HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:42.4 nTPM
HPA Brain:77.9 nTPM
GTEx:42.4 nTPM
FANTOM5:78.8 Scaled Tags Per Million
Pig:67.7 nTPM
Mouse:87.5 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015827
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 77.9
Sample id Sample description nTPM
Hippocampus
nTPM: 71.7
1898 Male, age 80, left hemisphere 90.8
1855 Male, age 76, left hemisphere 76.8
2529 Female, age 94, left hemisphere 75.1
1911 Female, age 85, right hemisphere 65.9
2148 Female, age 91, left hemisphere 61.5
2621 Female, age 67, right hemisphere 59.8
Dentate gyrus
nTPM: 77.9
2530 Female, age 94, left hemisphere 127.2
2010 Male, age 76, both hemispheres 105.1
2531 Female, age 67, both hemispheres 67.2
1927 Female, age 91, both hemispheres 61.6
2246 Female, age 85, both hemispheres 59.5
2528 Male, age 74, both hemispheres 46.7
Entorhinal gyrus
nTPM: 59.4
2686 Male, age 75, right hemisphere 74.1
1787 Male, age 76, left hemisphere 61.9
1938 Female, age 85, left hemisphere 59.1
2764 Male, age 80, right hemisphere 57.8
2117 Female, age 91, right hemisphere 56.8
2613 Female, age 94, left hemisphere 46.9
Hippocampus, CA1
nTPM: 70.1
2749 Male, age 80, left hemisphere 95.1
2045 Male, age 76, both hemispheres 77.4
1873 Female, age 85, both hemispheres 71.1
2082 Female, age 91, right hemisphere 63.5
2527 Male, age 74, both hemispheres 43.1
Hippocampus, CA2
nTPM: 70.0
1963 Male, age 80, left hemisphere 96.5
1892 Male, age 76, both hemispheres 83.9
2437 Female, age 94, left hemisphere 74.0
1940 Female, age 85, left hemisphere 60.2
2113 Female, age 91, right hemisphere 53.0
2249 Male, age 74, both hemispheres 52.3
Hippocampus, CA3
nTPM: 64.7
1867 Male, age 76, both hemispheres 81.5
2137 Male, age 80, left hemisphere 76.2
1891 Female, age 85, both hemispheres 62.4
2861 Female, age 67, both hemispheres 61.6
2620 Female, age 94, left hemisphere 58.4
2436 Male, age 74, both hemispheres 48.4
Parahippocampal cortex
nTPM: 57.5
2018 Male, age 76, both hemispheres 85.4
1850 Male, age 80, both hemispheres 65.9
2532 Female, age 72, left hemisphere 64.8
1933 Female, age 85, both hemispheres 60.1
1990 Female, age 91, right hemisphere 56.8
2245 Female, age 91, both hemispheres 54.0
2692 Male, age 74, both hemispheres 52.8
2622 Female, age 67, right hemisphere 49.7
2693 Female, age 94, both hemispheres 44.9
2250 Female, age 67, right hemisphere 41.0
Perirhinal gyrus
nTPM: 54.9
1794 Male, age 80, right hemisphere 59.7
1847 Female, age 91, left hemisphere 59.0
2848 Male, age 76, right hemisphere 58.0
1841 Female, age 85, right hemisphere 56.7
2521 Female, age 94, right hemisphere 41.1
Subiculum
nTPM: 63.5
2042 Male, age 76, both hemispheres 82.6
1901 Male, age 80, both hemispheres 67.7
2729 Female, age 91, right hemisphere 64.0
1977 Female, age 85, both hemispheres 63.7
2438 Female, age 94, left hemisphere 62.0
2619 Male, age 74, both hemispheres 40.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 42.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.4
Samples: 197

Max nTPM: 178.5
Min nTPM: 11.0
Std nTPM: 24.8
Median nTPM: 35.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 178.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 168.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 123.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 116.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 110.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 108.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 106.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 102.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 95.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 94.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 93.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 78.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.8
FF:10153-102I9 76 years, female 82.8
FF:10169-103B7 60 years, female 74.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 67.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 42.1
Min nTPM: 29.6
Sample A Female 42.1
Sample B Female 40.0
Sample C Male 29.6
Sample D Male 35.7
Dorsal hippocampus
nTPM: 67.7
Samples: 4

Max nTPM: 96.7
Min nTPM: 32.8
Sample A Female 96.7
Sample B Female 58.0
Sample C Male 83.2
Sample D Male 32.8
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 41.6
Min nTPM: 30.9
Sample A Female 30.9
Sample B Female 41.6
Sample C Male 32.8
Sample D Male 37.6
Ventral hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 58.9
Min nTPM: 30.6
Sample A Female 50.1
Sample B Female 30.6
Sample C Male 36.9
Sample D Male 58.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 87.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.0
Samples: 4

Max nTPM: 85.3
Min nTPM: 76.3
Sample A Male 85.3
Sample B Male 76.3
Sample C Female 79.2
Sample D Female 83.3
Hippocampal formation
nTPM: 87.6
Samples: 4

Max nTPM: 99.4
Min nTPM: 80.3
Sample A Male 88.7
Sample B Male 81.8
Sample C Female 99.4
Sample D Female 80.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
75990672 Antisense, RP_060608_01_E11, Mouse strain C57BL/6J (56 days, male) 4.3

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