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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
39.2
nTPM
HPA Brain:
31.7
nTPM
GTEx:
39.2
nTPM
FANTOM5:
85.5
Scaled Tags Per Million
Pig:
18.1
nTPM
Mouse:
7.1
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
31.7
Sample id
Sample description
nTPM
Amygdala nTPM: 31.7
2695
Female, age 67, right hemisphere
36.6
1987
Female, age 91, left hemisphere
33.3
2514
Male, age 75, right hemisphere
31.8
2517
Female, age 94, left hemisphere
31.3
2814
Male, age 76, right hemisphere
25.5
Basal amygdala nTPM: 27.3
2609
Male, age 75, right hemisphere
35.7
2827
Female, age 67, right hemisphere
27.9
2243
Female, age 91, right hemisphere
26.2
2110
Male, age 80, left hemisphere
25.8
1955
Male, age 76, both hemispheres
25.2
2685
Female, age 94, left hemisphere
23.1
Central amygdala nTPM: 28.4
2826
Female, age 94, left hemisphere
35.0
2515
Male, age 75, right hemisphere
33.7
2239
Male, age 80, left hemisphere
26.2
1905
Male, age 76, both hemispheres
24.5
2701
Female, age 91, right hemisphere
22.7
Corticomedial amygdala nTPM: 26.9
2428
Male, age 75, right hemisphere
33.4
2535
Female, age 67, right hemisphere
29.1
2240
Male, age 76, both hemispheres
25.5
2242
Female, age 91, right hemisphere
25.2
2429
Female, age 94, left hemisphere
24.4
2829
Male, age 80, left hemisphere
23.6
Lateral amygdala nTPM: 29.2
2830
Female, age 67, right hemisphere
37.0
2516
Male, age 75, right hemisphere
33.4
2534
Female, age 94, left hemisphere
31.2
2256
Male, age 80, left hemisphere
26.6
1883
Male, age 76, both hemispheres
24.0
2255
Female, age 91, right hemisphere
22.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
39.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 39.2
Samples: 152
Max nTPM: 66.7
Min nTPM: 19.7
Std nTPM: 8.6
Median nTPM: 38.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
66.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
62.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
59.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
58.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
57.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
57.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
55.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
55.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
53.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
53.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
53.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
52.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
52.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
51.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
51.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
51.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
51.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
50.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
49.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
49.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
49.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
49.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
49.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
48.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
47.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
47.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
46.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
45.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
45.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
44.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
44.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
44.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
44.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
44.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
44.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
44.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
43.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
43.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
43.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
43.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
43.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
43.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
43.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
43.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
43.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
42.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
42.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
42.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
42.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
41.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
41.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
41.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
41.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
41.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
41.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
41.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
41.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
40.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
40.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
40.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
40.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
40.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
40.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
39.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
39.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
39.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
39.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
39.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
39.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
38.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
38.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
38.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
38.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
38.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
37.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
37.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
37.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
37.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
37.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
37.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
37.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
36.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
36.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
36.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
36.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
36.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
36.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
36.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
35.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
35.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
35.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
35.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
35.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
35.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
34.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
34.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
34.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
34.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
34.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
34.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
34.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
33.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
33.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
33.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
33.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
33.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
33.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
33.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
33.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
33.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
32.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
32.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
32.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
32.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
32.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
32.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
32.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
32.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
31.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
31.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
31.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
31.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
31.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
30.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
30.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
30.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
27.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
27.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
27.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
26.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
24.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
23.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
23.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
22.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
22.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
21.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
20.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
19.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 7.1
Samples: 4
Max nTPM: 8.4
Min nTPM: 6.4
Sample A
Male
8.4
Sample B
Male
6.4
Sample C
Female
6.8
Sample D
Female
6.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
