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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
32.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
23.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
21.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
15.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
9.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
4.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F5 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
72.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
56.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
56.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
47.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
44.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
40.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
39.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
34.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
32.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
30.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
30.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
27.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
27.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
25.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
25.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
23.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
18.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
18.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
16.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
16.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
15.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
14.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
12.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
11.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
7.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F5 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
42.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
34.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
33.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
32.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
14.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
83.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
79.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
79.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
78.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
76.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
67.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
62.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
61.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
59.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
57.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
57.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
53.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
52.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
52.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
51.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
47.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
47.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
47.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
45.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
45.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
44.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
43.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
43.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
43.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
41.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
40.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
40.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
39.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
39.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
39.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
37.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
37.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
34.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
34.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
34.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
33.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
33.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
33.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
33.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
32.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
32.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
30.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
30.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
30.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
30.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
28.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
28.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
28.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
27.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
27.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
27.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
27.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
27.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
27.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
26.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
26.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
26.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
26.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
25.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
24.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
23.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
23.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
20.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
20.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
19.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
11.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092790003
Tumor
1.0
CPT0001500009
Tumor
0.8
CPT0088760003
Tumor
0.8
CPT0075560003
Tumor
0.7
CPT0065810003
Tumor
0.7
CPT0002370001
Normal
0.6
CPT0023690003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0077490003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0089460004
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0078930003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0086360003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0000890001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0078990003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0001340003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0020130001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0017850003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0079480003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0075570001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0065820001
Normal
-0.5
CPT0078510003
Tumor
-0.9
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0063320003
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
