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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL22 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
304.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1325.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
977.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
875.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
867.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
817.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
803.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
782.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
735.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
728.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
712.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
711.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
691.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
689.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
660.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
653.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
630.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
624.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
604.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
596.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
595.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
586.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
579.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
556.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
552.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
546.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
536.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
532.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
525.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
525.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
524.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
523.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
520.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
516.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
512.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
506.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
503.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
501.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
496.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
494.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
489.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
486.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
480.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
475.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
474.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
473.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
471.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
463.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
461.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
459.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
454.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
448.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
442.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
437.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
436.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
434.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
433.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
428.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
424.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
419.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
416.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
413.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
411.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
411.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
410.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
406.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
403.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
400.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
399.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
395.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
393.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
392.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
390.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
390.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
389.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
388.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
388.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
387.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
386.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
384.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
383.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
383.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
381.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
381.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
381.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
380.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
380.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
377.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
373.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
371.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
371.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
366.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
360.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
360.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
359.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
359.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
358.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
357.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
355.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
354.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
351.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
350.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
349.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
348.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
344.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
341.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
341.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
339.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
338.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
337.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
334.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
333.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
333.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
331.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
331.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
327.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
326.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
325.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
324.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
324.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
323.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
322.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
320.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
319.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
317.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
316.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
315.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
315.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
313.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
313.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
312.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
310.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
310.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
309.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
308.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
308.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
308.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
307.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
307.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
306.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
305.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
304.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
304.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
304.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
302.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
302.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
301.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
300.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
300.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
298.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
298.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
297.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
295.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
294.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
292.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
292.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
291.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
290.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
290.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
290.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
289.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
289.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
285.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
285.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
284.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
283.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
283.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
282.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
280.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
280.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
279.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
279.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
279.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
278.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
278.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
277.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
275.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
274.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
272.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
271.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
270.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
270.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
269.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
268.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
268.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
268.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
267.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
267.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
265.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
265.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
264.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
264.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
261.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
260.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
259.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
259.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
259.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
259.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
258.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
258.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
257.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
257.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
256.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
255.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
254.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
254.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
253.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
253.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
253.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
252.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
252.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
252.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
251.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
251.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
251.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
251.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
248.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
248.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
248.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
247.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
245.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
244.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
243.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
241.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
240.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
239.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
237.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
236.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
236.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
234.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
234.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
232.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
230.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
227.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
227.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
227.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
227.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
226.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
226.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
226.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
225.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
225.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
225.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
224.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
224.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
223.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
222.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
221.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
221.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
220.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
219.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
218.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
218.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
218.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
216.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
215.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
213.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
213.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
213.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
212.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
212.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
211.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
211.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
210.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
209.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
209.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
208.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
208.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
208.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
208.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
207.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
207.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
206.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
205.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
204.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
203.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
197.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
197.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
196.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
195.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
194.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
190.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
189.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
189.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
187.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
186.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
186.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
185.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
185.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
182.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
180.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
180.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
180.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
179.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
178.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
177.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
174.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
174.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
173.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
173.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
171.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
171.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
171.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
171.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
171.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
171.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
170.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
168.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
167.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
166.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
166.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
166.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
165.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
165.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
164.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
163.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
162.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
161.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
160.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
159.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
158.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
157.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
157.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
155.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
154.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
153.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
152.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
151.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
151.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
151.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
150.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
146.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
146.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
145.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
145.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
139.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
139.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
139.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
138.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
138.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
137.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
134.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
133.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
132.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
130.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
129.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
128.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
125.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
122.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
122.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
121.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
117.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
115.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
115.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
113.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
110.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
106.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
105.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
100.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
96.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
90.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
87.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL22 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
162.1
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
434.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
433.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
405.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
401.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
386.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
355.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
355.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
352.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
341.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
336.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
330.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
314.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
305.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
298.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
296.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
291.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
286.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
284.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
282.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
281.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
276.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
275.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
275.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
272.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
272.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
266.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
264.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
263.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
261.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
254.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
252.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
246.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
245.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
243.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
242.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
238.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
237.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
237.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
235.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
232.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
229.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
228.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
227.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
223.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
219.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
218.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
216.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
213.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
212.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
211.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
210.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
206.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
204.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
200.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
200.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
200.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
196.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
196.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
194.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
193.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
192.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
190.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
188.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
188.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
188.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
187.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
186.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
183.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
183.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
182.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
180.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
179.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
179.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
178.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
177.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
177.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
175.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
174.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
173.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
172.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
168.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
166.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
166.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
165.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
165.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
165.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
164.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
162.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
162.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
160.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
159.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
158.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
158.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
158.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
157.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
156.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
156.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
155.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
155.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
154.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
153.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
149.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
149.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
148.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
147.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
146.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
146.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
146.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
146.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
146.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
146.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
146.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
145.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
144.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
142.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
141.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
141.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
140.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
140.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
139.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
138.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
138.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
138.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
138.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
137.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
137.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
137.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
136.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
136.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
135.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
135.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
135.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
135.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
134.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
133.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
132.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
132.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
131.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
131.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
129.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
129.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
128.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
127.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
127.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
127.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
127.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
126.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
126.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
125.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
125.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
125.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
124.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
124.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
123.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
123.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
123.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
123.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
123.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
120.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
119.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
119.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
119.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
119.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
118.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
117.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
116.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
116.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
116.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
115.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
114.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
114.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
113.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
113.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
112.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
111.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
109.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
108.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
108.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
106.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
105.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
105.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
103.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
103.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
102.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
102.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
101.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
101.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
100.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
100.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
99.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
98.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
95.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
95.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
95.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
95.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
93.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
92.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
91.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
90.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
90.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
89.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
88.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
86.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
85.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
85.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
84.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
83.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
83.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
82.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
82.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
80.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
79.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
76.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
76.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
76.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
74.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
74.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
71.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
70.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
69.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
68.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
63.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
61.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
57.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
54.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
51.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
51.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
50.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
43.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
41.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
33.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
0.6
1021
Tumor
0.4
557
Tumor
0.4
567
Tumor
0.3
713
Tumor
0.3
1027
Tumor
0.3
131
Tumor
0.3
686
Normal
0.2
1025
Tumor
0.2
554
Normal
0.2
721
Tumor
0.2
696
Normal
0.2
367
Tumor
0.2
172
Normal
0.2
534
Normal
0.2
533
Tumor
0.1
926
Normal
0.1
428
Normal
0.1
267
Tumor
0.1
938
Normal
0.1
342
Normal
0.1
1041
Tumor
0.1
387
Tumor
0.1
113
Tumor
0.1
376
Normal
0.1
413
Tumor
0.1
327
Tumor
0.1
922
Normal
0.1
186
Normal
0.1
414
Normal
0.1
451
Tumor
0.1
352
Normal
0.1
924
Normal
0.1
394
Normal
0.1
661
Tumor
0.1
425
Tumor
0.1
452
Normal
0.1
368
Normal
0.1
353
Tumor
0.1
455
Tumor
0.1
171
Tumor
0.1
392
Normal
0.1
223
Tumor
0.1
271
Tumor
0.1
477
Tumor
0.1
537
Tumor
0.1
865
Tumor
0.1
135
Tumor
0.1
343
Tumor
0.1
147
Tumor
0.1
662
Normal
0.1
443
Tumor
0.1
697
Tumor
0.1
573
Tumor
0.1
944
Normal
0.1
953
Tumor
0.1
227
Tumor
0.1
464
Normal
0.1
918
Normal
0.0
571
Tumor
0.0
1026
Normal
0.0
1042
Normal
0.0
375
Tumor
0.0
393
Tumor
0.0
951
Tumor
0.0
358
Normal
0.0
1031
Tumor
0.0
925
Tumor
0.0
257
Tumor
0.0
128
Normal
0.0
136
Normal
0.0
366
Normal
0.0
188
Normal
0.0
536
Normal
0.0
473
Tumor
0.0
695
Tumor
0.0
214
Normal
0.0
958
Normal
0.0
474
Normal
0.0
467
Tumor
0.0
956
Normal
0.0
258
Normal
0.0
481
Tumor
0.0
362
Normal
0.0
138
Normal
0.0
391
Tumor
0.0
494
Normal
0.0
354
Normal
0.0
185
Tumor
0.0
361
Tumor
0.0
421
Tumor
0.0
671
Tumor
0.0
395
Tumor
0.0
737
Tumor
0.0
386
Normal
0.0
114
Normal
0.0
527
Tumor
0.0
396
Normal
0.0
112
Tumor
0.0
968
Normal
0.0
716
Normal
0.0
262
Normal
0.0
272
Normal
0.0
357
Tumor
0.0
427
Tumor
0.0
1046
Normal
0.0
723
Tumor
0.0
546
Normal
0.0
331
Tumor
0.0
535
Tumor
0.0
915
Tumor
0.0
714
Normal
0.0
228
Normal
0.0
952
Normal
0.0
341
Tumor
0.0
742
Normal
0.0
424
Normal
0.0
137
Tumor
0.0
937
Tumor
0.0
132
Normal
0.0
162
Normal
0.0
1022
Normal
0.0
284
Normal
0.0
344
Normal
0.0
698
Normal
0.0
161
Tumor
0.0
722
Normal
0.0
471
Tumor
0.0
1032
Normal
0.0
923
Tumor
0.0
1028
Normal
0.0
465
Tumor
0.0
212
Normal
0.0
526
Normal
0.0
388
Normal
0.0
111
Normal
0.0
864
Normal
0.0
738
Normal
0.0
538
Normal
0.0
664
Normal
0.0
433
Tumor
0.0
351
Tumor
0.0
666
Normal
0.0
448
Normal
0.0
517
Tumor
0.0
124
Normal
0.0
647
Tumor
0.0
142
Normal
-0.1
965
Tumor
-0.1
957
Tumor
-0.1
412
Normal
-0.1
981
Tumor
-0.1
422
Normal
-0.1
461
Tumor
-0.1
636
Normal
-0.1
964
Normal
-0.1
224
Normal
-0.1
232
Normal
-0.1
524
Normal
-0.1
365
Tumor
-0.1
466
Normal
-0.1
148
Normal
-0.1
268
Normal
-0.1
468
Normal
-0.1
954
Normal
-0.1
484
Normal
-0.1
545
Tumor
-0.1
385
Tumor
-0.1
125
Tumor
-0.1
916
Normal
-0.1
967
Tumor
-0.1
456
Normal
-0.1
955
Tumor
-0.1
222
Normal
-0.1
187
Tumor
-0.1
213
Tumor
-0.1
446
Normal
-0.1
436
Normal
-0.1
513
Tumor
-0.1
728
Normal
-0.1
126
Normal
-0.1
483
Tumor
-0.1
285
Tumor
-0.1
914
Normal
-0.1
862
Normal
-0.1
497
Tumor
-0.1
286
Normal
-0.1
745
Tumor
-0.1
743
Tumor
-0.1
528
Normal
-0.1
921
Tumor
-0.1
431
Tumor
-0.1
463
Tumor
-0.1
363
Tumor
-0.1
983
Tumor
-0.1
411
Tumor
-0.1
858
Normal
-0.1
873
Tumor
-0.1
514
Normal
-0.1
423
Tumor
-0.1
663
Tumor
-0.1
145
Tumor
-0.1
868
Normal
-0.1
426
Normal
-0.1
778
Normal
-0.1
488
Normal
-0.1
196
Normal
-0.1
553
Tumor
-0.1
432
Normal
-0.1
823
Tumor
-0.1
618
Normal
-0.1
141
Tumor
-0.1
963
Tumor
-0.1
123
Tumor
-0.1
518
Normal
-0.1
727
Tumor
-0.1
383
Tumor
-0.1
966
Normal
-0.1
943
Tumor
-0.1
462
Normal
-0.1
492
Normal
-0.1
482
Normal
-0.1
785
Tumor
-0.1
756
Normal
-0.2
813
Tumor
-0.2
1043
Tumor
-0.2
435
Tumor
-0.2
298
Normal
-0.2
1013
Tumor
-0.2
221
Tumor
-0.2
648
Normal
-0.2
127
Tumor
-0.2
472
Normal
-0.2
724
Normal
-0.2
364
Normal
-0.2
434
Normal
-0.2
217
Tumor
-0.2
525
Tumor
-0.2
278
Normal
-0.2
195
Tumor
-0.2
332
Normal
-0.2
384
Normal
-0.2
231
Tumor
-0.2
1016
Normal
-0.2
715
Tumor
-0.2
146
Normal
-0.2
746
Normal
-0.2
493
Tumor
-0.2
211
Tumor
-0.2
635
Tumor
-0.2
1014
Normal
-0.2
863
Tumor
-0.2
487
Tumor
-0.2
356
Normal
-0.2
283
Tumor
-0.2
515
Tumor
-0.2
777
Tumor
-0.2
817
Tumor
-0.2
218
Normal
-0.2
558
Normal
-0.2
867
Tumor
-0.2
355
Tumor
-0.2
913
Tumor
-0.2
617
Tumor
-0.2
984
Normal
-0.2
1045
Tumor
-0.2
977
Tumor
-0.2
516
Normal
-0.2
498
Normal
-0.2
1015
Tumor
-0.2
478
Normal
-0.2
982
Normal
-0.2
755
Tumor
-0.2
976
Normal
-0.2
665
Tumor
-0.3
861
Tumor
-0.3
672
Normal
-0.3
877
Tumor
-0.3
444
Normal
-0.3
814
Normal
-0.3
615
Tumor
-0.3
261
Tumor
-0.3
628
Normal
-0.3
563
Tumor
-0.3
415
Tumor
-0.3
627
Tumor
-0.3
874
Normal
-0.3
744
Normal
-0.3
815
Tumor
-0.3
642
Normal
-0.3
445
Tumor
-0.3
564
Normal
-0.3
523
Tumor
-0.3
1044
Normal
-0.3
491
Tumor
-0.3
574
Normal
-0.3
313
Tumor
-0.3
277
Tumor
-0.3
312
Normal
-0.3
852
Normal
-0.3
975
Tumor
-0.3
851
Tumor
-0.3
297
Tumor
-0.3
866
Normal
-0.3
878
Normal
-0.3
641
Tumor
-0.3
328
Normal
-0.3
978
Normal
-0.4
416
Normal
-0.4
616
Normal
-0.4
314
Normal
-0.4
818
Normal
-0.4
741
Tumor
-0.4
786
Normal
-0.4
568
Normal
-0.4
857
Tumor
-0.4
191
Tumor
-0.4
447
Tumor
-0.4
883
Tumor
-0.4
882
Normal
-0.5
572
Normal
-0.5
912
Normal
-0.5
824
Normal
-0.5
881
Tumor
-0.5
192
Normal
-0.5
816
Normal
-0.5
917
Tumor
-0.5
311
Tumor
-0.6
911
Tumor
-0.7
884
Normal
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.