HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:75.4 nTPM
HPA Brain:51.2 nTPM
GTEx:75.4 nTPM
FANTOM5:107.7 Scaled Tags Per Million
Pig:49.4 nTPM
Mouse:73.2 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006499
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.2
Sample id Sample description nTPM
Hippocampus
nTPM: 46.7
1898 Male, age 80, left hemisphere 57.1
1855 Male, age 76, left hemisphere 48.7
2621 Female, age 67, right hemisphere 48.7
2148 Female, age 91, left hemisphere 45.7
2529 Female, age 94, left hemisphere 41.6
1911 Female, age 85, right hemisphere 38.7
Dentate gyrus
nTPM: 43.8
1927 Female, age 91, both hemispheres 49.3
2010 Male, age 76, both hemispheres 48.1
2528 Male, age 74, both hemispheres 44.8
2530 Female, age 94, left hemisphere 43.5
2246 Female, age 85, both hemispheres 43.1
2531 Female, age 67, both hemispheres 33.7
Entorhinal gyrus
nTPM: 42.4
2764 Male, age 80, right hemisphere 49.2
1938 Female, age 85, left hemisphere 44.0
2117 Female, age 91, right hemisphere 43.0
1787 Male, age 76, left hemisphere 42.9
2686 Male, age 75, right hemisphere 40.4
2613 Female, age 94, left hemisphere 35.1
Hippocampus, CA1
nTPM: 47.4
2749 Male, age 80, left hemisphere 65.9
2527 Male, age 74, both hemispheres 46.5
1873 Female, age 85, both hemispheres 43.8
2082 Female, age 91, right hemisphere 41.6
2045 Male, age 76, both hemispheres 39.4
Hippocampus, CA2
nTPM: 46.1
1963 Male, age 80, left hemisphere 55.9
1892 Male, age 76, both hemispheres 53.3
2249 Male, age 74, both hemispheres 47.6
2437 Female, age 94, left hemisphere 43.7
1940 Female, age 85, left hemisphere 40.2
2113 Female, age 91, right hemisphere 35.8
Hippocampus, CA3
nTPM: 45.2
2137 Male, age 80, left hemisphere 52.5
2436 Male, age 74, both hemispheres 49.9
1867 Male, age 76, both hemispheres 48.8
1891 Female, age 85, both hemispheres 44.0
2620 Female, age 94, left hemisphere 43.8
2861 Female, age 67, both hemispheres 32.1
Parahippocampal cortex
nTPM: 43.7
1850 Male, age 80, both hemispheres 53.3
2532 Female, age 72, left hemisphere 47.2
1990 Female, age 91, right hemisphere 45.8
2692 Male, age 74, both hemispheres 45.5
2018 Male, age 76, both hemispheres 45.4
1933 Female, age 85, both hemispheres 42.3
2250 Female, age 67, right hemisphere 41.2
2245 Female, age 91, both hemispheres 40.8
2693 Female, age 94, both hemispheres 39.6
2622 Female, age 67, right hemisphere 35.5
Perirhinal gyrus
nTPM: 51.2
1847 Female, age 91, left hemisphere 59.5
1794 Male, age 80, right hemisphere 52.4
1841 Female, age 85, right hemisphere 52.0
2521 Female, age 94, right hemisphere 51.3
2848 Male, age 76, right hemisphere 40.7
Subiculum
nTPM: 41.4
1977 Female, age 85, both hemispheres 45.5
1901 Male, age 80, both hemispheres 45.0
2619 Male, age 74, both hemispheres 44.1
2042 Male, age 76, both hemispheres 44.0
2729 Female, age 91, right hemisphere 35.3
2438 Female, age 94, left hemisphere 34.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 75.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.4
Samples: 197

Max nTPM: 151.3
Min nTPM: 40.0
Std nTPM: 17.6
Median nTPM: 72.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 151.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 137.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 127.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 118.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 117.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 115.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 109.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 107.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 105.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 105.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 107.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.7
FF:10169-103B7 60 years, female 121.5
FF:10153-102I9 76 years, female 94.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 49.4
Pig sample Sample description nTPM
Subiculum
nTPM: 45.3
Samples: 4

Max nTPM: 65.0
Min nTPM: 36.4
Sample A Female 65.0
Sample B Female 42.4
Sample C Male 36.4
Sample D Male 37.3
Dorsal hippocampus
nTPM: 48.3
Samples: 4

Max nTPM: 62.6
Min nTPM: 33.0
Sample A Female 62.6
Sample B Female 42.6
Sample C Male 54.9
Sample D Male 33.0
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 41.4
Sample A Female 51.2
Sample B Female 53.8
Sample C Male 51.2
Sample D Male 41.4
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 46.8
Min nTPM: 36.4
Sample A Female 46.8
Sample B Female 36.4
Sample C Male 40.6
Sample D Male 40.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 73.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.2
Samples: 4

Max nTPM: 79.5
Min nTPM: 67.7
Sample A Male 70.1
Sample B Male 79.5
Sample C Female 75.5
Sample D Female 67.7
Hippocampal formation
nTPM: 71.3
Samples: 4

Max nTPM: 83.4
Min nTPM: 62.7
Sample A Male 83.4
Sample B Male 68.7
Sample C Female 62.7
Sample D Female 70.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68632057 Antisense, RP_050125_01_F04, Mouse strain C57BL/6J (56 days, male) 1.2

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