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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
70.1
nTPM
HPA Brain:
34.4
nTPM
GTEx:
70.1
nTPM
FANTOM5:
88.7
Scaled Tags Per Million
Pig:
56.5
nTPM
Mouse:
47.9
nTPM
Allen mouse:
9.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.4
Sample id
Sample description
nTPM
Amygdala nTPM: 34.4
2814
Male, age 76, right hemisphere
43.0
2695
Female, age 67, right hemisphere
40.6
2514
Male, age 75, right hemisphere
33.4
2517
Female, age 94, left hemisphere
29.2
1987
Female, age 91, left hemisphere
26.0
Basal amygdala nTPM: 30.7
2609
Male, age 75, right hemisphere
34.6
2243
Female, age 91, right hemisphere
32.6
2110
Male, age 80, left hemisphere
31.2
1955
Male, age 76, both hemispheres
31.0
2685
Female, age 94, left hemisphere
29.1
2827
Female, age 67, right hemisphere
25.6
Central amygdala nTPM: 32.1
2239
Male, age 80, left hemisphere
38.3
1905
Male, age 76, both hemispheres
36.7
2826
Female, age 94, left hemisphere
30.5
2515
Male, age 75, right hemisphere
28.3
2701
Female, age 91, right hemisphere
26.7
Corticomedial amygdala nTPM: 28.9
2240
Male, age 76, both hemispheres
32.4
2829
Male, age 80, left hemisphere
32.0
2429
Female, age 94, left hemisphere
28.7
2242
Female, age 91, right hemisphere
28.4
2428
Male, age 75, right hemisphere
28.4
2535
Female, age 67, right hemisphere
23.3
Lateral amygdala nTPM: 31.4
1883
Male, age 76, both hemispheres
40.5
2516
Male, age 75, right hemisphere
35.0
2534
Female, age 94, left hemisphere
33.5
2830
Female, age 67, right hemisphere
29.7
2256
Male, age 80, left hemisphere
25.4
2255
Female, age 91, right hemisphere
24.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
70.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 70.1
Samples: 152
Max nTPM: 159.0
Min nTPM: 34.9
Std nTPM: 19.0
Median nTPM: 66.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
159.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
152.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
144.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
128.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
109.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
107.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
106.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
104.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
101.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
99.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
99.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
96.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
91.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
91.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
91.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
90.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
90.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
89.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
87.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
86.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
86.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
83.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
83.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
83.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
82.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
82.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
82.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
81.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
81.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
81.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
81.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
81.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
80.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
80.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
79.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
79.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
79.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
79.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
78.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
78.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
78.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
78.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
76.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
76.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
76.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
75.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
74.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
74.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
73.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
73.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
72.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
72.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
71.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
71.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
71.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
71.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
71.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
71.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
70.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
70.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
70.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
69.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
69.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
69.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
68.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
68.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
68.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
67.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
67.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
67.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
67.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
66.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
66.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
66.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
66.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
66.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
65.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
65.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
64.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
64.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
64.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
64.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
64.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
64.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
64.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
64.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
64.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
64.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
63.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
63.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
63.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
63.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
63.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
63.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
63.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
62.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
62.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
62.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
62.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
61.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
61.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
60.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
60.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
60.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
59.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
59.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
59.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
59.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
58.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
57.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
57.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
57.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
57.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
57.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
57.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
57.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
57.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
56.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
56.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
56.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
56.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
56.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
55.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
55.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
55.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
55.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
55.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
54.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
54.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
53.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
53.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
53.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
53.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
53.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
52.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
52.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
52.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
51.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
49.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
49.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
48.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
47.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
47.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
47.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
47.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
40.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
36.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
34.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 48.0
Samples: 4
Max nTPM: 49.3
Min nTPM: 46.1
Sample A
Male
48.9
Sample B
Male
49.3
Sample C
Female
47.5
Sample D
Female
46.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.