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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRSF4 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
83.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
69.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
68.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
65.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
64.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
63.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
58.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
55.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
54.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
52.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
52.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
51.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
50.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
50.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
49.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
48.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
47.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
47.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
45.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
45.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
45.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
45.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
44.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
44.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
43.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
43.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
43.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
43.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
42.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
42.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
42.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
41.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
41.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
40.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
40.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
40.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
39.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
39.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
39.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
39.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
38.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
38.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
38.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
37.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
37.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
37.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
37.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
36.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
35.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
35.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
35.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
35.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
35.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
35.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
35.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
35.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
35.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
34.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
34.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
34.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
34.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
34.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
34.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
33.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
33.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
32.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
32.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
32.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
32.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
32.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
32.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
31.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
31.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
31.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
31.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
31.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
31.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
31.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
31.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
30.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
30.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
30.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
30.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
30.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
30.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
30.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
30.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
30.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
30.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
30.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
29.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
29.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
29.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
29.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
29.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
29.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
29.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
29.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
29.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
29.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
29.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
29.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
29.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
29.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
28.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
28.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
28.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
28.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
28.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
28.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
28.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
28.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
28.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
28.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
27.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
27.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
27.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
27.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
27.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
27.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
27.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
27.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
27.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
27.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
26.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
26.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
26.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
26.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
26.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
26.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
26.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
26.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
26.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
26.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
26.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
26.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
26.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
26.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
26.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
26.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
26.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
26.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
26.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
25.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
25.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
25.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
25.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
25.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
25.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
25.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
25.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
25.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
25.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
25.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
25.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
25.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
25.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
25.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
24.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
24.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
24.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
24.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
24.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
24.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
24.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
24.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
24.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
24.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
24.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
24.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
24.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
24.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
24.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
24.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
23.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
23.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
23.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
23.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
23.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
23.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
23.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
23.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
23.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
23.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
23.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
23.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
23.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
23.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
23.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
23.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
23.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
22.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
22.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
22.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
22.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
22.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
22.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
22.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
22.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
22.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
22.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
22.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
22.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
22.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
22.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
22.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
21.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
21.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
21.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
21.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
21.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
21.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
21.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
21.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
21.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
21.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
21.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
21.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
21.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
21.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
21.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
20.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
20.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
20.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
20.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
20.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
20.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
19.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
19.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
19.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
19.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
19.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
19.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
19.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
19.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
19.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
19.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
19.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
19.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
18.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
18.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
18.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
18.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
18.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
18.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
17.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
17.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
17.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
17.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
17.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
17.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
17.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
17.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
17.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
17.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
16.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
16.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
16.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
16.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
16.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
16.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
16.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
16.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
16.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
16.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
16.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
16.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
15.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
15.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
14.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
14.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
14.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
14.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
14.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
13.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
13.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
13.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
13.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
11.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
10.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
10.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
8.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SRSF4 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.4
Number of samples
231
Samples
Sample
Description
TPM
DO50800
0 years, male, NA, stage:2, alive, 510 days
91.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
90.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
90.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
82.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
77.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
73.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
72.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
72.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
70.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
70.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
68.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
67.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
67.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
67.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
65.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
63.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
62.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
62.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
61.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
61.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
61.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
60.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
57.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
56.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
56.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
56.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
56.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
55.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
54.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
53.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
53.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
52.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
51.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
51.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
51.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
51.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
50.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
49.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
49.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
49.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
48.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
48.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
47.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
47.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
47.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
47.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
46.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
46.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
46.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
46.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
46.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
46.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
45.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
45.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
45.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
45.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
45.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
44.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
44.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
44.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
44.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
44.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
43.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
43.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
43.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
43.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
42.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
42.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
42.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
41.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
41.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
41.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
41.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
41.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
41.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
41.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
41.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
40.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
40.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
40.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
40.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
40.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
40.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
40.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
39.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
39.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
39.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
39.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
38.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
38.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
38.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
38.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
38.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
38.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
38.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
37.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
37.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
37.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
37.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
37.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
36.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
36.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
36.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
36.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
36.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
36.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
36.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
35.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
35.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
35.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
35.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
35.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
35.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
34.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
34.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
34.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
33.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
33.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
33.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
33.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
33.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
33.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
33.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
33.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
33.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
33.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
32.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
32.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
32.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
32.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
32.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
32.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
32.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
32.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
32.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
32.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
32.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
31.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
31.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
31.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
31.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
31.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
31.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
31.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
31.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
31.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
31.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
30.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
30.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
30.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
30.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
30.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
30.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
30.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
30.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
29.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
29.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
29.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
29.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
29.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
29.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
28.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
28.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
28.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
28.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
28.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
28.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
28.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
27.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
27.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
27.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
27.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
27.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
26.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
26.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
26.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
26.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
26.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
25.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
25.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
25.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
25.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
25.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
24.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
24.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
24.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
24.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
24.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
24.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
23.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
23.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
23.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
22.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
21.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
21.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
21.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
20.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
20.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
20.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
20.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
20.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
20.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
19.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
19.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
19.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
18.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
18.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
18.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
16.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
16.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
355
Tumor
1.0
487
Tumor
0.9
965
Tumor
0.9
425
Tumor
0.9
977
Tumor
0.8
497
Tumor
0.8
695
Tumor
0.8
545
Tumor
0.7
431
Tumor
0.7
131
Tumor
0.7
661
Tumor
0.7
527
Tumor
0.7
865
Tumor
0.7
211
Tumor
0.7
1021
Tumor
0.7
1013
Tumor
0.7
741
Tumor
0.6
861
Tumor
0.6
727
Tumor
0.6
957
Tumor
0.6
685
Tumor
0.6
473
Tumor
0.6
515
Tumor
0.6
523
Tumor
0.6
724
Normal
0.5
953
Tumor
0.5
923
Tumor
0.5
951
Tumor
0.5
943
Tumor
0.5
1041
Tumor
0.5
981
Tumor
0.5
881
Tumor
0.5
483
Tumor
0.5
1031
Tumor
0.5
277
Tumor
0.5
967
Tumor
0.5
413
Tumor
0.5
492
Normal
0.5
785
Tumor
0.5
161
Tumor
0.5
883
Tumor
0.5
461
Tumor
0.5
777
Tumor
0.5
443
Tumor
0.5
112
Tumor
0.4
867
Tumor
0.4
553
Tumor
0.4
123
Tumor
0.4
663
Tumor
0.4
554
Normal
0.4
915
Tumor
0.4
171
Tumor
0.4
737
Tumor
0.4
538
Normal
0.4
493
Tumor
0.4
963
Tumor
0.4
477
Tumor
0.4
351
Tumor
0.4
537
Tumor
0.4
395
Tumor
0.4
743
Tumor
0.4
478
Normal
0.4
451
Tumor
0.4
715
Tumor
0.4
513
Tumor
0.3
721
Tumor
0.3
1015
Tumor
0.3
524
Normal
0.3
665
Tumor
0.3
125
Tumor
0.3
557
Tumor
0.3
331
Tumor
0.3
517
Tumor
0.3
285
Tumor
0.3
573
Tumor
0.3
937
Tumor
0.3
533
Tumor
0.3
975
Tumor
0.3
755
Tumor
0.3
313
Tumor
0.3
535
Tumor
0.3
341
Tumor
0.3
921
Tumor
0.3
647
Tumor
0.3
817
Tumor
0.3
525
Tumor
0.3
471
Tumor
0.3
815
Tumor
0.3
536
Normal
0.3
433
Tumor
0.3
357
Tumor
0.3
455
Tumor
0.2
983
Tumor
0.2
484
Normal
0.2
498
Normal
0.2
141
Tumor
0.2
297
Tumor
0.2
966
Normal
0.2
917
Tumor
0.2
481
Tumor
0.2
878
Normal
0.2
231
Tumor
0.2
261
Tumor
0.2
472
Normal
0.2
367
Tumor
0.2
857
Tumor
0.2
411
Tumor
0.2
571
Tumor
0.2
187
Tumor
0.2
911
Tumor
0.2
863
Tumor
0.2
955
Tumor
0.2
823
Tumor
0.2
516
Normal
0.2
467
Tumor
0.2
1028
Normal
0.2
851
Tumor
0.2
465
Tumor
0.2
415
Tumor
0.2
221
Tumor
0.2
1027
Tumor
0.2
494
Normal
0.2
814
Normal
0.2
491
Tumor
0.2
353
Tumor
0.2
212
Normal
0.2
447
Tumor
0.2
327
Tumor
0.2
427
Tumor
0.2
488
Normal
0.2
916
Normal
0.2
546
Normal
0.2
383
Tumor
0.2
412
Normal
0.2
913
Tumor
0.2
113
Tumor
0.2
534
Normal
0.1
518
Normal
0.1
375
Tumor
0.1
385
Tumor
0.1
1025
Tumor
0.1
271
Tumor
0.1
635
Tumor
0.1
528
Normal
0.1
463
Tumor
0.1
423
Tumor
0.1
984
Normal
0.1
474
Normal
0.1
922
Normal
0.1
135
Tumor
0.1
958
Normal
0.1
223
Tumor
0.1
697
Tumor
0.1
268
Normal
0.1
744
Normal
0.1
213
Tumor
0.1
445
Tumor
0.1
434
Normal
0.1
627
Tumor
0.1
1045
Tumor
0.1
728
Normal
0.1
185
Tumor
0.1
778
Normal
0.1
1032
Normal
0.1
824
Normal
0.1
873
Tumor
0.1
145
Tumor
0.1
617
Tumor
0.1
874
Normal
0.1
924
Normal
0.1
641
Tumor
0.1
363
Tumor
0.1
852
Normal
0.1
311
Tumor
0.1
952
Normal
0.1
686
Normal
0.1
567
Tumor
0.1
738
Normal
0.0
563
Tumor
0.0
142
Normal
0.0
877
Tumor
0.0
954
Normal
0.0
462
Normal
0.0
918
Normal
0.0
1014
Normal
0.0
756
Normal
0.0
746
Normal
0.0
813
Tumor
0.0
343
Tumor
0.0
558
Normal
0.0
1026
Normal
0.0
365
Tumor
0.0
421
Tumor
0.0
696
Normal
0.0
938
Normal
0.0
671
Tumor
0.0
714
Normal
0.0
944
Normal
0.0
526
Normal
0.0
448
Normal
0.0
866
Normal
0.0
882
Normal
0.0
978
Normal
0.0
786
Normal
0.0
283
Tumor
0.0
386
Normal
0.0
968
Normal
0.0
1022
Normal
0.0
982
Normal
0.0
416
Normal
0.0
137
Tumor
0.0
858
Normal
0.0
662
Normal
0.0
114
Normal
0.0
267
Tumor
0.0
218
Normal
0.0
816
Normal
0.0
393
Tumor
0.0
192
Normal
0.0
195
Tumor
0.0
217
Tumor
0.0
452
Normal
0.0
672
Normal
0.0
818
Normal
0.0
356
Normal
-0.1
328
Normal
-0.1
344
Normal
-0.1
124
Normal
-0.1
956
Normal
-0.1
664
Normal
-0.1
925
Tumor
-0.1
628
Normal
-0.1
716
Normal
-0.1
468
Normal
-0.1
482
Normal
-0.1
1042
Normal
-0.1
391
Tumor
-0.1
1016
Normal
-0.1
572
Normal
-0.1
396
Normal
-0.1
742
Normal
-0.1
514
Normal
-0.1
426
Normal
-0.1
564
Normal
-0.1
574
Normal
-0.1
1043
Tumor
-0.1
342
Normal
-0.1
138
Normal
-0.1
228
Normal
-0.1
976
Normal
-0.1
188
Normal
-0.1
312
Normal
-0.1
648
Normal
-0.1
642
Normal
-0.1
864
Normal
-0.1
1044
Normal
-0.1
146
Normal
-0.1
364
Normal
-0.1
435
Tumor
-0.1
666
Normal
-0.1
368
Normal
-0.1
257
Tumor
-0.1
964
Normal
-0.1
362
Normal
-0.1
126
Normal
-0.1
227
Tumor
-0.2
636
Normal
-0.2
615
Tumor
-0.2
868
Normal
-0.2
298
Normal
-0.2
698
Normal
-0.2
128
Normal
-0.2
456
Normal
-0.2
127
Tumor
-0.2
136
Normal
-0.2
224
Normal
-0.2
713
Tumor
-0.2
286
Normal
-0.2
464
Normal
-0.2
222
Normal
-0.2
862
Normal
-0.2
912
Normal
-0.2
147
Tumor
-0.2
422
Normal
-0.2
618
Normal
-0.2
568
Normal
-0.2
424
Normal
-0.2
466
Normal
-0.2
262
Normal
-0.2
361
Tumor
-0.2
366
Normal
-0.2
111
Normal
-0.2
284
Normal
-0.2
414
Normal
-0.2
272
Normal
-0.2
132
Normal
-0.3
387
Tumor
-0.3
926
Normal
-0.3
258
Normal
-0.3
191
Tumor
-0.3
384
Normal
-0.3
214
Normal
-0.3
723
Tumor
-0.3
352
Normal
-0.3
1046
Normal
-0.3
436
Normal
-0.3
392
Normal
-0.3
616
Normal
-0.3
278
Normal
-0.3
884
Normal
-0.3
432
Normal
-0.3
196
Normal
-0.3
172
Normal
-0.3
444
Normal
-0.3
332
Normal
-0.4
232
Normal
-0.4
722
Normal
-0.4
162
Normal
-0.4
148
Normal
-0.4
446
Normal
-0.4
376
Normal
-0.4
394
Normal
-0.4
186
Normal
-0.4
388
Normal
-0.4
358
Normal
-0.4
428
Normal
-0.4
354
Normal
-0.5
914
Normal
-0.5
745
Tumor
-0.5
314
Normal
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.