HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:10.9 nTPM
HPA Brain:9.8 nTPM
GTEx:10.9 nTPM
FANTOM5:26.7 Scaled Tags Per Million
Pig:42.2 nTPM
Mouse:29.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037777
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 8.6
1898 Male, age 80, left hemisphere 13.3
1855 Male, age 76, left hemisphere 9.6
1911 Female, age 85, right hemisphere 7.8
2529 Female, age 94, left hemisphere 7.4
2148 Female, age 91, left hemisphere 7.2
2621 Female, age 67, right hemisphere 6.4
Dentate gyrus
nTPM: 9.0
2010 Male, age 76, both hemispheres 10.4
1927 Female, age 91, both hemispheres 10.2
2530 Female, age 94, left hemisphere 10.2
2528 Male, age 74, both hemispheres 10.1
2246 Female, age 85, both hemispheres 7.6
2531 Female, age 67, both hemispheres 5.4
Entorhinal gyrus
nTPM: 8.3
1938 Female, age 85, left hemisphere 10.0
2613 Female, age 94, left hemisphere 9.3
2764 Male, age 80, right hemisphere 9.0
2117 Female, age 91, right hemisphere 8.7
1787 Male, age 76, left hemisphere 7.8
2686 Male, age 75, right hemisphere 5.2
Hippocampus, CA1
nTPM: 9.8
2749 Male, age 80, left hemisphere 15.9
1873 Female, age 85, both hemispheres 10.9
2045 Male, age 76, both hemispheres 7.7
2527 Male, age 74, both hemispheres 7.4
2082 Female, age 91, right hemisphere 7.1
Hippocampus, CA2
nTPM: 9.0
1892 Male, age 76, both hemispheres 13.3
1963 Male, age 80, left hemisphere 12.1
2249 Male, age 74, both hemispheres 9.4
1940 Female, age 85, left hemisphere 7.2
2113 Female, age 91, right hemisphere 7.1
2437 Female, age 94, left hemisphere 5.2
Hippocampus, CA3
nTPM: 9.0
2137 Male, age 80, left hemisphere 11.6
1867 Male, age 76, both hemispheres 10.9
1891 Female, age 85, both hemispheres 9.1
2620 Female, age 94, left hemisphere 8.7
2436 Male, age 74, both hemispheres 7.7
2861 Female, age 67, both hemispheres 6.1
Parahippocampal cortex
nTPM: 7.9
1850 Male, age 80, both hemispheres 11.7
1990 Female, age 91, right hemisphere 9.6
1933 Female, age 85, both hemispheres 9.2
2250 Female, age 67, right hemisphere 8.3
2018 Male, age 76, both hemispheres 8.0
2692 Male, age 74, both hemispheres 7.7
2245 Female, age 91, both hemispheres 6.7
2693 Female, age 94, both hemispheres 6.6
2622 Female, age 67, right hemisphere 5.6
2532 Female, age 72, left hemisphere 5.5
Perirhinal gyrus
nTPM: 9.7
1794 Male, age 80, right hemisphere 11.7
1847 Female, age 91, left hemisphere 10.6
1841 Female, age 85, right hemisphere 10.1
2521 Female, age 94, right hemisphere 9.0
2848 Male, age 76, right hemisphere 7.4
Subiculum
nTPM: 7.8
1901 Male, age 80, both hemispheres 9.8
1977 Female, age 85, both hemispheres 9.6
2729 Female, age 91, right hemisphere 7.9
2042 Male, age 76, both hemispheres 7.2
2619 Male, age 74, both hemispheres 6.7
2438 Female, age 94, left hemisphere 5.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.9
Samples: 197

Max nTPM: 23.8
Min nTPM: 5.6
Std nTPM: 2.4
Median nTPM: 10.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 21.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 17.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 15.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 15.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 15.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 14.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 14.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.7
FF:10169-103B7 60 years, female 32.1
FF:10153-102I9 76 years, female 21.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 42.2
Pig sample Sample description nTPM
Subiculum
nTPM: 34.8
Samples: 4

Max nTPM: 43.0
Min nTPM: 30.5
Sample A Female 43.0
Sample B Female 31.0
Sample C Male 30.5
Sample D Male 34.6
Dorsal hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 47.5
Min nTPM: 30.9
Sample A Female 47.5
Sample B Female 37.9
Sample C Male 39.5
Sample D Male 30.9
Entorhinal cortex
nTPM: 42.2
Samples: 4

Max nTPM: 49.9
Min nTPM: 38.1
Sample A Female 40.7
Sample B Female 49.9
Sample C Male 39.9
Sample D Male 38.1
Ventral hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 41.8
Min nTPM: 27.8
Sample A Female 41.8
Sample B Female 27.8
Sample C Male 29.8
Sample D Male 34.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 29.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 27.4
Sample A Male 27.6
Sample B Male 27.4
Sample C Female 31.6
Sample D Female 32.6
Hippocampal formation
nTPM: 29.1
Samples: 4

Max nTPM: 31.9
Min nTPM: 26.8
Sample A Male 31.9
Sample B Male 28.7
Sample C Female 26.8
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73423675 Antisense, RP_051019_02_B07, Mouse strain C57BL/6J (56 days, male) 0.1

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