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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DUSP22 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
51.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
49.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
47.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
44.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
39.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
38.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
36.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
36.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
35.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
34.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
33.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
32.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
32.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
32.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
31.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
31.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
31.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
31.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
30.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
30.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
29.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
28.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
27.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
27.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
26.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
26.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
26.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
26.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
26.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
25.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
23.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
22.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
22.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
22.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
22.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
22.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
22.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
21.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
21.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
21.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
20.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
20.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
20.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
19.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
19.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
19.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
19.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
19.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
18.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
18.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
18.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
18.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
18.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
18.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
18.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
17.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
17.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
17.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
17.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
17.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
17.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
17.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
17.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
17.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
17.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
17.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
17.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
17.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
17.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
17.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
17.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
16.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
16.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
16.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
16.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
16.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
15.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
15.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
15.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
15.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
14.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
14.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
14.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
14.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
14.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
14.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
14.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
14.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
13.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
13.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
13.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
13.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
13.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
13.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
13.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
12.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
12.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
12.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
12.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
11.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
10.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
10.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
10.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
10.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
9.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
9.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
9.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
8.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
8.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
8.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
7.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
4.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DUSP22 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.9
Number of samples
231
Samples
Sample
Description
TPM
DO45259
0 years, male, NA, stage:3, alive, 330 days
42.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
39.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
36.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
34.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
30.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
29.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
27.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
26.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
26.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
24.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
24.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
24.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
24.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
24.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
23.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
23.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
22.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
22.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
22.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
22.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
22.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
22.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
21.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
21.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
21.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
21.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
20.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
20.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
20.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
19.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
19.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
19.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
19.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
18.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
17.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
17.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
17.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
17.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
17.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
17.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
16.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
15.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
15.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
15.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
15.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
14.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
14.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
14.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
14.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
14.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
13.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
13.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
13.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
12.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
12.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
12.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
12.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
12.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
11.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
11.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
10.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
10.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
9.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
9.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
9.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
8.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
7.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
6.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
4.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
131
Tumor
2.1
724
Normal
1.1
697
Tumor
1.0
573
Tumor
1.0
877
Tumor
0.9
452
Normal
0.9
464
Normal
0.8
223
Tumor
0.8
975
Tumor
0.8
456
Normal
0.8
557
Tumor
0.8
468
Normal
0.8
474
Normal
0.7
743
Tumor
0.7
535
Tumor
0.7
467
Tumor
0.7
666
Normal
0.7
451
Tumor
0.6
965
Tumor
0.6
921
Tumor
0.6
481
Tumor
0.6
466
Normal
0.6
478
Normal
0.6
742
Normal
0.6
386
Normal
0.5
571
Tumor
0.5
648
Normal
0.5
188
Normal
0.5
384
Normal
0.5
462
Normal
0.5
394
Normal
0.5
817
Tumor
0.5
861
Tumor
0.4
482
Normal
0.4
917
Tumor
0.4
465
Tumor
0.4
816
Normal
0.4
723
Tumor
0.4
882
Normal
0.4
866
Normal
0.4
881
Tumor
0.4
477
Tumor
0.4
671
Tumor
0.4
392
Normal
0.4
662
Normal
0.4
387
Tumor
0.4
574
Normal
0.4
444
Normal
0.4
396
Normal
0.4
328
Normal
0.4
187
Tumor
0.4
391
Tumor
0.4
472
Normal
0.4
388
Normal
0.4
222
Normal
0.3
366
Normal
0.3
1041
Tumor
0.3
221
Tumor
0.3
395
Tumor
0.3
368
Normal
0.3
564
Normal
0.3
957
Tumor
0.3
966
Normal
0.3
696
Normal
0.3
868
Normal
0.3
385
Tumor
0.3
874
Normal
0.3
376
Normal
0.3
722
Normal
0.3
432
Normal
0.3
672
Normal
0.3
937
Tumor
0.3
755
Tumor
0.3
728
Normal
0.3
461
Tumor
0.3
857
Tumor
0.3
558
Normal
0.3
185
Tumor
0.3
956
Normal
0.3
686
Normal
0.2
923
Tumor
0.2
446
Normal
0.2
536
Normal
0.2
953
Tumor
0.2
715
Tumor
0.2
148
Normal
0.2
925
Tumor
0.2
171
Tumor
0.2
568
Normal
0.2
977
Tumor
0.2
963
Tumor
0.2
863
Tumor
0.2
331
Tumor
0.2
383
Tumor
0.2
147
Tumor
0.2
982
Normal
0.2
721
Tumor
0.2
664
Normal
0.2
778
Normal
0.2
191
Tumor
0.2
434
Normal
0.2
186
Normal
0.2
364
Normal
0.2
914
Normal
0.2
1028
Normal
0.2
952
Normal
0.2
1043
Tumor
0.2
713
Tumor
0.2
447
Tumor
0.2
976
Normal
0.2
1015
Tumor
0.2
365
Tumor
0.2
314
Normal
0.2
1022
Normal
0.2
864
Normal
0.2
361
Tumor
0.2
135
Tumor
0.2
1016
Normal
0.2
356
Normal
0.2
362
Normal
0.2
1014
Normal
0.2
955
Tumor
0.1
968
Normal
0.1
196
Normal
0.1
146
Normal
0.1
744
Normal
0.1
823
Tumor
0.1
195
Tumor
0.1
981
Tumor
0.1
563
Tumor
0.1
172
Normal
0.1
433
Tumor
0.1
884
Normal
0.1
327
Tumor
0.1
332
Normal
0.1
858
Normal
0.1
463
Tumor
0.1
375
Tumor
0.1
572
Normal
0.1
436
Normal
0.1
698
Normal
0.1
411
Tumor
0.1
132
Normal
0.1
918
Normal
0.1
363
Tumor
0.1
192
Normal
0.1
912
Normal
0.1
278
Normal
0.1
393
Tumor
0.1
745
Tumor
0.1
867
Tumor
0.1
218
Normal
0.1
714
Normal
0.1
756
Normal
0.1
862
Normal
0.1
1026
Normal
0.1
214
Normal
0.1
473
Tumor
0.1
412
Normal
0.1
162
Normal
0.1
984
Normal
0.1
455
Tumor
0.1
878
Normal
0.0
138
Normal
0.0
814
Normal
0.0
312
Normal
0.0
136
Normal
0.0
311
Tumor
0.0
741
Tumor
0.0
145
Tumor
0.0
824
Normal
0.0
298
Normal
0.0
913
Tumor
0.0
967
Tumor
0.0
313
Tumor
0.0
211
Tumor
0.0
915
Tumor
0.0
786
Normal
0.0
1032
Normal
0.0
661
Tumor
0.0
964
Normal
0.0
716
Normal
0.0
297
Tumor
0.0
924
Normal
0.0
746
Normal
0.0
852
Normal
0.0
443
Tumor
0.0
813
Tumor
0.0
367
Tumor
0.0
818
Normal
0.0
665
Tumor
0.0
738
Normal
0.0
944
Normal
0.0
1021
Tumor
-0.1
916
Normal
-0.1
448
Normal
-0.1
277
Tumor
-0.1
695
Tumor
-0.1
161
Tumor
-0.1
217
Tumor
-0.1
445
Tumor
-0.1
228
Normal
-0.1
663
Tumor
-0.1
416
Normal
-0.1
958
Normal
-0.1
777
Tumor
-0.1
471
Tumor
-0.1
873
Tumor
-0.1
1045
Tumor
-0.1
727
Tumor
-0.1
616
Normal
-0.2
943
Tumor
-0.2
1027
Tumor
-0.2
978
Normal
-0.2
286
Normal
-0.2
642
Normal
-0.2
851
Tumor
-0.2
142
Normal
-0.2
938
Normal
-0.2
141
Tumor
-0.2
922
Normal
-0.2
431
Tumor
-0.2
213
Tumor
-0.2
435
Tumor
-0.2
635
Tumor
-0.2
1042
Normal
-0.2
617
Tumor
-0.2
983
Tumor
-0.2
647
Tumor
-0.2
285
Tumor
-0.2
785
Tumor
-0.2
685
Tumor
-0.3
618
Normal
-0.3
737
Tumor
-0.3
415
Tumor
-0.3
627
Tumor
-0.3
284
Normal
-0.3
628
Normal
-0.3
212
Normal
-0.3
567
Tumor
-0.3
227
Tumor
-0.3
283
Tumor
-0.3
1031
Tumor
-0.3
926
Normal
-0.3
1025
Tumor
-0.3
1013
Tumor
-0.3
1044
Normal
-0.4
615
Tumor
-0.4
224
Normal
-0.4
137
Tumor
-0.4
636
Normal
-0.4
911
Tumor
-0.4
355
Tumor
-0.4
883
Tumor
-0.5
951
Tumor
-0.5
865
Tumor
-0.5
815
Tumor
-0.5
954
Normal
-0.5
641
Tumor
-0.6
1046
Normal
-0.7
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
114
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
267
Tumor
N/A
268
Normal
N/A
271
Tumor
N/A
272
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
553
Tumor
N/A
554
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.