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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCT4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
316.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
98.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
89.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
78.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
76.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
71.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
65.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
64.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
63.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
60.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
60.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
59.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
57.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
57.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
55.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
53.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
53.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
52.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
51.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
50.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
50.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
50.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
50.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
47.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
46.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
45.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
45.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
43.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
42.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
42.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
41.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
39.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
37.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
37.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
36.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
36.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
34.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
34.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
33.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
33.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
33.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
32.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
31.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
30.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
29.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
27.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
25.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
25.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
22.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCT4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
187.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
177.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
162.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
158.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
152.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
152.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
150.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
149.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
148.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
145.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
144.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
140.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
140.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
139.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
137.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
136.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
131.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
126.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
124.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
124.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
124.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
122.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
120.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
120.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
119.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
116.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
116.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
115.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
115.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
115.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
114.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
114.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
113.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
113.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
113.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
111.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
111.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
111.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
110.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
110.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
110.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
109.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
108.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
108.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
107.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
107.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
107.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
107.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
106.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
106.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
106.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
106.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
106.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
105.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
105.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
105.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
105.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
104.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
104.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
104.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
104.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
104.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
104.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
103.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
103.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
103.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
103.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
102.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
102.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
102.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
102.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
102.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
101.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
101.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
101.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
101.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
101.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
101.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
100.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
100.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
100.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
100.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
100.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
100.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
99.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
99.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
98.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
98.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
98.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
98.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
98.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
98.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
98.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
97.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
97.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
97.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
97.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
97.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
97.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
96.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
96.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
96.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
96.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
96.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
96.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
96.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
95.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
95.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
95.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
95.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
95.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
95.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
94.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
94.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
94.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
94.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
94.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
94.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
93.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
93.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
93.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
93.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
93.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
93.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
92.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
92.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
92.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
92.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
92.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
92.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
92.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
92.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
91.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
91.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
91.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
91.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
91.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
91.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
91.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
91.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
91.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
91.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
91.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
90.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
90.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
90.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
90.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
90.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
90.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
90.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
89.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
89.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
89.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
89.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
89.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
89.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
89.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
89.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
88.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
88.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
88.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
88.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
88.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
88.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
88.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
88.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
87.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
87.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
87.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
87.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
87.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
87.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
87.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
87.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
87.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
87.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
87.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
87.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
86.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
86.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
86.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
86.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
86.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
86.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
86.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
85.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
85.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
85.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
85.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
85.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
85.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
85.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
85.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
85.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
85.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
85.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
85.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
84.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
84.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
84.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
84.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
84.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
84.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
84.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
83.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
83.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
83.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
83.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
83.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
83.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
83.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
83.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
82.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
82.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
82.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
82.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
82.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
82.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
82.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
82.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
81.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
81.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
81.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
81.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
81.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
81.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
81.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
81.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
80.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
80.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
80.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
80.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
80.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
80.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
79.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
79.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
79.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
79.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
79.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
79.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
79.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
78.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
78.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
78.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
78.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
78.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
78.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
78.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
77.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
77.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
77.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
77.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
77.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
77.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
77.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
77.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
76.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
76.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
76.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
76.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
76.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
76.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
75.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
75.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
75.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
75.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
75.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
75.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
75.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
74.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
74.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
74.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
74.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
74.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
74.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
74.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
74.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
74.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
74.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
74.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
74.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
74.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
74.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
74.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
73.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
73.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
73.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
73.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
73.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
72.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
72.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
72.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
72.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
72.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
72.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
71.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
71.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
71.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
71.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
70.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
70.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
70.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
70.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
70.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
70.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
70.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
69.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
69.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
69.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
69.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
69.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
69.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
69.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
69.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
69.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
68.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
68.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
68.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
68.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
68.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
68.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
68.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
68.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
67.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
67.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
67.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
67.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
67.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
67.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
67.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
66.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
66.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
66.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
66.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
65.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
65.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
65.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
64.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
64.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
64.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
64.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
64.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
63.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
63.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
63.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
63.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
63.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
63.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
63.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
63.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
62.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
62.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
62.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
62.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
61.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
61.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
61.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
61.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
61.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
61.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
61.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
61.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
60.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
60.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
60.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
60.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
60.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
60.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
59.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
59.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
59.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
59.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
59.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
58.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
58.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
58.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
57.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
57.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
57.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
57.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
57.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
57.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
57.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
57.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
56.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
56.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
56.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
56.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
56.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
55.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
55.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
55.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
55.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
55.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
55.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
55.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
54.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
54.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
54.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
54.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
53.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
53.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
53.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
53.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
53.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
52.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
52.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
52.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
52.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
52.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
51.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
51.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
51.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
51.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
51.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
50.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
50.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
50.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
49.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
48.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
48.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
48.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
48.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
48.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
47.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
47.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
47.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
46.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
46.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
46.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
46.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
46.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
45.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
45.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
45.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
45.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
45.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
45.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
45.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
44.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
44.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
43.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
43.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
43.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
43.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
42.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
41.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
41.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
41.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
41.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
40.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
40.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
39.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
39.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
39.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
38.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
37.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
37.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
37.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
36.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
36.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
36.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
36.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
36.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
36.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
35.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
35.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
34.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
33.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
33.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
32.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
32.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
31.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
29.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
27.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
26.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
25.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
25.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
24.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
23.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
21.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
20.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
19.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCT4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
87.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
367.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
155.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
149.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
149.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
139.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
131.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
129.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
124.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
123.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
118.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
116.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
115.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
110.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
109.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
107.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
104.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
104.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
103.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
100.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
100.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
99.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
98.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
96.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
95.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
93.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
93.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
92.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
92.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
91.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
91.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
90.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
90.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
89.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
88.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
87.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
87.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
87.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
86.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
86.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
86.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
85.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
85.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
85.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
85.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
84.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
84.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
84.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
83.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
83.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
82.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
82.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
81.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
81.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
80.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
80.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
78.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
78.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
78.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
77.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
77.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
76.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
75.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
75.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
75.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
75.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
74.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
74.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
74.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
74.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
73.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
72.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
72.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
72.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
71.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
71.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
70.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
69.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
67.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
67.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
67.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
67.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
67.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
65.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
64.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
62.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
62.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
61.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
60.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
58.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
58.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
55.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
52.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
47.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
43.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
36.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCT4 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
171.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
149.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
133.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
126.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
126.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
125.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
123.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
122.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
120.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
119.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
118.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
113.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
111.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
110.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
110.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
107.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
105.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
104.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
103.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
102.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
102.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
101.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
99.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
99.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
96.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
96.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
96.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
95.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
95.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
93.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
93.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
92.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
92.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
91.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
91.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
91.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
90.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
89.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
88.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
88.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
87.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
87.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
86.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
86.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
86.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
84.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
83.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
83.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
81.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
80.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
79.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
79.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
78.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
78.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
78.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
78.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
78.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
77.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
76.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
76.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
75.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
74.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
74.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
74.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
74.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
73.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
73.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
73.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
73.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
73.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
72.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
72.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
72.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
72.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
72.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
72.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
71.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
71.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
71.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
71.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
71.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
70.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
70.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
70.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
70.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
70.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
70.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
69.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
69.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
69.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
68.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
68.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
68.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
68.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
67.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
67.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
66.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
66.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
66.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
66.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
66.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
66.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
65.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
65.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
65.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
65.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
65.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
64.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
63.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
63.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
63.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
63.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
63.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
63.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
63.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
62.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
62.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
62.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
61.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
61.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
60.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
60.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
60.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
60.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
60.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
60.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
60.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
59.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
59.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
58.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
58.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
58.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
58.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
58.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
57.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
57.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
57.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
57.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
57.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
56.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
56.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
56.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
55.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
55.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
55.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
54.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
54.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
54.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
54.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
53.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
53.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
53.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
53.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
53.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
52.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
52.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
52.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
52.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
51.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
51.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
51.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
51.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
51.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
51.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
50.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
50.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
50.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
50.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
50.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
49.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
49.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
49.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
49.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
48.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
48.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
48.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
48.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
48.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
48.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
48.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
47.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
47.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
47.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
47.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
47.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
46.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
46.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
46.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
46.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
46.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
45.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
45.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
45.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
44.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
44.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
43.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
43.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
42.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
42.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
42.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
41.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
40.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
40.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
39.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
38.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
38.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
38.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
37.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
37.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
36.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
36.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
36.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
36.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
35.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
35.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
35.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
34.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
32.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
32.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
32.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
31.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
30.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
29.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
29.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
29.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
29.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
28.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
25.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
25.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
22.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
20.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
20.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
0.7
CPT0021240003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0001540009
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0000640003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0012670003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0079270003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0092740003
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0092790003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0086970003
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0017850003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0087040003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
