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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPPD1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
113.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
338.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
267.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
263.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
253.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
219.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
196.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
175.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
169.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
167.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
164.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
157.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
156.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
155.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
148.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
147.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
142.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
140.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
139.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
133.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
122.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
121.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
119.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
115.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
115.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
114.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
111.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
111.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
111.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
109.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
109.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
105.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
105.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
105.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
101.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
99.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
99.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
95.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
94.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
94.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
87.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
84.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
83.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
82.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
81.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
79.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
78.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
76.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
76.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
75.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
75.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
73.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
72.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
71.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
68.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
67.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
55.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
52.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
50.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
44.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
39.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
37.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
23.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPPD1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
289.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
276.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
259.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
256.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
251.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
239.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
220.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
215.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
212.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
208.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
202.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
202.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
190.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
178.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
178.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
178.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
177.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
177.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
176.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
175.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
171.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
170.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
169.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
169.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
169.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
166.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
166.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
166.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
165.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
164.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
164.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
163.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
162.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
161.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
161.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
161.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
160.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
160.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
159.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
158.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
156.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
153.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
153.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
153.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
151.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
150.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
150.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
148.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
147.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
146.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
146.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
146.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
145.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
145.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
144.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
144.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
143.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
143.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
143.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
143.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
142.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
142.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
142.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
141.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
140.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
140.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
139.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
139.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
139.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
138.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
138.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
137.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
137.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
137.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
137.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
136.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
135.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
135.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
135.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
134.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
134.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
134.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
133.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
133.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
133.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
133.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
133.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
132.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
132.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
132.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
131.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
131.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
131.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
130.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
130.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
130.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
130.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
130.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
130.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
130.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
129.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
129.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
129.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
129.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
126.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
125.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
125.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
125.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
125.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
124.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
124.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
123.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
123.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
122.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
121.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
121.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
121.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
121.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
120.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
119.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
119.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
119.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
119.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
119.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
117.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
117.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
117.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
117.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
117.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
117.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
117.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
116.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
116.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
115.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
115.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
115.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
115.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
114.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
114.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
114.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
114.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
114.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
113.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
113.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
112.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
112.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
111.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
111.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
111.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
111.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
110.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
110.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
110.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
110.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
110.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
110.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
110.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
109.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
109.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
109.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
109.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
109.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
108.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
108.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
108.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
108.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
108.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
107.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
107.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
107.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
107.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
107.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
107.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
106.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
106.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
106.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
106.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
105.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
105.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
105.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
105.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
105.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
104.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
104.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
104.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
104.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
104.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
103.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
103.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
103.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
103.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
102.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
102.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
102.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
102.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
101.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
101.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
101.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
101.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
100.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
100.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
100.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
100.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
100.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
99.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
99.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
98.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
98.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
98.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
98.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
98.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
97.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
97.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
97.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
97.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
97.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
96.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
96.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
96.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
96.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
96.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
96.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
96.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
96.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
96.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
95.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
95.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
95.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
95.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
95.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
95.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
95.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
95.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
95.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
95.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
95.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
94.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
94.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
93.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
93.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
93.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
93.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
93.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
92.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
91.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
91.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
91.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
91.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
91.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
91.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
90.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
89.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
89.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
89.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
88.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
88.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
88.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
87.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
87.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
87.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
87.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
87.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
87.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
86.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
86.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
86.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
86.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
86.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
85.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
84.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
84.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
84.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
84.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
84.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
84.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
84.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
84.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
83.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
83.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
82.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
82.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
82.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
82.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
82.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
82.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
81.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
81.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
81.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
81.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
81.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
81.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
80.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
80.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
80.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
80.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
80.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
79.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
79.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
78.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
78.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
78.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
78.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
78.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
77.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
77.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
77.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
77.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
76.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
76.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
76.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
76.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
76.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
76.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
76.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
75.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
75.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
75.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
75.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
75.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
75.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
75.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
74.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
74.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
74.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
74.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
74.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
74.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
74.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
73.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
73.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
72.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
71.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
71.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
71.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
71.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
71.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
71.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
70.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
70.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
70.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
69.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
69.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
69.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
69.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
69.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
69.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
69.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
69.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
68.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
68.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
68.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
68.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
68.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
68.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
67.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
67.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
67.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
67.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
66.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
66.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
66.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
65.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
65.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
65.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
65.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
65.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
64.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
64.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
64.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
64.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
64.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
63.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
63.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
63.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
63.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
63.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
63.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
62.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
62.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
62.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
62.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
62.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
62.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
61.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
61.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
61.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
61.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
61.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
61.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
61.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
60.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
60.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
60.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
60.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
59.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
59.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
58.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
58.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
58.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
58.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
58.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
58.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
57.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
57.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
57.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
57.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
57.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
57.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
56.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
56.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
56.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
56.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
56.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
56.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
56.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
56.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
55.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
55.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
55.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
54.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
54.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
54.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
54.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
54.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
54.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
54.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
54.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
54.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
54.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
54.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
53.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
53.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
53.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
52.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
52.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
51.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
51.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
51.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
51.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
50.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
50.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
50.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
50.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
50.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
50.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
50.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
50.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
49.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
49.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
48.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
47.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
47.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
47.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
47.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
46.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
46.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
46.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
46.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
45.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
45.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
45.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
45.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
45.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
44.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
44.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
43.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
43.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
43.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
42.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
42.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
41.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
41.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
41.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
41.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
40.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
40.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
38.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
38.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
38.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
38.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
37.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
37.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
36.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
36.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
36.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
35.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
35.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
34.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
34.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
34.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
33.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
29.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
28.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
28.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
26.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
21.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
19.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPPD1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
234.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
230.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
195.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
190.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
185.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
179.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
166.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
161.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
160.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
151.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
146.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
146.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
145.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
140.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
136.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
136.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
132.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
130.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
124.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
124.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
123.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
122.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
117.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
117.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
114.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
112.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
111.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
110.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
109.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
108.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
104.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
104.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
103.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
103.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
102.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
100.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
100.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
100.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
100.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
97.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
94.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
94.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
94.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
93.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
92.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
88.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
87.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
86.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
84.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
83.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
83.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
80.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
80.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
80.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
79.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
78.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
78.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
78.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
77.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
74.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
74.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
74.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
74.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
73.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
73.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
72.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
72.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
72.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
72.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
72.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
68.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
68.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
68.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
68.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
67.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
66.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
65.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
64.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
63.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
61.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
58.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
55.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
54.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
54.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
51.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
51.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
45.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
45.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
42.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
42.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
37.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
37.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
37.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
35.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNPPD1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
118.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
403.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
371.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
334.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
316.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
299.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
280.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
275.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
261.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
259.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
247.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
236.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
235.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
234.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
234.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
223.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
216.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
210.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
209.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
207.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
201.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
195.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
194.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
189.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
189.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
189.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
188.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
188.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
188.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
186.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
181.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
181.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
179.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
178.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
178.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
175.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
174.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
174.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
173.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
167.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
166.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
166.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
164.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
163.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
162.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
162.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
162.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
161.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
160.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
160.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
158.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
158.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
157.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
157.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
156.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
155.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
154.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
154.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
152.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
151.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
151.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
149.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
147.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
147.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
147.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
147.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
147.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
147.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
146.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
145.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
145.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
143.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
142.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
141.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
140.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
139.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
139.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
139.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
137.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
137.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
136.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
135.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
134.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
134.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
133.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
132.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
132.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
132.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
132.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
129.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
129.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
128.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
127.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
127.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
127.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
126.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
126.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
126.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
125.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
124.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
124.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
124.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
124.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
123.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
123.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
123.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
122.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
121.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
120.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
120.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
120.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
120.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
120.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
119.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
119.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
119.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
117.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
117.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
117.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
116.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
116.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
116.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
114.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
114.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
114.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
114.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
113.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
113.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
113.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
112.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
112.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
111.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
111.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
111.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
111.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
110.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
110.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
108.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
107.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
107.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
107.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
107.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
106.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
106.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
105.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
105.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
103.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
103.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
103.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
103.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
102.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
102.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
101.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
101.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
101.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
101.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
101.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
100.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
100.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
100.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
99.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
99.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
99.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
99.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
98.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
98.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
97.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
97.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
97.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
97.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
97.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
97.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
96.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
95.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
95.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
95.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
95.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
95.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
94.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
94.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
93.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
93.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
93.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
93.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
92.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
92.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
92.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
92.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
92.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
91.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
90.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
90.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
90.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
89.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
89.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
89.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
88.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
88.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
88.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
87.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
87.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
87.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
85.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
85.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
85.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
85.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
84.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
84.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
84.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
84.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
84.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
83.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
83.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
82.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
82.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
82.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
82.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
81.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
81.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
81.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
81.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
79.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
78.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
78.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
78.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
77.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
77.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
76.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
76.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
76.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
76.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
75.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
75.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
74.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
72.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
72.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
71.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
71.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
71.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
71.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
71.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
70.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
68.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
68.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
67.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
67.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
67.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
67.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
66.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
66.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
65.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
65.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
65.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
64.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
64.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
63.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
62.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
62.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
61.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
59.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
58.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
58.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
58.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
57.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
56.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
55.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
54.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
53.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
53.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
53.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
52.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
51.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
51.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
50.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
48.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
46.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
46.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
41.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
37.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
29.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
