.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
44.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
43.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
40.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
40.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
40.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
38.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
37.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
32.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
30.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
27.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFPQ is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
131.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
104.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
98.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
91.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
91.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
86.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
85.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
83.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
80.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
80.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
77.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
74.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
74.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
72.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
72.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
69.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
69.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
69.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
66.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
63.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
62.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
62.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
61.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
61.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
60.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
59.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
59.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
58.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
58.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
57.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
56.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
56.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
56.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
55.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
54.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
54.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
53.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
53.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
53.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
53.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
53.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
52.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
52.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
52.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
51.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
51.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
51.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
51.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
51.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
50.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
50.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
50.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
50.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
50.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
49.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
49.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
49.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
49.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
49.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
48.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
48.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
48.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
47.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
47.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
47.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
47.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
47.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
46.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
46.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
46.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
46.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
45.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
45.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
45.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
45.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
45.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
45.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
45.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
45.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
45.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
44.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
44.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
44.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
43.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
43.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
42.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
42.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
42.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
42.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
42.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
41.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
41.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
41.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
41.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
41.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
41.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
40.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
40.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
40.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
40.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
40.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
39.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
39.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
39.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
38.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
38.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
38.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
38.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
38.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
38.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
38.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
37.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
37.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
36.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
36.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
36.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
35.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
35.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
35.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
35.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
35.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
35.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
35.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
34.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
34.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
34.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
33.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
33.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
33.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
33.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
33.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
32.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
32.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
32.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
32.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
31.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
31.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
31.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
30.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
30.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
30.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
29.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
29.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
29.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
28.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
28.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
28.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
26.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
25.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
25.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
25.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
25.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
24.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
24.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
24.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
22.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
22.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
21.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
21.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
21.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
20.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
16.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
15.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092190003
Normal
0.4
CPT0088970003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0001270001
Normal
0.3
CPT0009060003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0077490003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0001260009
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0014370004
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0078530001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0088480003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0000790001
Normal
0.0
CPT0079270003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0021240003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0076330003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0002270011
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
