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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
503.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
380.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
258.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
244.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
219.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
208.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
206.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
204.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
196.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
193.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
191.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
191.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
190.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
189.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
188.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
173.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
167.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
166.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
165.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
161.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
157.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
154.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
154.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
153.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
150.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
150.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
150.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
149.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
143.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
143.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
141.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
141.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
139.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
137.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
136.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
135.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
131.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
129.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
127.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
126.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
125.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
122.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
121.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
118.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
118.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
118.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
118.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
117.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
114.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
114.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
113.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
113.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
113.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
112.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
110.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
110.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
110.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
108.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
107.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
107.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
107.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
107.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
105.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
104.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
102.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
101.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
100.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
99.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
99.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
99.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
98.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
98.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
97.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
96.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
96.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
96.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
95.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
93.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
93.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
92.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
90.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
89.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
89.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
89.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
89.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
88.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
88.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
87.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
84.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
83.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
83.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
82.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
82.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
82.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
82.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
82.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
81.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
80.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
80.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
80.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
79.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
79.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
78.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
77.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
77.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
77.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
77.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
76.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
76.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
76.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
76.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
75.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
75.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
75.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
74.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
74.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
74.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
74.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
73.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
73.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
72.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
72.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
71.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
70.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
70.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
70.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
69.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
68.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
68.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
68.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
67.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
66.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
65.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
65.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
64.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
64.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
63.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
63.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
62.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
62.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
61.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
61.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
60.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
60.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
59.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
59.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
59.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
58.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
58.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
57.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
57.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
57.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
57.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
56.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
55.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
55.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
54.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
54.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
54.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
54.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
54.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
53.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
52.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
52.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
52.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
48.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
47.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
47.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
47.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
46.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
46.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
45.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
45.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
45.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
44.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
44.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
44.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
44.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
44.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
44.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
43.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
43.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
43.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
42.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
42.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
42.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
42.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
42.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
42.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
41.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
41.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
41.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
41.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
40.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
40.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
39.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
39.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
39.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
38.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
38.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
38.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
37.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
37.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
37.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
36.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
36.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
35.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
35.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
34.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
34.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
33.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
33.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
33.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
33.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
32.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
31.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
29.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
29.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
27.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
27.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
24.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
24.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
23.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
21.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
20.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
18.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
6.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
5.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
5.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
4.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
4.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
3.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
3.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
3.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
3.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
3.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
3.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
3.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
3.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
2.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
2.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
2.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
1.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
1.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
0.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
0.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
0.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
0.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
0.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
81.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
254.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
244.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
230.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
199.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
197.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
184.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
179.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
176.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
172.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
168.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
164.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
160.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
156.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
155.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
155.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
153.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
153.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
148.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
138.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
135.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
134.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
130.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
130.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
128.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
120.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
114.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
110.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
110.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
104.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
103.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
103.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
100.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
96.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
93.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
92.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
92.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
91.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
91.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
91.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
89.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
89.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
89.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
88.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
87.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
86.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
85.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
83.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
74.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
74.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
70.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
69.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
69.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
67.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
60.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
57.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
56.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
52.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
52.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
51.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
47.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
44.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
43.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
40.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
35.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
6.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
5.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
5.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
4.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
3.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HAVCR1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
455.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
320.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
288.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
269.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
250.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
236.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
232.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
222.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
218.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
212.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
206.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
206.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
200.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
194.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
182.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
179.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
177.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
175.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
174.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
171.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
168.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
159.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
158.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
157.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
153.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
152.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
149.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
144.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
141.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
136.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
135.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
131.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
130.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
129.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
129.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
128.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
127.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
125.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
125.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
124.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
123.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
118.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
114.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
114.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
108.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
102.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
101.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
101.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
100.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
100.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
100.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
97.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
96.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
93.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
93.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
93.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
93.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
92.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
89.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
88.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
85.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
85.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
84.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
84.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
84.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
81.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
80.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
80.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
77.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
77.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
75.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
74.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
73.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
71.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
70.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
70.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
70.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
70.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
70.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
69.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
69.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
67.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
67.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
66.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
66.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
66.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
66.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
66.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
63.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
63.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
63.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
63.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
63.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
62.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
62.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
62.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
61.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
61.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
60.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
58.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
57.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
57.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
55.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
55.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
54.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
53.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
51.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
50.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
50.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
48.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
47.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
47.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
46.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
45.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
44.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
44.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
43.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
43.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
42.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
41.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
41.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
40.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
39.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
39.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
39.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
37.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
37.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
37.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
36.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
36.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
35.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
34.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
31.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
27.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
26.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
24.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
20.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
16.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
16.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
16.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
12.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
11.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
8.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086820003
Tumor
3.0
CPT0065430003
Tumor
2.4
CPT0015730003
Tumor
2.3
CPT0001540009
Tumor
2.2
CPT0077110003
Tumor
2.0
CPT0020120003
Tumor
2.0
CPT0012550003
Tumor
2.0
CPT0010110003
Tumor
2.0
CPT0065930003
Tumor
1.8
CPT0079410003
Tumor
1.8
CPT0023350003
Tumor
1.7
CPT0015810003
Tumor
1.7
CPT0084560003
Tumor
1.7
CPT0086360003
Tumor
1.7
CPT0007320003
Tumor
1.6
CPT0086950003
Tumor
1.5
CPT0086030003
Tumor
1.5
CPT0026410003
Tumor
1.4
CPT0021240003
Tumor
1.4
CPT0063630003
Tumor
1.4
CPT0024670003
Tumor
1.4
CPT0009060003
Tumor
1.4
CPT0025230003
Tumor
1.3
CPT0019130003
Tumor
1.3
CPT0017850003
Tumor
1.1
CPT0079380003
Tumor
1.1
CPT0025050003
Tumor
1.1
CPT0078510003
Tumor
1.1
CPT0092790003
Tumor
1.0
CPT0086870003
Tumor
1.0
CPT0088480003
Tumor
0.8
CPT0089020003
Tumor
0.8
CPT0001500009
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0012670003
Tumor
0.7
CPT0001220008
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0000780007
Tumor
0.6
CPT0075130003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0084590001
Normal
0.5
CPT0012370003
Tumor
0.5
CPT0065750003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0064370003
Tumor
0.3
CPT0015910003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0014370004
Tumor
0.2
CPT0065810003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0001190001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0081600003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0011240003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0088970003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0025110003
Tumor
-0.3
CPT0078990003
Tumor
-0.4
CPT0006530001
Normal
-0.4
CPT0019990003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0077320001
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0076330003
Tumor
-0.5
CPT0078800003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0089040001
Normal
-0.6
CPT0025350003
Tumor
-0.6
CPT0088500001
Normal
-0.6
CPT0077310003
Tumor
-0.6
CPT0065820001
Normal
-0.6
CPT0086830003
Normal
-0.6
CPT0017450001
Normal
-0.7
CPT0086370003
Normal
-0.7
CPT0001180009
Tumor
-0.7
CPT0065690003
Tumor
-0.7
CPT0075170001
Normal
-0.7
CPT0018250001
Normal
-0.7
CPT0087040003
Tumor
-0.7
CPT0007470001
Normal
-0.7
CPT0001510001
Normal
-0.7
CPT0085670003
Tumor
-0.7
CPT0069190001
Normal
-0.7
CPT0012180003
Tumor
-0.8
CPT0092800003
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0075720003
Tumor
-0.8
CPT0025170003
Tumor
-0.8
CPT0089460004
Tumor
-0.8
CPT0006900003
Tumor
-0.9
CPT0012090003
Normal
-0.9
CPT0012290003
Normal
-0.9
CPT0077490003
Tumor
-1.0
CPT0000640003
Tumor
-1.0
CPT0092190003
Normal
-1.0
CPT0010120001
Normal
-1.0
CPT0002350011
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0075560003
Tumor
-1.1
CPT0011410003
Tumor
-1.1
CPT0026420001
Normal
-1.2
CPT0063640001
Normal
-1.2
CPT0012570003
Normal
-1.3
CPT0013790003
Normal
-1.3
CPT0079430001
Normal
-1.3
CPT0088710001
Normal
-1.3
CPT0081990003
Tumor
-1.3
CPT0009080003
Normal
-1.3
CPT0012640003
Normal
-1.3
CPT0012900004
Tumor
-1.3
CPT0000870016
Tumor
-1.4
CPT0012770003
Normal
-1.4
CPT0006730001
Normal
-1.4
CPT0020130001
Normal
-1.4
CPT0025920001
Normal
-1.4
CPT0012920003
Normal
-1.4
CPT0063330001
Normal
-1.4
CPT0092310003
Normal
-1.5
CPT0088920001
Normal
-1.5
CPT0088690003
Tumor
-1.5
CPT0082010001
Normal
-1.5
CPT0024680001
Normal
-1.5
CPT0009020003
Normal
-1.5
CPT0025060001
Normal
-1.6
CPT0000890001
Normal
-1.6
CPT0014130001
Normal
-1.6
CPT0001350001
Normal
-1.7
CPT0088570001
Normal
-1.7
CPT0007860003
Tumor
-1.7
CPT0064400001
Normal
-1.7
CPT0010170001
Normal
-1.7
CPT0000660001
Normal
-1.8
CPT0087050003
Normal
-1.8
CPT0020020001
Normal
-1.8
CPT0025610001
Normal
-1.9
CPT0001550001
Normal
-1.9
CPT0086970003
Normal
-1.9
CPT0075570001
Normal
-1.9
CPT0014470001
Normal
-1.9
CPT0001230001
Normal
-2.0
CPT0079300001
Normal
-2.0
CPT0014350001
Normal
-2.0
CPT0081620001
Normal
-2.1
CPT0019160001
Normal
-2.1
CPT0078670001
Normal
-2.1
CPT0000790001
Normal
-2.1
CPT0023360001
Normal
-2.2
CPT0002270011
Tumor
-2.2
CPT0078840001
Normal
-2.2
CPT0092740003
Normal
-2.2
CPT0023710001
Normal
-2.2
CPT0086890003
Normal
-2.2
CPT0002370001
Normal
-2.3
CPT0006950001
Normal
-2.3
CPT0088780001
Normal
-2.3
CPT0088640003
Normal
-2.3
CPT0065450001
Normal
-2.4
CPT0077500001
Normal
-2.4
CPT0079180003
Tumor
-2.5
CPT0066430001
Normal
-2.5
CPT0089480003
Normal
-2.5
CPT0066480003
Tumor
-2.5
CPT0077140001
Normal
-2.5
CPT0001340003
Tumor
-2.6
CPT0079000001
Normal
-2.6
CPT0025290003
Tumor
-2.8
CPT0007870001
Normal
-2.8
CPT0078940001
Normal
-2.9
CPT0066520001
Normal
-3.1
CPT0078660003
Tumor
-3.8
CPT0088550004
Tumor
-3.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
