HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.3 nTPM
HPA Brain:25.9 nTPM
GTEx:16.3 nTPM
FANTOM5:63.1 Scaled Tags Per Million
Pig:41.7 nTPM
Mouse:50.0 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034494
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.4
1898 Male, age 80, left hemisphere 23.9
1855 Male, age 76, left hemisphere 14.3
2621 Female, age 67, right hemisphere 13.4
2529 Female, age 94, left hemisphere 12.8
2148 Female, age 91, left hemisphere 11.0
1911 Female, age 85, right hemisphere 10.9
Dentate gyrus
nTPM: 13.8
1927 Female, age 91, both hemispheres 18.3
2010 Male, age 76, both hemispheres 16.5
2530 Female, age 94, left hemisphere 13.9
2246 Female, age 85, both hemispheres 13.5
2528 Male, age 74, both hemispheres 11.5
2531 Female, age 67, both hemispheres 8.9
Entorhinal gyrus
nTPM: 17.0
1938 Female, age 85, left hemisphere 21.8
2764 Male, age 80, right hemisphere 21.2
1787 Male, age 76, left hemisphere 18.5
2117 Female, age 91, right hemisphere 14.4
2686 Male, age 75, right hemisphere 13.6
2613 Female, age 94, left hemisphere 12.2
Hippocampus, CA1
nTPM: 15.2
2749 Male, age 80, left hemisphere 22.9
1873 Female, age 85, both hemispheres 14.7
2527 Male, age 74, both hemispheres 14.6
2082 Female, age 91, right hemisphere 12.8
2045 Male, age 76, both hemispheres 11.0
Hippocampus, CA2
nTPM: 16.7
1892 Male, age 76, both hemispheres 21.2
1963 Male, age 80, left hemisphere 17.7
2437 Female, age 94, left hemisphere 17.0
1940 Female, age 85, left hemisphere 15.5
2249 Male, age 74, both hemispheres 15.4
2113 Female, age 91, right hemisphere 13.4
Hippocampus, CA3
nTPM: 13.5
1867 Male, age 76, both hemispheres 18.0
2137 Male, age 80, left hemisphere 17.0
1891 Female, age 85, both hemispheres 15.2
2436 Male, age 74, both hemispheres 11.7
2620 Female, age 94, left hemisphere 10.5
2861 Female, age 67, both hemispheres 8.6
Parahippocampal cortex
nTPM: 18.7
1850 Male, age 80, both hemispheres 28.6
2693 Female, age 94, both hemispheres 24.1
1990 Female, age 91, right hemisphere 22.4
1933 Female, age 85, both hemispheres 19.9
2250 Female, age 67, right hemisphere 19.2
2018 Male, age 76, both hemispheres 17.8
2532 Female, age 72, left hemisphere 17.5
2245 Female, age 91, both hemispheres 16.8
2692 Male, age 74, both hemispheres 13.3
2622 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 25.9
1847 Female, age 91, left hemisphere 30.4
1841 Female, age 85, right hemisphere 27.0
1794 Male, age 80, right hemisphere 26.1
2521 Female, age 94, right hemisphere 23.1
2848 Male, age 76, right hemisphere 22.7
Subiculum
nTPM: 14.8
1977 Female, age 85, both hemispheres 18.8
1901 Male, age 80, both hemispheres 18.0
2619 Male, age 74, both hemispheres 15.2
2042 Male, age 76, both hemispheres 12.8
2438 Female, age 94, left hemisphere 12.0
2729 Female, age 91, right hemisphere 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 27.7
Min nTPM: 9.9
Std nTPM: 3.0
Median nTPM: 15.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 27.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 24.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 24.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 24.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 22.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 22.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 63.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.1
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 51.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 41.7
Pig sample Sample description nTPM
Subiculum
nTPM: 37.8
Samples: 4

Max nTPM: 40.4
Min nTPM: 36.3
Sample A Female 36.3
Sample B Female 37.0
Sample C Male 37.5
Sample D Male 40.4
Dorsal hippocampus
nTPM: 39.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 36.1
Sample A Female 40.0
Sample B Female 39.0
Sample C Male 42.0
Sample D Male 36.1
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 42.5
Min nTPM: 41.1
Sample A Female 42.0
Sample B Female 42.5
Sample C Male 41.1
Sample D Male 41.4
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 47.2
Min nTPM: 36.3
Sample A Female 47.2
Sample B Female 39.0
Sample C Male 38.9
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 50.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.0
Samples: 4

Max nTPM: 55.1
Min nTPM: 46.6
Sample A Male 49.5
Sample B Male 48.8
Sample C Female 46.6
Sample D Female 55.1
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 48.3
Min nTPM: 43.6
Sample A Male 46.1
Sample B Male 48.3
Sample C Female 48.0
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
68924661 Antisense, RP_050303_02_G07, Mouse strain C57BL/6J (56 days, male) 9.0

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