HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:45.4 nTPM
HPA Brain:37.6 nTPM
GTEx:45.4 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:80.3 nTPM
Mouse:51.1 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
1898 Male, age 80, left hemisphere 34.6
2621 Female, age 67, right hemisphere 27.9
1855 Male, age 76, left hemisphere 27.8
1911 Female, age 85, right hemisphere 25.3
2529 Female, age 94, left hemisphere 22.8
2148 Female, age 91, left hemisphere 22.0
Dentate gyrus
nTPM: 26.8
2010 Male, age 76, both hemispheres 32.2
2530 Female, age 94, left hemisphere 30.4
1927 Female, age 91, both hemispheres 27.4
2246 Female, age 85, both hemispheres 25.9
2531 Female, age 67, both hemispheres 23.5
2528 Male, age 74, both hemispheres 21.5
Entorhinal gyrus
nTPM: 30.0
1938 Female, age 85, left hemisphere 33.5
1787 Male, age 76, left hemisphere 32.7
2764 Male, age 80, right hemisphere 30.4
2613 Female, age 94, left hemisphere 29.2
2117 Female, age 91, right hemisphere 29.0
2686 Male, age 75, right hemisphere 25.1
Hippocampus, CA1
nTPM: 29.8
2749 Male, age 80, left hemisphere 34.6
2045 Male, age 76, both hemispheres 33.3
1873 Female, age 85, both hemispheres 28.9
2082 Female, age 91, right hemisphere 27.9
2527 Male, age 74, both hemispheres 24.4
Hippocampus, CA2
nTPM: 29.4
2249 Male, age 74, both hemispheres 33.4
1940 Female, age 85, left hemisphere 33.3
1892 Male, age 76, both hemispheres 32.2
1963 Male, age 80, left hemisphere 26.8
2113 Female, age 91, right hemisphere 26.5
2437 Female, age 94, left hemisphere 24.3
Hippocampus, CA3
nTPM: 26.4
2436 Male, age 74, both hemispheres 33.1
2137 Male, age 80, left hemisphere 30.0
1867 Male, age 76, both hemispheres 29.7
1891 Female, age 85, both hemispheres 25.0
2861 Female, age 67, both hemispheres 21.3
2620 Female, age 94, left hemisphere 19.3
Parahippocampal cortex
nTPM: 29.8
2250 Female, age 67, right hemisphere 36.3
1933 Female, age 85, both hemispheres 34.2
1850 Male, age 80, both hemispheres 33.3
2245 Female, age 91, both hemispheres 32.0
2018 Male, age 76, both hemispheres 31.8
1990 Female, age 91, right hemisphere 31.5
2532 Female, age 72, left hemisphere 31.4
2693 Female, age 94, both hemispheres 25.2
2622 Female, age 67, right hemisphere 21.9
2692 Male, age 74, both hemispheres 19.7
Perirhinal gyrus
nTPM: 37.6
1847 Female, age 91, left hemisphere 41.0
1841 Female, age 85, right hemisphere 39.1
2521 Female, age 94, right hemisphere 36.8
1794 Male, age 80, right hemisphere 36.6
2848 Male, age 76, right hemisphere 34.4
Subiculum
nTPM: 27.2
1977 Female, age 85, both hemispheres 33.5
2438 Female, age 94, left hemisphere 30.8
1901 Male, age 80, both hemispheres 26.8
2729 Female, age 91, right hemisphere 25.5
2042 Male, age 76, both hemispheres 25.1
2619 Male, age 74, both hemispheres 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.4
Samples: 197

Max nTPM: 95.2
Min nTPM: 23.1
Std nTPM: 9.3
Median nTPM: 44.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 95.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 71.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 65.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 62.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 61.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 61.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 61.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 60.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 60.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.7
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 49.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 80.3
Pig sample Sample description nTPM
Subiculum
nTPM: 79.0
Samples: 4

Max nTPM: 102.9
Min nTPM: 65.8
Sample A Female 102.9
Sample B Female 74.5
Sample C Male 72.7
Sample D Male 65.8
Dorsal hippocampus
nTPM: 80.4
Samples: 4

Max nTPM: 95.6
Min nTPM: 65.3
Sample A Female 95.6
Sample B Female 76.4
Sample C Male 84.1
Sample D Male 65.3
Entorhinal cortex
nTPM: 72.9
Samples: 4

Max nTPM: 78.6
Min nTPM: 62.2
Sample A Female 77.1
Sample B Female 78.6
Sample C Male 73.7
Sample D Male 62.2
Ventral hippocampus
nTPM: 78.0
Samples: 4

Max nTPM: 91.3
Min nTPM: 65.5
Sample A Female 72.6
Sample B Female 65.5
Sample C Male 91.3
Sample D Male 82.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 51.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.1
Samples: 4

Max nTPM: 50.1
Min nTPM: 39.9
Sample A Male 39.9
Sample B Male 40.6
Sample C Female 45.8
Sample D Female 50.1
Hippocampal formation
nTPM: 51.2
Samples: 4

Max nTPM: 56.4
Min nTPM: 49.2
Sample A Male 49.7
Sample B Male 49.2
Sample C Female 56.4
Sample D Female 49.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
68269502 Antisense, RP_041129_01_F11, Mouse strain C57BL/6J (56 days, male) 4.9

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