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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.1
nTPM
HPA Brain:
219.3
nTPM
GTEx:
37.1
nTPM
FANTOM5:
39.4
Scaled Tags Per Million
Pig:
71.9
nTPM
Mouse:
126.0
nTPM
Allen mouse:
0.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
219.3
Sample id
Sample description
nTPM
Amygdala nTPM: 161.4
2814
Male, age 76, right hemisphere
369.8
2517
Female, age 94, left hemisphere
143.4
2695
Female, age 67, right hemisphere
122.0
2514
Male, age 75, right hemisphere
94.4
1987
Female, age 91, left hemisphere
77.3
Basal amygdala nTPM: 219.3
2685
Female, age 94, left hemisphere
254.7
1955
Male, age 76, both hemispheres
253.0
2827
Female, age 67, right hemisphere
246.8
2243
Female, age 91, right hemisphere
219.3
2609
Male, age 75, right hemisphere
181.8
2110
Male, age 80, left hemisphere
160.3
Central amygdala nTPM: 158.3
1905
Male, age 76, both hemispheres
317.1
2826
Female, age 94, left hemisphere
160.7
2239
Male, age 80, left hemisphere
138.2
2515
Male, age 75, right hemisphere
90.4
2701
Female, age 91, right hemisphere
84.9
Corticomedial amygdala nTPM: 190.0
2535
Female, age 67, right hemisphere
265.2
2829
Male, age 80, left hemisphere
199.7
2240
Male, age 76, both hemispheres
192.3
2242
Female, age 91, right hemisphere
185.7
2428
Male, age 75, right hemisphere
151.8
2429
Female, age 94, left hemisphere
145.5
Lateral amygdala nTPM: 144.6
1883
Male, age 76, both hemispheres
252.1
2534
Female, age 94, left hemisphere
158.9
2256
Male, age 80, left hemisphere
142.9
2255
Female, age 91, right hemisphere
130.7
2830
Female, age 67, right hemisphere
108.0
2516
Male, age 75, right hemisphere
74.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
37.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 37.1
Samples: 152
Max nTPM: 81.3
Min nTPM: 1.4
Std nTPM: 18.6
Median nTPM: 34.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
81.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
79.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
79.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
78.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
76.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
74.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
74.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
73.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
73.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
72.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
71.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
69.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
69.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
67.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
65.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
65.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
64.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
63.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
61.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
60.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
60.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
59.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
57.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
57.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
55.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
54.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
53.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
53.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
53.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
53.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
52.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
52.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
51.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
51.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
50.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
50.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
50.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
49.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
47.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
47.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
46.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
46.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
46.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
45.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
45.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
45.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
45.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
45.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
44.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
44.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
44.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
43.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
41.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
41.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
40.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
40.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
40.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
40.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
39.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
39.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
39.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
39.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
38.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
38.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
38.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
37.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
37.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
37.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
36.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
36.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
35.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
35.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
35.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
33.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
33.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
33.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
33.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
33.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
33.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
32.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
31.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
30.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
30.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
30.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
29.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
28.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
28.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
28.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
28.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
27.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
27.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
27.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
27.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
26.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
26.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
26.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
26.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
26.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
26.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
25.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
25.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
24.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
24.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
24.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
24.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
23.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
23.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
22.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
22.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
22.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
21.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
21.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
21.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
21.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
21.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
20.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
19.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
19.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
19.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
19.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
16.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
16.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
16.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
15.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
15.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
14.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
14.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
14.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
14.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
14.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
13.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
13.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
12.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
11.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
11.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
8.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
7.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
7.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
5.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
126.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 126.0
Samples: 4
Max nTPM: 173.8
Min nTPM: 100.6
Sample A
Male
100.6
Sample B
Male
118.5
Sample C
Female
173.8
Sample D
Female
111.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.