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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKD3 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
7.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
5.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
4.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
4.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKD3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
42.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
35.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
33.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
23.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
22.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
22.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
20.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
20.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
20.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
20.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
19.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
16.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
13.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
12.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
11.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
11.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
10.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
10.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
9.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
9.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
8.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
8.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
8.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
8.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
8.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
8.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
8.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
7.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
7.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
6.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
6.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
6.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
5.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
5.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
5.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
5.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
4.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
4.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
4.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
4.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
4.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
4.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
4.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
4.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
3.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
3.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
3.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
2.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
2.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKD3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
35.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
22.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
19.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
18.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
18.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
17.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
16.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
13.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
6.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
6.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
5.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
4.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
4.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRKD3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
55.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
28.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
27.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
27.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
24.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
20.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
16.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
12.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
12.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
10.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
8.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
8.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
8.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
7.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
7.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
7.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
7.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
7.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
6.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
6.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
6.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
5.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
5.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
4.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
4.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
3.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
3.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
2.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
1.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
