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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EIF2B4 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
67.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
65.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
47.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
45.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
44.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
40.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
40.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
40.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
39.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
39.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
38.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
37.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
37.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
37.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
37.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
36.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
35.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
35.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
34.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
34.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
33.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
33.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
32.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
32.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
32.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
32.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
31.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
30.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
30.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
29.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
29.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
29.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
29.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
29.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
29.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
28.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
28.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
28.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
28.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
28.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
27.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
27.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
27.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
27.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
27.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
27.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
27.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
27.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
26.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
26.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
26.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
26.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
26.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
25.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
25.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
25.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
25.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
25.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
24.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
24.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
24.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
24.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
24.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
24.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
24.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
24.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
24.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
24.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
23.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
23.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
23.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
23.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
23.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
23.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
23.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
23.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
23.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
23.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
23.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
23.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
23.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
23.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
22.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
22.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
22.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
22.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
22.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
22.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
22.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
22.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
22.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
22.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
22.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
22.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
22.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
21.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
21.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
21.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
21.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
21.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
21.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
21.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
21.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
21.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
21.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
21.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
21.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
21.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
21.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
21.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
21.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
20.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
20.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
20.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
20.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
20.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
20.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
20.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
20.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
20.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
20.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
19.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
19.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
19.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
19.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
19.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
19.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
19.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
19.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
19.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
19.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
19.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
18.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
18.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
18.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
18.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
18.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
18.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
18.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
17.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
17.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
17.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
17.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
17.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
17.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
17.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
17.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
17.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
17.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
16.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
16.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
16.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
16.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
16.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
16.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
16.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
16.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
15.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
15.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
15.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
15.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
15.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
15.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
15.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
15.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
15.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
14.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
14.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
14.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
14.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
14.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
14.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
13.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
13.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
13.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
13.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
13.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
12.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
12.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
12.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
12.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
12.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
11.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
9.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
8.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
6.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EIF2B4 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.9
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
76.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
66.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
58.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
54.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
53.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
53.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
46.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
46.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
41.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
41.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
41.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
41.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
40.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
40.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
40.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
39.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
39.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
39.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
38.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
37.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
37.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
37.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
36.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
36.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
36.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
36.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
35.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
35.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
35.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
35.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
33.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
33.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
33.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
33.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
32.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
32.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
31.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
31.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
31.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
31.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
31.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
30.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
30.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
30.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
30.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
30.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
30.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
29.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
29.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
29.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
29.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
29.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
28.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
28.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
28.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
28.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
28.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
28.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
28.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
27.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
27.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
27.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
27.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
27.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
27.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
27.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
26.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
26.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
26.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
26.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
26.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
25.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
25.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
25.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
25.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
25.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
25.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
25.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
25.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
25.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
25.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
25.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
24.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
24.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
24.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
24.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
24.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
24.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
24.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
24.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
24.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
24.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
24.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
24.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
23.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
23.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
23.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
23.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
23.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
23.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
23.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
22.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
22.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
22.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
22.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
22.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
22.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
22.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
22.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
21.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
21.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
21.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
21.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
21.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
21.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
21.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
21.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
21.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
20.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
20.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
20.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
20.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
19.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
19.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
19.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
19.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
19.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
19.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
19.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
19.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
19.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
19.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
19.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
19.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
18.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
18.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
18.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
17.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
17.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
17.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
17.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
16.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
16.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
16.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
16.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
15.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
15.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
15.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
14.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
14.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
14.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
14.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
14.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
13.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
12.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
12.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
11.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
9.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
0.6
1027
Tumor
0.6
557
Tumor
0.6
231
Tumor
0.5
537
Tumor
0.5
527
Tumor
0.5
137
Tumor
0.4
627
Tumor
0.4
1021
Tumor
0.4
393
Tumor
0.4
327
Tumor
0.4
755
Tumor
0.4
513
Tumor
0.4
525
Tumor
0.4
741
Tumor
0.3
391
Tumor
0.3
368
Normal
0.3
777
Tumor
0.3
953
Tumor
0.3
452
Normal
0.3
313
Tumor
0.3
851
Tumor
0.3
171
Tumor
0.3
1041
Tumor
0.3
533
Tumor
0.3
395
Tumor
0.3
451
Tumor
0.3
463
Tumor
0.3
714
Normal
0.3
515
Tumor
0.3
865
Tumor
0.3
617
Tumor
0.3
361
Tumor
0.3
383
Tumor
0.3
365
Tumor
0.3
867
Tumor
0.3
925
Tumor
0.3
745
Tumor
0.2
978
Normal
0.2
353
Tumor
0.2
257
Tumor
0.2
864
Normal
0.2
367
Tumor
0.2
261
Tumor
0.2
554
Normal
0.2
376
Normal
0.2
112
Tumor
0.2
648
Normal
0.2
351
Tumor
0.2
558
Normal
0.2
572
Normal
0.2
477
Tumor
0.2
915
Tumor
0.2
362
Normal
0.2
918
Normal
0.2
218
Normal
0.2
427
Tumor
0.2
564
Normal
0.2
523
Tumor
0.2
467
Tumor
0.2
944
Normal
0.2
214
Normal
0.2
483
Tumor
0.2
514
Normal
0.2
955
Tumor
0.2
232
Normal
0.2
425
Tumor
0.2
132
Normal
0.2
1013
Tumor
0.2
528
Normal
0.2
445
Tumor
0.2
861
Tumor
0.2
474
Normal
0.2
366
Normal
0.2
375
Tumor
0.2
222
Normal
0.2
465
Tumor
0.2
357
Tumor
0.2
494
Normal
0.2
1045
Tumor
0.2
423
Tumor
0.2
567
Tumor
0.2
866
Normal
0.2
278
Normal
0.2
267
Tumor
0.2
873
Tumor
0.1
981
Tumor
0.1
1022
Normal
0.1
976
Normal
0.1
746
Normal
0.1
535
Tumor
0.1
466
Normal
0.1
716
Normal
0.1
661
Tumor
0.1
862
Normal
0.1
413
Tumor
0.1
484
Normal
0.1
965
Tumor
0.1
195
Tumor
0.1
191
Tumor
0.1
926
Normal
0.1
728
Normal
0.1
823
Tumor
0.1
1042
Normal
0.1
213
Tumor
0.1
628
Normal
0.1
663
Tumor
0.1
1028
Normal
0.1
461
Tumor
0.1
1014
Normal
0.1
937
Tumor
0.1
912
Normal
0.1
568
Normal
0.1
883
Tumor
0.1
136
Normal
0.1
141
Tumor
0.1
982
Normal
0.1
384
Normal
0.1
443
Tumor
0.1
616
Normal
0.1
984
Normal
0.1
518
Normal
0.1
922
Normal
0.1
943
Tumor
0.1
534
Normal
0.1
923
Tumor
0.1
722
Normal
0.1
956
Normal
0.1
686
Normal
0.1
387
Tumor
0.1
618
Normal
0.1
272
Normal
0.1
196
Normal
0.1
145
Tumor
0.1
964
Normal
0.1
715
Tumor
0.1
446
Normal
0.1
298
Normal
0.1
538
Normal
0.1
665
Tumor
0.1
916
Normal
0.1
952
Normal
0.1
1032
Normal
0.1
723
Tumor
0.1
662
Normal
0.1
815
Tumor
0.1
1046
Normal
0.1
416
Normal
0.1
642
Normal
0.1
431
Tumor
0.1
312
Normal
0.1
721
Tumor
0.1
615
Tumor
0.1
1016
Normal
0.1
138
Normal
0.1
727
Tumor
0.1
516
Normal
0.1
545
Tumor
0.1
262
Normal
0.1
695
Tumor
0.1
958
Normal
0.1
1026
Normal
0.1
464
Normal
0.1
493
Tumor
0.1
852
Normal
0.1
666
Normal
0.1
481
Tumor
0.1
113
Tumor
0.1
966
Normal
0.1
816
Normal
0.1
938
Normal
0.1
258
Normal
0.1
882
Normal
0.1
356
Normal
0.1
742
Normal
0.1
448
Normal
0.1
738
Normal
0.1
228
Normal
0.1
574
Normal
0.1
884
Normal
0.1
468
Normal
0.1
283
Tumor
0.1
924
Normal
0.1
161
Tumor
0.0
911
Tumor
0.0
187
Tumor
0.0
412
Normal
0.0
546
Normal
0.0
434
Normal
0.0
142
Normal
0.0
436
Normal
0.0
786
Normal
0.0
314
Normal
0.0
951
Tumor
0.0
456
Normal
0.0
874
Normal
0.0
737
Tumor
0.0
1044
Normal
0.0
217
Tumor
0.0
526
Normal
0.0
967
Tumor
0.0
878
Normal
0.0
977
Tumor
0.0
858
Normal
0.0
358
Normal
0.0
286
Normal
0.0
957
Tumor
0.0
472
Normal
0.0
868
Normal
0.0
462
Normal
0.0
421
Tumor
0.0
664
Normal
0.0
524
Normal
0.0
124
Normal
0.0
863
Tumor
0.0
284
Normal
0.0
968
Normal
0.0
696
Normal
0.0
392
Normal
0.0
1025
Tumor
0.0
341
Tumor
0.0
698
Normal
0.0
724
Normal
0.0
482
Normal
0.0
487
Tumor
0.0
857
Tumor
0.0
277
Tumor
0.0
125
Tumor
0.0
1043
Tumor
0.0
636
Normal
0.0
497
Tumor
0.0
785
Tumor
0.0
128
Normal
0.0
331
Tumor
0.0
954
Normal
0.0
185
Tumor
0.0
328
Normal
0.0
553
Tumor
0.0
492
Normal
0.0
223
Tumor
0.0
268
Normal
0.0
386
Normal
0.0
114
Normal
0.0
415
Tumor
0.0
983
Tumor
0.0
127
Tumor
0.0
426
Normal
0.0
573
Tumor
0.0
697
Tumor
0.0
778
Normal
0.0
491
Tumor
0.0
212
Normal
0.0
396
Normal
0.0
344
Normal
0.0
186
Normal
0.0
824
Normal
0.0
352
Normal
0.0
571
Tumor
0.0
435
Tumor
0.0
342
Normal
0.0
414
Normal
0.0
332
Normal
0.0
188
Normal
0.0
756
Normal
0.0
123
Tumor
0.0
488
Normal
0.0
172
Normal
-0.1
1015
Tumor
-0.1
354
Normal
-0.1
364
Normal
-0.1
146
Normal
-0.1
355
Tumor
-0.1
914
Normal
-0.1
818
Normal
-0.1
432
Normal
-0.1
647
Tumor
-0.1
672
Normal
-0.1
813
Tumor
-0.1
563
Tumor
-0.1
814
Normal
-0.1
913
Tumor
-0.1
211
Tumor
-0.1
424
Normal
-0.1
224
Normal
-0.1
394
Normal
-0.1
422
Normal
-0.1
135
Tumor
-0.1
473
Tumor
-0.1
343
Tumor
-0.1
162
Normal
-0.1
433
Tumor
-0.1
192
Normal
-0.1
111
Normal
-0.1
455
Tumor
-0.1
536
Normal
-0.1
148
Normal
-0.1
385
Tumor
-0.1
744
Normal
-0.1
498
Normal
-0.2
447
Tumor
-0.2
428
Normal
-0.2
411
Tumor
-0.2
126
Normal
-0.2
471
Tumor
-0.2
877
Tumor
-0.2
388
Normal
-0.2
517
Tumor
-0.2
311
Tumor
-0.2
921
Tumor
-0.2
271
Tumor
-0.2
444
Normal
-0.2
478
Normal
-0.3
221
Tumor
-0.3
147
Tumor
-0.3
917
Tumor
-0.3
297
Tumor
-0.3
363
Tumor
-0.3
1031
Tumor
-0.3
227
Tumor
-0.3
713
Tumor
-0.3
817
Tumor
-0.3
975
Tumor
-0.4
963
Tumor
-0.4
881
Tumor
-0.4
285
Tumor
-0.4
671
Tumor
-0.4
635
Tumor
-0.4
131
Tumor
-0.4
641
Tumor
-0.5
743
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
