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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HEMK1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
41.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
38.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
35.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
32.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
28.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
26.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
24.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
24.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
23.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
23.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
23.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
21.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
21.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
20.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
20.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
20.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
20.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
20.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
20.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
20.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
19.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
19.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
19.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
19.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
18.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
18.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
18.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
18.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
18.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
18.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
18.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
18.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
18.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
17.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
17.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
17.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
17.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
17.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
17.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
17.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
16.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
16.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
16.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
16.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
16.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
16.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
16.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
16.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
16.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
16.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
15.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
15.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
15.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
15.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
15.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
15.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
15.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
14.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
14.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
14.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
14.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
14.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
14.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
14.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
14.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
14.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
13.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
13.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
13.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
13.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
13.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
13.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
12.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
12.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
12.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
12.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
11.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
10.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
10.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
10.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
8.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
8.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
8.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
8.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
7.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
7.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
6.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HEMK1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.4
Number of samples
231
Samples
Sample
Description
TPM
DO50791
0 years, female, NA, stage:1, dead, 480 days
14.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
13.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
13.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
9.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
8.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
7.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
6.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
6.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
6.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
6.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
5.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
5.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
5.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
4.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
4.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
4.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
4.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
4.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
4.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
4.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
4.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
4.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
4.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
4.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
4.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
3.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
3.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
3.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
3.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
3.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
3.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
3.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
3.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
3.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
3.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
2.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
2.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
2.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
2.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
2.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
2.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
2.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
1.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
641
Tumor
1.7
446
Normal
1.6
436
Normal
1.4
435
Tumor
1.1
161
Tumor
1.1
433
Tumor
1.1
434
Normal
1.0
431
Tumor
1.0
445
Tumor
1.0
443
Tumor
0.9
925
Tumor
0.9
685
Tumor
0.8
314
Normal
0.8
635
Tumor
0.8
332
Normal
0.8
415
Tumor
0.7
615
Tumor
0.7
172
Normal
0.6
186
Normal
0.6
171
Tumor
0.6
722
Normal
0.6
148
Normal
0.6
627
Tumor
0.6
162
Normal
0.5
278
Normal
0.5
363
Tumor
0.5
695
Tumor
0.5
298
Normal
0.5
714
Normal
0.5
686
Normal
0.5
228
Normal
0.5
132
Normal
0.5
286
Normal
0.4
696
Normal
0.4
432
Normal
0.4
721
Tumor
0.4
366
Normal
0.4
224
Normal
0.4
367
Tumor
0.4
212
Normal
0.3
284
Normal
0.3
361
Tumor
0.3
312
Normal
0.3
642
Normal
0.3
715
Tumor
0.3
142
Normal
0.3
136
Normal
0.3
185
Tumor
0.3
355
Tumor
0.3
188
Normal
0.3
716
Normal
0.3
873
Tumor
0.3
227
Tumor
0.2
375
Tumor
0.2
368
Normal
0.2
823
Tumor
0.2
817
Tumor
0.2
921
Tumor
0.2
636
Normal
0.2
145
Tumor
0.2
857
Tumor
0.2
331
Tumor
0.2
818
Normal
0.2
146
Normal
0.2
147
Tumor
0.2
713
Tumor
0.1
327
Tumor
0.1
412
Normal
0.1
416
Normal
0.1
364
Normal
0.1
138
Normal
0.1
277
Tumor
0.0
922
Normal
0.0
917
Tumor
0.0
915
Tumor
0.0
383
Tumor
0.0
617
Tumor
0.0
362
Normal
0.0
376
Normal
0.0
618
Normal
0.0
616
Normal
0.0
384
Normal
0.0
137
Tumor
0.0
297
Tumor
0.0
858
Normal
0.0
852
Normal
0.0
815
Tumor
0.0
313
Tumor
0.0
926
Normal
0.0
356
Normal
0.0
924
Normal
0.0
365
Tumor
-0.1
628
Normal
-0.1
187
Tumor
-0.1
328
Normal
-0.1
816
Normal
-0.1
411
Tumor
-0.1
211
Tumor
-0.1
135
Tumor
-0.1
916
Normal
-0.1
956
Normal
-0.1
865
Tumor
-0.2
141
Tumor
-0.2
944
Normal
-0.2
223
Tumor
-0.2
918
Normal
-0.2
851
Tumor
-0.2
953
Tumor
-0.2
867
Tumor
-0.2
311
Tumor
-0.4
923
Tumor
-0.4
938
Normal
-0.5
283
Tumor
-0.5
952
Normal
-0.5
868
Normal
-0.5
824
Normal
-0.5
866
Normal
-0.5
954
Normal
-0.5
955
Tumor
-0.6
131
Tumor
-0.6
862
Normal
-0.6
864
Normal
-0.6
874
Normal
-0.7
285
Tumor
-0.8
863
Tumor
-0.8
861
Tumor
-0.8
937
Tumor
-0.9
951
Tumor
-1.0
943
Tumor
-1.1
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
114
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
268
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
957
Tumor
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
963
Tumor
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
978
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
983
Tumor
N/A
742
Normal
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
1045
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
553
Tumor
N/A
554
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
448
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
452
Normal
N/A
573
Tumor
N/A
574
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
344
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
