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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NKTR is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
11.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
8.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
7.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
6.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
6.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
6.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
6.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
5.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
5.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
5.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
5.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
5.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
5.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
4.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
4.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
4.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
4.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
4.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
4.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
4.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
4.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
4.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
3.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
3.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
3.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
3.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
3.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
3.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
3.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
3.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
3.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
3.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
3.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
3.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
3.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
3.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
2.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
2.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
2.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
2.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
2.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
2.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
2.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
2.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
2.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
2.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
2.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
2.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
2.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NKTR is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
231
Samples
Sample
Description
TPM
DO50815
0 years, male, NA, stage:3, alive, 150 days
63.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
50.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
43.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
42.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
41.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
39.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
39.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
38.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
38.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
38.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
38.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
37.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
36.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
36.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
36.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
36.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
35.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
33.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
33.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
33.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
31.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
31.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
30.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
29.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
29.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
29.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
28.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
28.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
28.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
28.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
27.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
27.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
27.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
27.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
27.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
27.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
26.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
26.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
26.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
26.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
26.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
26.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
26.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
26.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
25.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
25.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
25.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
25.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
25.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
25.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
25.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
25.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
25.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
24.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
24.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
24.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
24.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
24.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
24.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
24.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
24.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
24.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
24.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
24.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
23.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
23.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
23.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
23.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
23.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
23.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
23.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
23.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
22.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
22.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
22.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
22.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
22.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
22.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
22.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
21.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
21.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
21.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
21.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
21.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
21.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
21.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
21.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
21.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
20.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
20.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
20.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
20.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
20.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
20.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
20.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
20.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
20.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
20.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
19.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
19.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
19.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
18.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
18.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
18.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
18.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
18.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
18.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
17.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
17.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
17.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
17.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
16.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
16.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
16.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
16.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
16.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
15.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
15.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
15.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
14.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
14.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
14.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
13.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
13.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
13.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
13.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
12.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
12.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
11.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
11.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
11.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
11.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
10.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
1.2
211
Tumor
1.0
951
Tumor
1.0
865
Tumor
0.9
137
Tumor
0.9
221
Tumor
0.9
277
Tumor
0.9
331
Tumor
0.8
967
Tumor
0.8
131
Tumor
0.8
217
Tumor
0.8
187
Tumor
0.7
128
Normal
0.7
111
Normal
0.6
285
Tumor
0.6
982
Normal
0.6
428
Normal
0.6
271
Tumor
0.6
975
Tumor
0.6
545
Tumor
0.6
426
Normal
0.6
113
Tumor
0.6
487
Tumor
0.6
817
Tumor
0.6
957
Tumor
0.6
963
Tumor
0.6
413
Tumor
0.6
231
Tumor
0.5
414
Normal
0.5
268
Normal
0.5
661
Tumor
0.5
313
Tumor
0.5
427
Tumor
0.5
147
Tumor
0.5
114
Normal
0.5
423
Tumor
0.5
424
Normal
0.5
395
Tumor
0.5
297
Tumor
0.5
567
Tumor
0.5
136
Normal
0.5
213
Tumor
0.4
663
Tumor
0.4
523
Tumor
0.4
743
Tumor
0.4
937
Tumor
0.4
814
Normal
0.4
477
Tumor
0.4
422
Normal
0.4
777
Tumor
0.4
191
Tumor
0.4
258
Normal
0.4
141
Tumor
0.4
695
Tumor
0.4
161
Tumor
0.4
873
Tumor
0.4
737
Tumor
0.4
391
Tumor
0.4
112
Tumor
0.4
1015
Tumor
0.4
483
Tumor
0.4
491
Tumor
0.4
1013
Tumor
0.4
431
Tumor
0.4
227
Tumor
0.3
385
Tumor
0.3
984
Normal
0.3
724
Normal
0.3
923
Tumor
0.3
493
Tumor
0.3
283
Tumor
0.3
411
Tumor
0.3
727
Tumor
0.3
497
Tumor
0.3
367
Tumor
0.3
366
Normal
0.3
138
Normal
0.3
498
Normal
0.3
467
Tumor
0.3
267
Tumor
0.3
977
Tumor
0.3
387
Tumor
0.3
362
Normal
0.3
126
Normal
0.3
343
Tumor
0.3
473
Tumor
0.3
124
Normal
0.3
368
Normal
0.3
983
Tumor
0.3
536
Normal
0.3
641
Tumor
0.3
447
Tumor
0.3
384
Normal
0.3
917
Tumor
0.3
527
Tumor
0.3
943
Tumor
0.2
135
Tumor
0.2
813
Tumor
0.2
823
Tumor
0.2
785
Tumor
0.2
535
Tumor
0.2
365
Tumor
0.2
553
Tumor
0.2
852
Normal
0.2
533
Tumor
0.2
537
Tumor
0.2
818
Normal
0.2
421
Tumor
0.2
1014
Normal
0.2
665
Tumor
0.2
1031
Tumor
0.2
355
Tumor
0.2
857
Tumor
0.2
357
Tumor
0.2
463
Tumor
0.2
647
Tumor
0.2
517
Tumor
0.2
563
Tumor
0.2
755
Tumor
0.2
492
Normal
0.2
127
Tumor
0.2
671
Tumor
0.2
172
Normal
0.2
257
Tumor
0.2
513
Tumor
0.2
921
Tumor
0.2
816
Normal
0.2
376
Normal
0.2
525
Tumor
0.2
455
Tumor
0.2
481
Tumor
0.2
685
Tumor
0.2
861
Tumor
0.2
146
Normal
0.1
262
Normal
0.1
1016
Normal
0.1
272
Normal
0.1
332
Normal
0.1
145
Tumor
0.1
218
Normal
0.1
981
Tumor
0.1
978
Normal
0.1
222
Normal
0.1
564
Normal
0.1
484
Normal
0.1
878
Normal
0.1
494
Normal
0.1
713
Tumor
0.1
433
Tumor
0.1
672
Normal
0.1
465
Tumor
0.1
916
Normal
0.1
425
Tumor
0.1
261
Tumor
0.1
311
Tumor
0.1
188
Normal
0.1
515
Tumor
0.1
877
Tumor
0.1
1032
Normal
0.1
524
Normal
0.1
478
Normal
0.1
195
Tumor
0.1
415
Tumor
0.1
741
Tumor
0.1
867
Tumor
0.1
573
Tumor
0.1
356
Normal
0.0
715
Tumor
0.0
341
Tumor
0.0
863
Tumor
0.0
966
Normal
0.0
953
Tumor
0.0
534
Normal
0.0
351
Tumor
0.0
416
Normal
0.0
914
Normal
0.0
745
Tumor
0.0
312
Normal
0.0
443
Tumor
0.0
756
Normal
0.0
488
Normal
0.0
1021
Tumor
0.0
386
Normal
0.0
526
Normal
0.0
697
Tumor
0.0
1026
Normal
0.0
1046
Normal
0.0
444
Normal
0.0
851
Tumor
0.0
938
Normal
0.0
1045
Tumor
0.0
824
Normal
0.0
918
Normal
0.0
528
Normal
0.0
1044
Normal
0.0
448
Normal
0.0
786
Normal
0.0
472
Normal
0.0
516
Normal
0.0
514
Normal
0.0
664
Normal
0.0
232
Normal
0.0
1028
Normal
0.0
744
Normal
0.0
815
Tumor
0.0
314
Normal
0.0
538
Normal
0.0
396
Normal
0.0
721
Tumor
0.0
778
Normal
0.0
142
Normal
0.0
471
Tumor
0.0
298
Normal
0.0
698
Normal
0.0
924
Normal
0.0
958
Normal
0.0
284
Normal
0.0
518
Normal
-0.1
361
Tumor
-0.1
388
Normal
-0.1
976
Normal
-0.1
451
Tumor
-0.1
1042
Normal
-0.1
224
Normal
-0.1
868
Normal
-0.1
192
Normal
-0.1
881
Tumor
-0.1
278
Normal
-0.1
858
Normal
-0.1
546
Normal
-0.1
383
Tumor
-0.1
212
Normal
-0.1
922
Normal
-0.1
571
Tumor
-0.1
375
Tumor
-0.1
132
Normal
-0.1
882
Normal
-0.1
1025
Tumor
-0.1
435
Tumor
-0.1
123
Tumor
-0.1
186
Normal
-0.1
925
Tumor
-0.1
866
Normal
-0.1
662
Normal
-0.1
572
Normal
-0.1
434
Normal
-0.1
968
Normal
-0.1
696
Normal
-0.1
1022
Normal
-0.1
874
Normal
-0.1
954
Normal
-0.2
574
Normal
-0.2
742
Normal
-0.2
223
Tumor
-0.2
864
Normal
-0.2
915
Tumor
-0.2
474
Normal
-0.2
394
Normal
-0.2
926
Normal
-0.2
666
Normal
-0.2
214
Normal
-0.2
412
Normal
-0.2
617
Tumor
-0.2
393
Tumor
-0.2
148
Normal
-0.2
557
Tumor
-0.2
686
Normal
-0.2
558
Normal
-0.2
125
Tumor
-0.2
363
Tumor
-0.2
883
Tumor
-0.2
327
Tumor
-0.2
328
Normal
-0.2
228
Normal
-0.2
445
Tumor
-0.2
627
Tumor
-0.2
955
Tumor
-0.2
635
Tumor
-0.3
568
Normal
-0.3
392
Normal
-0.3
364
Normal
-0.3
482
Normal
-0.3
352
Normal
-0.3
728
Normal
-0.3
714
Normal
-0.3
944
Normal
-0.3
554
Normal
-0.3
738
Normal
-0.3
171
Tumor
-0.3
358
Normal
-0.3
911
Tumor
-0.3
862
Normal
-0.3
964
Normal
-0.3
353
Tumor
-0.3
185
Tumor
-0.3
196
Normal
-0.3
956
Normal
-0.3
648
Normal
-0.4
723
Tumor
-0.4
716
Normal
-0.4
286
Normal
-0.4
461
Tumor
-0.4
446
Normal
-0.4
1027
Tumor
-0.4
615
Tumor
-0.4
464
Normal
-0.4
344
Normal
-0.4
746
Normal
-0.4
456
Normal
-0.4
462
Normal
-0.4
436
Normal
-0.4
628
Normal
-0.4
1043
Tumor
-0.4
432
Normal
-0.5
468
Normal
-0.5
342
Normal
-0.5
1041
Tumor
-0.5
636
Normal
-0.5
354
Normal
-0.5
722
Normal
-0.5
952
Normal
-0.5
913
Tumor
-0.5
452
Normal
-0.5
642
Normal
-0.6
616
Normal
-0.6
466
Normal
-0.6
618
Normal
-0.6
162
Normal
-0.7
884
Normal
-0.8
912
Normal
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
