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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
120.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
408.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
200.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
180.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
173.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
170.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
167.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
166.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
163.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
157.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
156.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
152.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
151.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
150.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
148.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
146.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
146.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
145.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
143.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
142.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
141.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
140.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
138.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
137.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
131.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
129.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
124.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
124.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
123.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
120.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
116.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
115.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
114.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
113.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
112.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
111.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
110.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
110.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
109.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
106.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
106.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
106.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
105.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
99.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
99.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
98.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
97.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
93.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
88.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
88.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
84.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
84.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
82.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
79.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
79.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
76.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
74.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
70.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
69.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
66.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
62.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
56.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
54.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
50.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCP2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
144.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
895.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
502.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
274.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
267.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
264.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
264.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
259.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
256.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
255.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
251.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
248.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
246.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
246.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
244.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
241.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
241.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
240.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
239.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
235.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
232.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
231.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
231.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
226.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
225.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
225.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
225.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
225.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
224.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
224.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
223.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
221.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
221.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
217.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
214.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
213.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
212.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
211.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
210.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
209.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
209.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
207.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
206.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
206.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
205.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
202.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
202.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
202.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
201.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
201.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
201.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
200.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
199.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
198.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
198.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
198.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
198.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
197.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
197.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
197.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
197.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
197.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
196.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
196.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
194.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
194.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
193.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
193.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
192.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
192.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
192.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
192.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
192.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
191.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
191.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
191.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
191.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
190.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
188.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
188.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
188.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
188.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
187.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
187.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
186.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
185.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
185.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
185.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
185.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
184.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
184.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
184.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
184.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
183.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
183.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
182.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
182.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
182.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
182.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
181.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
181.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
181.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
180.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
179.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
179.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
179.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
179.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
178.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
178.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
177.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
177.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
177.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
176.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
176.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
176.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
176.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
176.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
176.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
176.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
176.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
175.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
175.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
175.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
175.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
175.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
174.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
173.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
173.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
173.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
173.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
173.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
173.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
173.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
173.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
172.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
171.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
171.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
171.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
171.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
170.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
170.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
169.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
169.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
168.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
168.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
168.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
167.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
167.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
166.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
166.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
166.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
166.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
166.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
166.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
165.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
165.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
165.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
165.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
165.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
165.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
165.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
165.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
165.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
164.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
164.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
164.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
163.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
163.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
163.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
163.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
163.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
163.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
162.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
162.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
162.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
162.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
162.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
162.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
161.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
161.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
160.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
160.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
160.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
160.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
160.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
160.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
159.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
158.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
158.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
158.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
158.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
157.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
157.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
157.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
156.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
156.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
156.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
156.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
156.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
156.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
156.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
156.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
156.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
155.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
155.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
155.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
155.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
154.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
154.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
154.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
154.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
154.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
154.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
153.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
153.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
153.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
153.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
153.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
153.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
152.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
152.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
152.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
152.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
152.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
152.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
151.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
151.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
151.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
151.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
151.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
150.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
149.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
149.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
149.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
148.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
148.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
148.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
147.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
147.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
147.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
147.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
147.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
147.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
147.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
147.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
147.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
146.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
146.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
146.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
146.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
146.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
146.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
145.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
145.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
145.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
144.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
144.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
144.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
144.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
144.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
144.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
144.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
144.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
143.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
143.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
143.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
143.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
143.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
143.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
141.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
141.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
141.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
140.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
140.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
140.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
140.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
140.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
139.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
139.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
138.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
138.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
138.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
138.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
138.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
138.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
138.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
137.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
137.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
136.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
136.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
136.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
136.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
135.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
135.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
135.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
135.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
135.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
134.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
134.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
133.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
133.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
133.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
132.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
132.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
132.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
132.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
132.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
132.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
132.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
132.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
131.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
131.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
131.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
130.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
130.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
130.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
130.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
130.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
130.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
129.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
129.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
129.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
129.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
129.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
129.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
129.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
129.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
129.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
128.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
128.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
127.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
127.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
127.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
127.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
127.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
127.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
127.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
126.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
126.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
126.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
126.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
126.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
126.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
125.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
125.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
125.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
125.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
125.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
124.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
124.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
124.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
124.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
123.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
123.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
123.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
123.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
123.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
122.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
122.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
122.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
122.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
122.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
122.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
122.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
122.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
121.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
121.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
121.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
121.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
121.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
121.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
120.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
120.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
120.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
120.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
119.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
119.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
119.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
118.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
118.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
118.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
118.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
118.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
117.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
117.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
116.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
116.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
115.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
115.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
114.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
114.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
113.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
113.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
113.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
113.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
113.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
113.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
113.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
112.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
112.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
112.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
111.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
111.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
110.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
110.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
110.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
110.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
109.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
109.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
109.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
109.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
108.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
108.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
108.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
107.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
107.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
107.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
106.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
106.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
106.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
106.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
105.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
105.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
105.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
104.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
103.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
103.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
103.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
103.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
102.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
102.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
102.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
101.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
101.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
101.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
100.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
99.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
98.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
98.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
98.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
98.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
97.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
97.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
97.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
95.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
95.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
95.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
92.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
92.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
92.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
90.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
90.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
90.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
89.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
88.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
88.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
88.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
87.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
87.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
87.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
86.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
86.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
86.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
84.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
83.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
83.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
83.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
82.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
82.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
82.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
82.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
81.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
81.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
79.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
78.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
75.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
75.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
74.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
73.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
72.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
72.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
72.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
71.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
71.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
70.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
69.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
69.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
68.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
67.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
67.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
65.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
64.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
64.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
63.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
63.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
62.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
61.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
60.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
60.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
59.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
56.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
56.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
55.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
55.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
55.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
54.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
54.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
53.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
53.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
51.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
51.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
50.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
48.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
48.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
46.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
44.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
37.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
36.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
36.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
32.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
26.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
176.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
305.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
299.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
287.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
285.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
277.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
259.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
258.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
251.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
251.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
245.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
244.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
240.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
238.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
236.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
230.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
228.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
220.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
217.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
215.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
214.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
211.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
211.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
205.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
205.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
204.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
203.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
202.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
202.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
199.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
198.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
195.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
194.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
194.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
191.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
187.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
187.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
187.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
185.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
185.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
185.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
182.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
181.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
178.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
177.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
177.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
177.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
177.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
176.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
175.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
174.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
174.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
174.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
174.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
173.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
170.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
170.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
169.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
167.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
167.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
166.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
165.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
165.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
163.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
162.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
159.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
158.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
158.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
157.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
155.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
154.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
148.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
146.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
142.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
141.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
138.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
137.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
135.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
133.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
132.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
132.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
131.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
129.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
127.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
125.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
122.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
122.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
120.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
120.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
119.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
119.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
115.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
115.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
115.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
113.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
111.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
101.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
99.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
73.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
70.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
131.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
388.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
345.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
291.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
291.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
274.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
256.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
244.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
244.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
243.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
237.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
236.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
235.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
225.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
219.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
218.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
214.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
214.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
213.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
213.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
212.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
211.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
207.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
205.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
205.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
205.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
199.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
197.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
194.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
194.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
193.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
193.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
193.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
192.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
189.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
186.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
186.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
186.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
186.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
185.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
185.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
185.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
185.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
184.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
184.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
183.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
182.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
181.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
181.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
180.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
180.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
179.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
178.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
177.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
177.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
176.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
176.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
176.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
175.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
173.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
172.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
171.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
170.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
169.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
169.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
168.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
167.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
166.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
164.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
164.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
162.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
162.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
161.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
161.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
161.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
159.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
159.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
159.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
159.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
159.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
158.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
158.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
158.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
157.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
157.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
157.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
156.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
156.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
156.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
155.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
155.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
154.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
154.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
153.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
153.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
153.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
153.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
153.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
153.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
152.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
152.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
150.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
149.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
149.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
149.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
148.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
147.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
147.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
145.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
145.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
145.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
145.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
142.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
141.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
141.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
139.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
139.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
139.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
139.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
138.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
138.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
138.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
137.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
137.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
137.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
136.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
135.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
135.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
135.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
134.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
134.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
133.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
133.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
132.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
132.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
132.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
131.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
130.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
129.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
129.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
129.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
128.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
128.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
126.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
126.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
126.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
126.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
125.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
125.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
124.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
124.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
124.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
124.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
124.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
124.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
124.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
123.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
123.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
122.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
121.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
121.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
121.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
121.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
121.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
120.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
119.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
119.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
118.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
118.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
118.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
117.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
116.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
116.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
115.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
115.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
115.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
114.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
114.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
113.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
109.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
109.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
109.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
109.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
109.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
108.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
108.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
108.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
108.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
108.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
107.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
107.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
106.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
106.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
105.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
105.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
105.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
104.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
103.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
103.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
103.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
102.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
101.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
101.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
101.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
101.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
99.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
99.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
97.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
97.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
96.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
96.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
95.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
94.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
93.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
92.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
91.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
90.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
89.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
89.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
88.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
88.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
88.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
88.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
87.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
84.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
83.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
83.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
82.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
81.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
81.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
80.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
80.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
79.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
78.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
77.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
73.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
72.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
72.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
72.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
71.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
71.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
69.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
68.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
68.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
68.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
67.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
67.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
67.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
67.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
67.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
66.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
66.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
65.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
62.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
62.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
59.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
58.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
57.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
57.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
57.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
55.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
54.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
54.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
53.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
52.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
52.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
50.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
49.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
48.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
46.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
45.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
44.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
41.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
40.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
40.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026420001
Normal
0.9
CPT0078800003
Tumor
0.9
CPT0009080003
Normal
0.9
CPT0012570003
Normal
0.7
CPT0092800003
Normal
0.7
CPT0012770003
Normal
0.7
CPT0000890001
Normal
0.6
CPT0012090003
Normal
0.6
CPT0092310003
Normal
0.6
CPT0088920001
Normal
0.6
CPT0078840001
Normal
0.6
CPT0088780001
Normal
0.6
CPT0025610001
Normal
0.6
CPT0087050003
Normal
0.6
CPT0066430001
Normal
0.6
CPT0025060001
Normal
0.6
CPT0013790003
Normal
0.6
CPT0065450001
Normal
0.6
CPT0077140001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0079430001
Normal
0.6
CPT0076350001
Normal
0.5
CPT0092740003
Normal
0.5
CPT0077500001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0017450001
Normal
0.5
CPT0014350001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0020020001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0023360001
Normal
0.5
CPT0014130001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0082010001
Normal
0.4
CPT0023710001
Normal
0.4
CPT0086890003
Normal
0.4
CPT0069010001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0064400001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0089480003
Normal
0.4
CPT0018250001
Normal
0.4
CPT0007320003
Tumor
0.4
CPT0088710001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0078940001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0086370003
Normal
0.3
CPT0009060003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0012900004
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0009020003
Normal
0.2
CPT0012920003
Normal
0.2
CPT0066520001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0025920001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0002370001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0064370003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0001550001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0076330003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0078830003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0092790003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0009000003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0084590001
Normal
-0.4
CPT0007860003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0092160003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0078930003
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0077490003
Tumor
-0.6
CPT0077320001
Normal
-0.6
CPT0011240003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0081990003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0000780007
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0025230003
Tumor
-0.6
CPT0014450004
Tumor
-0.7
CPT0025350003
Tumor
-0.7
CPT0021240003
Tumor
-0.7
CPT0015910003
Tumor
-0.7
CPT0077110003
Tumor
-0.7
CPT0088630003
Tumor
-0.7
CPT0075130003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0001340003
Tumor
-0.7
CPT0088550004
Tumor
-0.8
CPT0065690003
Tumor
-0.8
CPT0079230003
Tumor
-0.8
CPT0079410003
Tumor
-0.8
CPT0088760003
Tumor
-0.8
CPT0065930003
Tumor
-0.8
CPT0025580004
Tumor
-0.8
CPT0010160003
Tumor
-0.8
CPT0017850003
Tumor
-0.9
CPT0012670003
Tumor
-0.9
CPT0014160003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0000640003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
