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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
227.3
nTPM
GTEx:
227.3
nTPM
FANTOM5:
102.4
Scaled Tags Per Million
Mouse:
2309.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
227.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 227.3
Samples: 105
Max nTPM: 567.3
Min nTPM: 8.9
Std nTPM: 130.7
Median nTPM:
218_1
71 years, female
567.3
163_1
78 years, male
484.0
319_1
81 years, male
478.4
356_1
87 years, female
474.5
354_1
81 years, female
470.8
353_1
82 years, female
464.3
452_1
88 years, female
458.1
352_1
62 years, male
445.3
351_1
91 years, male
438.9
321_1
62 years, female
432.4
377_1
82 years, female
410.0
320_1
89 years, female
402.8
349_1
83 years, male
397.5
355_1
70 years, female
397.5
350_1
84 years, female
396.6
177_1
74 years, male
386.2
506_1
65 years, male
374.6
386_1
76 years, male
365.5
243_1
75 years, male
365.3
376_1
75 years, female
362.3
295_1
61 years, female
347.9
394_1
75 years, female
347.9
172_1
72 years, female
346.4
322_1
76 years, male
335.3
379_1
60 years, male
324.1
293_1
68 years, female
316.6
406_1
79 years, male
305.3
318_1
68 years, male
304.9
292_1
71 years, male
297.8
99_1
64 years, male
295.2
335_1
73 years, female
294.1
447_1
81 years, male
294.1
384_1
83 years, male
292.0
317_1
60 years, male
290.2
503_1
68 years, male
285.6
173_1
67 years, male
280.2
286_1
68 years, female
278.2
6_1
73 years, female
270.1
404_1
82 years, female
266.2
251_1
78 years, male
264.0
237_1
82 years, male
257.3
425_1
59 years, female
255.7
4_1
88 years, female
250.6
189_1
76 years, male
248.6
2_1
77 years, female
247.4
264_1
73 years, female
245.7
389_1
86 years, female
244.3
517_1
88 years, male
231.8
316_1
62 years, male
229.7
291_1
76 years, male
228.4
348_1
84 years, male
224.1
480_1
63 years, male
221.5
405_1
91 years, male
218.7
375_1
74 years, female
215.6
115_1
83 years, male
210.2
347_1
72 years, male
200.0
137_1
83 years, male
196.6
145_1
84 years, male
196.0
396_1
62 years, male
193.3
526_1
61 years, male
188.0
17_1
71 years, male
186.5
229_1
69 years, female
184.9
246_1
77 years, male
184.9
153_1
70 years, female
183.3
35_1
74 years, female
181.6
41_1
94 years, female
176.8
120_1
70 years, female
167.1
265_1
87 years, male
163.9
468_1
89 years, male
163.0
9_1
66 years, female
162.8
254_1
77 years, female
162.0
18_1
88 years, male
160.8
266_1
85 years, male
149.1
311_1
78 years, male
145.9
314_1
67 years, male
143.6
217_1
76 years, male
141.3
126_1
63 years, male
135.5
518_1
75 years, female
132.3
109_1
81 years, female
131.4
42_1
85 years, male
127.0
288_1
66 years, female
125.8
313_1
79 years, female
98.6
307_1
66 years, female
97.8
324_1
76 years, male
96.6
117_1
61 years, male
87.8
139_1
64 years, female
87.5
162_1
79 years, female
83.5
315_1
62 years, female
82.4
119_1
70 years, female
82.2
81_1
67 years, male
82.1
499_1
55 years, female
82.1
142_1
61 years, female
74.1
308_1
70 years, female
71.5
32_1
67 years, male
57.4
43_1
64 years, female
53.1
495_1
57 years, female
50.0
89_1
63 years, male
49.9
415_1
77 years, female
48.5
414_1
84 years, female
37.0
501_1
88 years, male
35.8
466_1
57 years, female
34.9
149_1
88 years, male
20.7
413_1
59 years, female
17.8
490_1
67 years, female
9.4
491_1
89 years, female
8.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.