We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.0
nTPM
HPA Brain:
317.6
nTPM
GTEx:
49.0
nTPM
FANTOM5:
843.7
Scaled Tags Per Million
Pig:
92.3
nTPM
Mouse:
48.6
nTPM
Allen mouse:
0.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
317.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 257.3
1870
Female, age 42, unknown
331.0
1830
Male, age 51, unknown
317.8
1833
Male, age 53, unknown
305.2
2828
Female, age 72, unknown
293.2
2411
Female, age 72, unknown
289.1
2019
Male, age 18, unknown
265.3
2666
Male, age 74, left hemisphere
222.7
1827
Male, age 72, unknown
197.6
2586
Male, age 75, left hemisphere
183.3
2219
Male, age 76, both hemispheres
167.4
Dorsal raphe nucleus nTPM: 195.4
2750
Male, age 76, both hemispheres
318.5
2016
Female, age 72, unknown
223.1
1828
Male, age 53, unknown
187.0
2298
Female, age 72, unknown
129.9
2047
Male, age 72, unknown
118.6
Inferior colliculus nTPM: 167.2
2849
Male, age 72, unknown
194.3
1848
Female, age 42, unknown
172.5
1890
Male, age 53, unknown
172.2
2097
Female, age 72, unknown
130.0
Median raphe nucleus nTPM: 158.2
2220
Male, age 76, midline
158.2
Periaquaductal grey, anterior nTPM: 181.7
2502
Female, age 75, unknown
223.2
1947
Male, age 18, unknown
176.1
1795
Male, age 51, unknown
145.7
Periaquaductal grey, dorsal nTPM: 165.3
2464
Female, age 72, unknown
200.8
2850
Male, age 76, both hemispheres
195.2
1831
Male, age 72, unknown
153.0
1840
Male, age 53, unknown
112.3
Periaquaductal grey, lateral nTPM: 188.2
2140
Male, age 76, both hemispheres
205.8
2053
Male, age 18, unknown
190.4
2272
Male, age 74, both hemispheres
168.3
Pretectal area nTPM: 186.7
2667
Female, age 75, unknown
261.7
2316
Male, age 76, right hemisphere
254.4
1815
Male, age 53, unknown
226.8
2825
Male, age 18, unknown
190.2
1817
Female, age 42, unknown
183.0
2273
Male, age 74, both hemispheres
179.2
2407
Male, age 75, both hemispheres
179.2
2007
Male, age 72, unknown
162.8
2224
Female, age 72, unknown
157.9
1944
Female, age 72, unknown
139.9
1816
Male, age 51, unknown
118.4
Red nucleus nTPM: 317.6
1865
Male, age 51, unknown
391.5
2769
Male, age 72, unknown
375.7
2227
Male, age 72, unknown
370.9
2823
Male, age 76, right hemisphere
347.1
1904
Male, age 53, unknown
345.9
1821
Female, age 72, unknown
329.4
2503
Female, age 72, unknown
326.2
2785
Male, age 18, unknown
320.7
1954
Female, age 42, unknown
301.9
2588
Male, age 74, left hemisphere
253.4
2584
Male, age 75, left hemisphere
233.0
2725
Female, age 75, unknown
215.1
Substantia nigra nTPM: 203.3
2699
Male, age 18, unknown
276.3
1851
Male, age 51, unknown
244.4
2409
Female, age 72, unknown
240.1
2583
Male, age 75, right hemisphere
211.8
2590
Female, age 75, unknown
196.1
1889
Female, age 72, unknown
192.8
1941
Male, age 53, unknown
187.2
2241
Male, age 72, unknown
168.2
1916
Female, age 42, unknown
166.3
2665
Male, age 74, both hemispheres
149.3
Superior colliculus nTPM: 225.1
1913
Female, age 42, unknown
374.9
1995
Male, age 72, unknown
347.5
1895
Male, age 76, right hemisphere
241.5
1839
Male, age 51, unknown
237.2
2587
Male, age 74, left hemisphere
228.2
1796
Male, age 53, unknown
200.0
2668
Female, age 75, unknown
176.0
2664
Male, age 75, both hemispheres
156.1
2087
Female, age 72, unknown
154.0
2261
Male, age 18, unknown
135.8
Ventral tegmental area nTPM: 224.6
2223
Female, age 72, unknown
283.2
2410
Female, age 72, unknown
270.9
2218
Male, age 76, both hemispheres
202.7
2021
Male, age 53, unknown
202.5
1915
Female, age 42, unknown
194.8
1942
Male, age 51, unknown
193.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 49.0
Samples: 139
Max nTPM: 171.5
Min nTPM: 14.9
Std nTPM: 22.4
Median nTPM: 44.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
171.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
114.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
106.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
106.4
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
97.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
91.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
89.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
85.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
84.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
82.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
81.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
79.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
78.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
77.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
74.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
74.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
73.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
72.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
71.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
71.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
71.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
70.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
68.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
67.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
67.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
66.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
63.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
63.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
62.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
62.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
61.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
61.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
60.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
59.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
59.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
59.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
59.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
59.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
58.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
58.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
57.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
56.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
56.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
55.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
55.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
55.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
55.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
54.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
53.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
53.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
53.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
52.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
51.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
51.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
51.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
51.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
50.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
50.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
49.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
49.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
47.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
47.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
47.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
47.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
46.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
46.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
46.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
45.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
44.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
44.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
44.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
44.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
44.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
43.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
43.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
42.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
42.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
41.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
41.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
41.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
41.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
40.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
40.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
40.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
39.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
39.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
39.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
39.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
38.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
38.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
38.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
37.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
36.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
35.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
35.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
35.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
34.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
34.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
34.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
33.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
33.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
33.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
33.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
33.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
32.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
32.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
32.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
31.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
30.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
30.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
30.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
30.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
29.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
29.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
29.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
29.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
29.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
29.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
29.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
29.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
29.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
28.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
28.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
28.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
27.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
27.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
25.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
24.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
23.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
22.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
22.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
22.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
21.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
21.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
18.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
18.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
17.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
16.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
14.9
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 48.6
Samples: 4
Max nTPM: 50.7
Min nTPM: 45.2
Sample A
Male
50.7
Sample B
Male
45.2
Sample C
Female
48.9
Sample D
Female
49.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.