We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC31 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
33.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
23.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
23.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
20.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
19.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
18.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
18.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
17.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
17.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
16.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
16.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
15.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
15.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
15.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
13.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
12.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
12.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
12.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
12.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
12.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
11.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
11.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
11.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
10.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
9.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
8.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
8.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
8.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
7.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
7.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
7.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
7.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
6.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
5.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
5.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
4.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
4.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
4.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC31 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.2
Number of samples
231
Samples
Sample
Description
TPM
DO23534
0 years, male, NA, stage:2, alive, 840 days
111.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
111.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
91.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
79.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
78.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
76.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
72.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
70.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
58.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
53.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
52.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
51.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
49.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
49.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
48.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
45.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
41.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
40.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
39.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
38.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
38.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
37.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
37.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
36.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
35.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
35.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
34.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
34.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
34.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
34.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
34.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
33.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
33.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
33.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
33.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
33.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
32.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
32.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
32.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
32.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
31.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
31.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
31.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
31.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
31.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
31.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
31.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
31.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
30.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
30.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
30.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
30.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
30.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
29.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
29.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
28.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
28.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
28.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
28.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
26.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
26.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
26.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
26.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
26.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
25.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
25.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
25.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
25.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
25.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
25.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
25.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
25.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
24.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
24.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
24.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
24.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
24.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
24.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
24.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
23.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
23.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
23.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
23.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
23.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
22.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
22.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
22.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
22.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
21.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
21.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
21.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
21.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
21.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
21.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
21.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
20.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
20.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
20.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
20.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
20.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
19.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
19.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
19.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
19.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
19.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
18.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
18.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
18.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
17.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
17.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
17.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
17.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
17.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
17.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
17.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
16.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
16.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
16.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
16.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
15.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
15.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
15.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
15.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
14.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
14.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
14.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
13.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
12.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
12.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
11.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
10.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
7.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
721
Tumor
1.2
533
Tumor
1.1
412
Normal
0.9
473
Tumor
0.8
415
Tumor
0.8
455
Tumor
0.8
356
Normal
0.8
713
Tumor
0.7
563
Tumor
0.6
722
Normal
0.6
328
Normal
0.6
686
Normal
0.5
443
Tumor
0.5
716
Normal
0.5
368
Normal
0.5
364
Normal
0.5
277
Tumor
0.5
661
Tumor
0.5
715
Tumor
0.5
571
Tumor
0.5
126
Normal
0.5
361
Tumor
0.5
416
Normal
0.5
557
Tumor
0.5
125
Tumor
0.4
918
Normal
0.4
446
Normal
0.4
376
Normal
0.4
671
Tumor
0.4
714
Normal
0.4
267
Tumor
0.4
964
Normal
0.4
271
Tumor
0.4
514
Normal
0.4
526
Normal
0.4
444
Normal
0.4
146
Normal
0.4
432
Normal
0.4
976
Normal
0.3
696
Normal
0.3
925
Tumor
0.3
665
Tumor
0.3
231
Tumor
0.3
313
Tumor
0.3
365
Tumor
0.3
383
Tumor
0.3
433
Tumor
0.3
268
Normal
0.3
138
Normal
0.3
981
Tumor
0.3
573
Tumor
0.3
331
Tumor
0.3
537
Tumor
0.3
468
Normal
0.3
477
Tumor
0.3
384
Normal
0.3
435
Tumor
0.3
912
Normal
0.3
127
Tumor
0.3
413
Tumor
0.2
367
Tumor
0.2
672
Normal
0.2
366
Normal
0.2
917
Tumor
0.2
647
Tumor
0.2
527
Tumor
0.2
1016
Normal
0.2
362
Normal
0.2
884
Normal
0.2
528
Normal
0.2
978
Normal
0.2
327
Tumor
0.2
921
Tumor
0.2
258
Normal
0.2
685
Tumor
0.2
436
Normal
0.2
513
Tumor
0.2
534
Normal
0.2
124
Normal
0.2
332
Normal
0.1
882
Normal
0.1
915
Tumor
0.1
488
Normal
0.1
484
Normal
0.1
297
Tumor
0.1
471
Tumor
0.1
663
Tumor
0.1
924
Normal
0.1
922
Normal
0.1
914
Normal
0.1
312
Normal
0.1
232
Normal
0.1
445
Tumor
0.1
1014
Normal
0.1
553
Tumor
0.1
518
Normal
0.1
984
Normal
0.1
926
Normal
0.1
142
Normal
0.1
498
Normal
0.1
516
Normal
0.1
131
Tumor
0.1
881
Tumor
0.1
494
Normal
0.1
463
Tumor
0.1
137
Tumor
0.0
311
Tumor
0.0
958
Normal
0.0
451
Tumor
0.0
666
Normal
0.0
141
Tumor
0.0
982
Normal
0.0
426
Normal
0.0
567
Tumor
0.0
145
Tumor
0.0
662
Normal
0.0
434
Normal
0.0
913
Tumor
0.0
461
Tumor
0.0
464
Normal
0.0
568
Normal
0.0
474
Normal
0.0
114
Normal
0.0
517
Tumor
0.0
524
Normal
0.0
228
Normal
0.0
546
Normal
0.0
467
Tumor
0.0
423
Tumor
0.0
375
Tumor
0.0
257
Tumor
0.0
262
Normal
0.0
695
Tumor
0.0
428
Normal
0.0
977
Tumor
0.0
911
Tumor
0.0
877
Tumor
0.0
923
Tumor
0.0
883
Tumor
0.0
572
Normal
0.0
272
Normal
0.0
414
Normal
0.0
664
Normal
0.0
286
Normal
-0.1
968
Normal
-0.1
487
Tumor
-0.1
965
Tumor
-0.1
1013
Tumor
-0.1
212
Normal
-0.1
466
Normal
-0.1
472
Normal
-0.1
132
Normal
-0.1
648
Normal
-0.1
424
Normal
-0.1
525
Tumor
-0.1
967
Tumor
-0.1
975
Tumor
-0.1
112
Tumor
-0.1
111
Normal
-0.1
558
Normal
-0.1
462
Normal
-0.1
261
Tumor
-0.1
574
Normal
-0.1
554
Normal
-0.1
135
Tumor
-0.1
916
Normal
-0.1
465
Tumor
-0.1
1015
Tumor
-0.1
278
Normal
-0.1
421
Tumor
-0.1
431
Tumor
-0.1
456
Normal
-0.1
545
Tumor
-0.2
427
Tumor
-0.2
538
Normal
-0.2
493
Tumor
-0.2
878
Normal
-0.2
515
Tumor
-0.2
425
Tumor
-0.2
113
Tumor
-0.2
136
Normal
-0.2
483
Tumor
-0.2
966
Normal
-0.2
497
Tumor
-0.2
128
Normal
-0.3
452
Normal
-0.3
492
Normal
-0.3
957
Tumor
-0.3
355
Tumor
-0.3
482
Normal
-0.3
314
Normal
-0.3
422
Normal
-0.3
284
Normal
-0.3
983
Tumor
-0.3
478
Normal
-0.3
963
Tumor
-0.3
564
Normal
-0.3
491
Tumor
-0.3
227
Tumor
-0.3
298
Normal
-0.4
123
Tumor
-0.4
523
Tumor
-0.4
363
Tumor
-0.4
224
Normal
-0.4
411
Tumor
-0.5
481
Tumor
-0.6
211
Tumor
-0.9
283
Tumor
-1.0
223
Tumor
-1.1
285
Tumor
-1.2
351
Tumor
N/A
352
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
741
Tumor
N/A
862
Normal
N/A
742
Normal
N/A
863
Tumor
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
785
Tumor
N/A
786
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
