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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UPK1B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
198.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
99.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
85.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
61.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
50.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
49.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
44.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
40.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
34.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
29.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
28.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
19.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
17.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
12.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
8.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
8.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
8.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
7.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
6.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
5.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
5.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
5.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
5.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
5.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
4.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
4.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
4.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
4.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
4.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
4.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
3.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
3.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
3.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
3.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
3.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
3.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
3.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
3.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
2.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
2.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
2.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
2.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
2.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
2.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
2.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
2.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
2.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
2.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
2.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
2.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
2.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
2.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
2.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
2.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
2.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
2.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
1.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
1.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
1.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
1.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
1.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
1.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
1.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
1.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
1.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
1.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
1.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
1.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
1.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
1.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
1.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
1.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
1.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
1.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
1.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
1.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
1.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
1.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
1.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
0.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
0.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
0.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
0.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
0.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
0.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
0.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
0.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
0.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
0.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
0.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
0.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
0.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
0.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
0.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
0.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
0.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
0.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
0.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
0.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
0.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
0.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
0.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
0.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
0.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
0.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
0.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
0.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
0.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
0.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
0.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
0.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
0.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
0.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
0.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
0.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
0.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
0.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
0.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
0.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
0.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
0.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
0.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
0.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
0.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
0.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
0.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
0.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
0.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
0.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
0.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
0.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
0.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
0.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
0.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
0.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
0.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
0.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
0.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
0.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
0.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
0.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
0.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
0.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
0.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
0.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
0.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
0.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
0.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
0.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
0.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
0.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
0.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
0.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
0.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
0.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
0.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
0.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
0.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
0.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
0.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
0.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
0.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
0.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
0.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
0.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
0.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
0.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
0.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
0.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
0.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
0.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
0.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
0.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
0.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
0.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
0.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
0.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
0.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
0.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
0.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
0.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
0.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
0.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
0.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
0.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
0.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
0.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
0.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
0.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
0.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
0.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
0.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
0.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
0.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
0.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
0.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
0.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
0.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
0.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
0.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
0.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
0.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
0.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
0.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
0.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
0.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
0.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
0.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
0.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
0.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
0.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
0.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
0.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
0.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
0.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
0.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
0.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
0.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
0.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
0.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
0.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
0.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
0.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
0.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
0.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
0.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
0.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
0.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
0.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
0.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
0.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
0.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
0.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
0.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
0.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
0.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
0.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
0.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
0.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
0.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
0.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
0.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
0.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
0.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
0.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
0.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
0.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
0.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
0.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
0.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
0.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
0.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
0.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
0.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
0.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
0.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
0.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
0.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
0.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
0.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
0.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
0.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
0.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
0.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
0.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
0.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
0.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
0.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
0.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
0.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
0.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
0.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
0.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
0.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
0.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
0.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
0.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
0.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
0.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
0.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
0.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
0.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
0.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
0.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
0.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
0.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
0.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
0.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
0.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
0.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
0.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
0.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
0.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
0.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
0.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
0.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
0.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
0.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
0.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
0.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
0.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
0.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
0.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
0.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
0.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
0.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
0.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
0.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
0.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
0.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
0.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
0.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
0.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
0.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
0.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
0.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
0.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
0.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
0.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
0.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
0.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
0.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
0.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
0.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
0.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
0.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
0.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
0.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
0.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
0.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
0.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
0.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
0.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
0.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
0.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
0.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
0.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
0.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
0.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UPK1B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
124.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
90.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
38.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
8.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
4.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
4.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
4.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
3.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
2.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
2.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
2.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
2.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
2.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
1.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
1.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
0.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
0.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
0.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
0.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
0.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
0.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
0.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
0.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
0.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
0.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
0.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
0.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
0.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
0.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
0.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
0.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
0.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
0.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
0.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
0.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
0.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
0.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
0.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
0.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
0.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
0.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
0.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
0.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
0.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
0.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
0.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
0.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
0.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
0.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
0.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
0.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
0.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
0.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
0.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
0.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
0.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
0.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
0.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
0.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
0.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
0.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
0.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
0.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
0.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
0.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
0.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
0.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
0.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
0.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
0.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
0.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
0.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
0.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UPK1B is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
398.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
297.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
227.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
215.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
208.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
189.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
132.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
122.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
122.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
120.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
112.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
106.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
104.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
101.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
100.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
100.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
95.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
92.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
89.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
86.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
86.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
80.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
79.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
79.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
77.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
73.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
70.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
70.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
70.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
65.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
65.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
62.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
61.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
60.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
59.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
59.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
59.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
59.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
57.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
54.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
52.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
52.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
51.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
50.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
50.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
49.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
49.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
48.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
48.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
48.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
48.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
47.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
44.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
43.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
42.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
42.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
41.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
38.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
37.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
34.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
34.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
33.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
33.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
30.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
29.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
29.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
26.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
25.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
24.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
23.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
23.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
22.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
20.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
6.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
6.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
6.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
5.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
4.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
4.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
3.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
3.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
3.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
3.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
2.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
1.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
0.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
0.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
0.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
0.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
0.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
0.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
0.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
0.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
0.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
0.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012280003
Tumor
2.4
CPT0000640003
Tumor
0.9
CPT0078930003
Tumor
0.8
CPT0063630003
Tumor
0.7
CPT0023690003
Tumor
0.7
CPT0006900003
Tumor
0.6
CPT0075560003
Tumor
0.4
CPT0088780001
Normal
0.4
CPT0089460004
Tumor
0.4
CPT0092800003
Normal
0.3
CPT0086370003
Normal
0.2
CPT0088710001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0077490003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0010110003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0012640003
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0000660001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0012180003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0086360003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0065810003
Tumor
-0.5
CPT0002350011
Tumor
-0.6
CPT0088630003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0075570001
Normal
-1.8
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0007320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
