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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
27.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
27.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
10.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
10.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
7.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
46.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
33.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
26.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
24.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
23.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
23.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
23.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
21.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
20.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
20.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
20.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
19.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
18.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
18.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
18.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
18.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
17.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
16.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
16.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
15.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
15.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
14.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
11.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
29.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
25.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
23.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
21.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
19.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
17.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
20.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
20.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
15.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
12.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
11.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
11.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
11.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
8.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
8.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
7.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
6.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
