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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
112.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
74.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
66.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
62.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
58.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
58.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
58.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
56.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
55.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
48.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
45.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
44.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
43.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
43.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
42.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
41.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
39.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
37.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
36.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
36.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
36.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
34.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
34.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
34.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
33.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
33.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
33.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
32.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
32.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
32.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
32.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
32.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
31.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
30.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
30.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
30.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
30.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
30.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
29.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
29.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
29.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
29.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
29.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
29.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
29.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
27.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
27.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
26.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
26.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
26.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
26.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
26.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
26.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
25.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
24.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
24.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
24.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
23.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
23.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
23.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
23.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
22.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
22.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
22.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
22.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
21.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
21.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
21.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
21.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
21.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
21.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
20.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
20.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
20.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
20.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
20.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
18.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
18.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
18.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
18.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
17.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
17.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
17.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
16.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
16.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
16.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
15.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
15.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
15.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
15.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
15.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
15.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
15.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
15.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
15.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
15.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
15.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
15.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
14.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
14.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
14.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
13.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
13.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
13.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
13.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
13.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
12.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
11.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
11.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
10.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
10.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
10.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
7.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
6.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
4.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
3.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.9
Number of samples
231
Samples
Sample
Description
TPM
DO45249
0 years, male, NA, stage:1, alive, 630 days
227.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
221.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
180.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
156.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
154.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
147.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
145.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
124.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
111.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
107.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
107.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
106.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
106.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
104.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
103.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
103.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
101.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
101.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
101.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
99.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
99.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
99.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
98.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
93.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
92.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
92.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
91.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
90.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
89.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
88.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
83.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
82.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
82.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
80.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
79.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
78.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
77.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
77.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
76.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
76.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
75.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
75.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
75.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
73.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
73.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
72.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
72.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
72.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
71.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
71.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
71.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
70.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
70.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
69.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
69.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
69.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
69.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
68.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
67.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
67.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
67.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
67.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
66.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
66.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
65.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
65.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
64.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
63.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
63.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
62.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
62.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
61.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
61.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
60.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
60.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
60.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
59.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
59.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
59.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
59.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
58.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
58.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
58.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
58.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
58.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
58.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
58.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
57.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
57.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
56.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
56.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
56.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
56.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
55.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
55.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
55.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
55.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
54.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
54.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
54.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
54.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
53.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
53.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
52.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
52.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
52.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
52.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
51.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
51.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
51.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
51.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
51.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
50.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
50.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
49.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
49.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
49.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
48.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
47.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
47.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
47.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
47.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
47.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
47.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
47.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
46.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
46.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
46.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
46.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
46.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
46.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
46.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
46.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
46.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
46.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
46.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
45.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
44.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
43.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
43.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
43.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
43.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
43.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
43.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
43.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
43.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
42.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
42.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
42.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
41.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
41.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
41.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
41.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
41.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
41.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
41.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
40.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
40.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
40.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
39.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
39.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
39.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
39.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
39.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
38.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
38.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
37.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
37.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
36.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
36.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
36.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
35.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
35.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
35.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
35.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
34.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
34.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
34.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
34.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
34.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
34.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
33.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
32.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
32.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
32.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
32.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
32.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
32.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
31.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
30.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
30.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
30.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
29.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
29.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
29.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
28.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
28.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
27.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
26.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
26.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
26.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
25.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
25.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
24.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
23.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
22.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
22.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
21.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
21.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
21.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
20.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
19.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
18.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
18.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
18.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
17.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
14.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
14.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
1.6
525
Tumor
1.5
491
Tumor
1.4
823
Tumor
1.4
123
Tumor
1.4
745
Tumor
1.4
957
Tumor
1.4
1027
Tumor
1.3
473
Tumor
1.2
1021
Tumor
1.2
697
Tumor
1.2
487
Tumor
1.1
1025
Tumor
1.1
231
Tumor
1.1
567
Tumor
1.0
573
Tumor
1.0
471
Tumor
1.0
537
Tumor
1.0
523
Tumor
1.0
343
Tumor
0.9
497
Tumor
0.9
211
Tumor
0.9
553
Tumor
0.9
271
Tumor
0.9
724
Normal
0.9
427
Tumor
0.8
375
Tumor
0.8
743
Tumor
0.8
965
Tumor
0.8
1013
Tumor
0.8
685
Tumor
0.8
257
Tumor
0.8
227
Tumor
0.8
977
Tumor
0.7
443
Tumor
0.7
425
Tumor
0.7
147
Tumor
0.7
527
Tumor
0.7
387
Tumor
0.7
865
Tumor
0.7
125
Tumor
0.7
1041
Tumor
0.7
953
Tumor
0.7
951
Tumor
0.6
131
Tumor
0.6
355
Tumor
0.6
161
Tumor
0.6
1031
Tumor
0.6
283
Tumor
0.6
517
Tumor
0.6
545
Tumor
0.6
221
Tumor
0.6
635
Tumor
0.6
925
Tumor
0.6
881
Tumor
0.5
483
Tumor
0.5
213
Tumor
0.5
411
Tumor
0.5
191
Tumor
0.5
923
Tumor
0.5
431
Tumor
0.5
447
Tumor
0.5
493
Tumor
0.5
817
Tumor
0.5
777
Tumor
0.5
455
Tumor
0.5
813
Tumor
0.4
715
Tumor
0.4
557
Tumor
0.4
861
Tumor
0.4
327
Tumor
0.4
351
Tumor
0.4
313
Tumor
0.4
983
Tumor
0.4
171
Tumor
0.4
641
Tumor
0.4
921
Tumor
0.4
963
Tumor
0.4
285
Tumor
0.4
395
Tumor
0.3
911
Tumor
0.3
877
Tumor
0.3
383
Tumor
0.3
571
Tumor
0.3
913
Tumor
0.3
277
Tumor
0.3
451
Tumor
0.3
135
Tumor
0.3
741
Tumor
0.3
665
Tumor
0.3
975
Tumor
0.3
463
Tumor
0.2
721
Tumor
0.2
367
Tumor
0.2
851
Tumor
0.2
477
Tumor
0.2
647
Tumor
0.2
415
Tumor
0.2
863
Tumor
0.2
671
Tumor
0.2
663
Tumor
0.2
883
Tumor
0.2
515
Tumor
0.2
267
Tumor
0.2
297
Tumor
0.1
461
Tumor
0.1
435
Tumor
0.1
937
Tumor
0.1
331
Tumor
0.1
361
Tumor
0.0
385
Tumor
0.0
661
Tumor
0.0
421
Tumor
0.0
814
Normal
0.0
1043
Tumor
0.0
713
Tumor
0.0
915
Tumor
0.0
695
Tumor
0.0
393
Tumor
0.0
145
Tumor
0.0
563
Tumor
0.0
217
Tumor
0.0
867
Tumor
0.0
737
Tumor
0.0
185
Tumor
-0.1
223
Tumor
-0.1
187
Tumor
-0.1
127
Tumor
-0.1
526
Normal
-0.1
1015
Tumor
-0.1
755
Tumor
-0.1
363
Tumor
-0.1
311
Tumor
-0.1
873
Tumor
-0.1
513
Tumor
-0.1
917
Tumor
-0.1
943
Tumor
-0.1
433
Tumor
-0.1
445
Tumor
-0.2
981
Tumor
-0.2
785
Tumor
-0.2
1042
Normal
-0.2
195
Tumor
-0.2
357
Tumor
-0.2
481
Tumor
-0.2
1014
Normal
-0.2
141
Tumor
-0.2
524
Normal
-0.2
617
Tumor
-0.2
535
Tumor
-0.3
341
Tumor
-0.3
113
Tumor
-0.3
727
Tumor
-0.3
967
Tumor
-0.3
112
Tumor
-0.3
815
Tumor
-0.3
1045
Tumor
-0.3
627
Tumor
-0.3
954
Normal
-0.3
478
Normal
-0.3
423
Tumor
-0.3
857
Tumor
-0.3
818
Normal
-0.4
978
Normal
-0.4
958
Normal
-0.4
492
Normal
-0.4
964
Normal
-0.4
536
Normal
-0.4
554
Normal
-0.4
498
Normal
-0.4
824
Normal
-0.4
124
Normal
-0.4
137
Tumor
-0.4
365
Tumor
-0.4
488
Normal
-0.4
528
Normal
-0.4
944
Normal
-0.4
1026
Normal
-0.4
1032
Normal
-0.4
494
Normal
-0.4
428
Normal
-0.4
568
Normal
-0.4
534
Normal
-0.4
966
Normal
-0.4
434
Normal
-0.4
976
Normal
-0.4
261
Tumor
-0.4
391
Tumor
-0.4
258
Normal
-0.4
232
Normal
-0.4
984
Normal
-0.5
518
Normal
-0.5
353
Tumor
-0.5
916
Normal
-0.5
574
Normal
-0.5
268
Normal
-0.5
384
Normal
-0.5
615
Tumor
-0.5
484
Normal
-0.5
926
Normal
-0.5
111
Normal
-0.5
472
Normal
-0.5
467
Tumor
-0.5
516
Normal
-0.5
982
Normal
-0.5
728
Normal
-0.5
952
Normal
-0.5
364
Normal
-0.5
778
Normal
-0.5
858
Normal
-0.5
262
Normal
-0.5
514
Normal
-0.5
1044
Normal
-0.5
465
Tumor
-0.5
368
Normal
-0.5
218
Normal
-0.5
413
Tumor
-0.5
1016
Normal
-0.5
955
Tumor
-0.5
224
Normal
-0.5
1028
Normal
-0.5
868
Normal
-0.5
968
Normal
-0.5
426
Normal
-0.5
756
Normal
-0.5
538
Normal
-0.5
376
Normal
-0.5
142
Normal
-0.6
272
Normal
-0.6
816
Normal
-0.6
424
Normal
-0.6
192
Normal
-0.6
132
Normal
-0.6
922
Normal
-0.6
636
Normal
-0.6
148
Normal
-0.6
482
Normal
-0.6
912
Normal
-0.6
432
Normal
-0.6
474
Normal
-0.6
422
Normal
-0.6
918
Normal
-0.6
286
Normal
-0.6
344
Normal
-0.6
462
Normal
-0.6
362
Normal
-0.6
628
Normal
-0.6
558
Normal
-0.6
114
Normal
-0.6
564
Normal
-0.6
284
Normal
-0.6
956
Normal
-0.6
212
Normal
-0.6
938
Normal
-0.6
444
Normal
-0.6
884
Normal
-0.6
126
Normal
-0.6
436
Normal
-0.6
642
Normal
-0.6
722
Normal
-0.6
414
Normal
-0.7
328
Normal
-0.7
162
Normal
-0.7
686
Normal
-0.7
138
Normal
-0.7
1046
Normal
-0.7
852
Normal
-0.7
416
Normal
-0.7
1022
Normal
-0.7
222
Normal
-0.7
572
Normal
-0.7
446
Normal
-0.7
786
Normal
-0.7
172
Normal
-0.7
186
Normal
-0.7
228
Normal
-0.7
386
Normal
-0.7
456
Normal
-0.7
448
Normal
-0.7
914
Normal
-0.7
874
Normal
-0.7
136
Normal
-0.7
352
Normal
-0.7
864
Normal
-0.7
546
Normal
-0.7
188
Normal
-0.7
662
Normal
-0.7
698
Normal
-0.7
356
Normal
-0.7
616
Normal
-0.7
744
Normal
-0.7
214
Normal
-0.7
746
Normal
-0.7
738
Normal
-0.7
412
Normal
-0.7
742
Normal
-0.7
354
Normal
-0.7
696
Normal
-0.7
866
Normal
-0.7
618
Normal
-0.7
714
Normal
-0.7
672
Normal
-0.7
924
Normal
-0.7
366
Normal
-0.7
128
Normal
-0.7
723
Tumor
-0.7
396
Normal
-0.7
666
Normal
-0.8
358
Normal
-0.8
394
Normal
-0.8
388
Normal
-0.8
196
Normal
-0.8
146
Normal
-0.8
342
Normal
-0.8
392
Normal
-0.8
716
Normal
-0.8
298
Normal
-0.8
464
Normal
-0.8
452
Normal
-0.8
664
Normal
-0.9
648
Normal
-0.9
468
Normal
-0.9
882
Normal
-0.9
314
Normal
-0.9
278
Normal
-0.9
466
Normal
-0.9
312
Normal
-0.9
862
Normal
-0.9
878
Normal
-1.0
332
Normal
-1.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.