HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:37.0 nTPM
HPA Brain:33.3 nTPM
GTEx:37.0 nTPM
FANTOM5:52.2 Scaled Tags Per Million
Pig:39.8 nTPM
Mouse:75.6 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020451Antibody HPA029804Antibody HPA029805
Glial cells LowLowLow
Neuronal cells HighHighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.3
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
1898 Male, age 80, left hemisphere 41.2
2148 Female, age 91, left hemisphere 33.6
1855 Male, age 76, left hemisphere 33.4
1911 Female, age 85, right hemisphere 31.5
2529 Female, age 94, left hemisphere 30.3
2621 Female, age 67, right hemisphere 29.8
Dentate gyrus
nTPM: 25.3
2010 Male, age 76, both hemispheres 36.4
2528 Male, age 74, both hemispheres 27.5
1927 Female, age 91, both hemispheres 26.1
2246 Female, age 85, both hemispheres 25.0
2530 Female, age 94, left hemisphere 21.4
2531 Female, age 67, both hemispheres 15.6
Entorhinal gyrus
nTPM: 22.7
1938 Female, age 85, left hemisphere 31.5
2117 Female, age 91, right hemisphere 30.2
1787 Male, age 76, left hemisphere 23.5
2764 Male, age 80, right hemisphere 19.8
2686 Male, age 75, right hemisphere 19.0
2613 Female, age 94, left hemisphere 11.9
Hippocampus, CA1
nTPM: 31.9
2527 Male, age 74, both hemispheres 35.8
1873 Female, age 85, both hemispheres 35.7
2749 Male, age 80, left hemisphere 31.0
2045 Male, age 76, both hemispheres 30.4
2082 Female, age 91, right hemisphere 26.6
Hippocampus, CA2
nTPM: 28.7
2249 Male, age 74, both hemispheres 33.1
1940 Female, age 85, left hemisphere 32.1
1892 Male, age 76, both hemispheres 31.8
2113 Female, age 91, right hemisphere 27.9
1963 Male, age 80, left hemisphere 26.1
2437 Female, age 94, left hemisphere 21.2
Hippocampus, CA3
nTPM: 26.3
1867 Male, age 76, both hemispheres 34.4
2436 Male, age 74, both hemispheres 31.2
1891 Female, age 85, both hemispheres 30.5
2137 Male, age 80, left hemisphere 24.6
2620 Female, age 94, left hemisphere 19.9
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 25.5
2018 Male, age 76, both hemispheres 34.1
1933 Female, age 85, both hemispheres 28.3
1850 Male, age 80, both hemispheres 28.2
2245 Female, age 91, both hemispheres 27.3
2250 Female, age 67, right hemisphere 27.3
2622 Female, age 67, right hemisphere 24.8
1990 Female, age 91, right hemisphere 24.2
2692 Male, age 74, both hemispheres 22.4
2693 Female, age 94, both hemispheres 20.8
2532 Female, age 72, left hemisphere 17.6
Perirhinal gyrus
nTPM: 22.4
2521 Female, age 94, right hemisphere 24.7
1841 Female, age 85, right hemisphere 24.4
1794 Male, age 80, right hemisphere 23.3
1847 Female, age 91, left hemisphere 22.1
2848 Male, age 76, right hemisphere 17.7
Subiculum
nTPM: 30.2
2042 Male, age 76, both hemispheres 36.9
2619 Male, age 74, both hemispheres 33.5
1901 Male, age 80, both hemispheres 31.5
2438 Female, age 94, left hemisphere 31.4
2729 Female, age 91, right hemisphere 26.4
1977 Female, age 85, both hemispheres 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 37.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.0
Samples: 197

Max nTPM: 61.1
Min nTPM: 20.8
Std nTPM: 7.4
Median nTPM: 36.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 61.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 57.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 55.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 55.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 53.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 53.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 52.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 52.4
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 52.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 51.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 51.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.2
FF:10153-102I9 76 years, female 55.6
FF:10169-103B7 60 years, female 48.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.8
Pig sample Sample description nTPM
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 42.1
Min nTPM: 33.8
Sample A Female 42.1
Sample B Female 37.2
Sample C Male 33.8
Sample D Male 35.6
Dorsal hippocampus
nTPM: 39.8
Samples: 4

Max nTPM: 45.2
Min nTPM: 32.9
Sample A Female 45.2
Sample B Female 37.4
Sample C Male 43.5
Sample D Male 32.9
Entorhinal cortex
nTPM: 33.1
Samples: 4

Max nTPM: 38.3
Min nTPM: 27.9
Sample A Female 31.5
Sample B Female 38.3
Sample C Male 34.8
Sample D Male 27.9
Ventral hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 40.0
Min nTPM: 33.6
Sample A Female 40.0
Sample B Female 35.7
Sample C Male 33.6
Sample D Male 36.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 75.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.5
Samples: 4

Max nTPM: 70.8
Min nTPM: 60.1
Sample A Male 60.6
Sample B Male 60.1
Sample C Female 70.8
Sample D Female 62.5
Hippocampal formation
nTPM: 75.6
Samples: 4

Max nTPM: 82.5
Min nTPM: 71.5
Sample A Male 82.5
Sample B Male 74.7
Sample C Female 71.5
Sample D Female 73.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
71656067 Antisense, RP_050927_03_E08, Mouse strain C57BL/6J (56 days, male) 3.4

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