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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC17A2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
141.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
136.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
118.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
106.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
99.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
93.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
85.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
83.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
79.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
75.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
75.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
64.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
58.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
58.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
53.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
52.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
51.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
49.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
47.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
46.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
46.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
45.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
44.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
44.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
43.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
42.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
42.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
40.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
39.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
39.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
39.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
39.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
38.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
38.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
38.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
38.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
37.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
36.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
36.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
36.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
36.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
36.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
34.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
34.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
34.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
34.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
33.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
33.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
33.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
33.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
32.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
31.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
31.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
31.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
30.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
30.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
30.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
30.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
29.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
29.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
29.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
29.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
28.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
28.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
27.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
27.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
26.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
26.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
26.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
25.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
25.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
25.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
25.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
25.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
24.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
24.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
24.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
24.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
24.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
24.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
23.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
23.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
23.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
23.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
23.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
22.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
22.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
22.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
21.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
21.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
21.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
20.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
20.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
20.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
20.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
20.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
19.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
19.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
19.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
19.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
18.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
18.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
18.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
18.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
17.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
17.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
17.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
16.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
16.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
16.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
16.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
16.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
16.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
15.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
14.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
14.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
14.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
14.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
14.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
13.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
13.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
13.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
12.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
11.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
9.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
8.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
7.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
7.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
6.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
6.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
5.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
5.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
5.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
5.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
5.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
4.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
3.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
3.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
0.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
0.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC17A2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
231
Samples
Sample
Description
TPM
DO48746
0 years, male, NA, stage:3, alive, 570 days
157.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
104.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
89.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
79.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
78.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
69.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
68.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
66.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
66.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
65.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
60.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
58.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
57.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
56.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
55.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
52.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
50.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
49.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
49.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
49.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
46.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
45.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
44.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
42.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
42.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
41.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
40.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
39.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
38.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
38.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
37.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
34.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
34.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
33.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
33.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
32.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
32.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
31.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
30.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
30.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
30.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
29.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
29.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
27.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
27.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
27.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
26.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
26.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
25.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
25.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
25.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
25.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
24.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
24.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
24.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
24.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
23.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
23.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
23.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
23.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
23.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
23.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
22.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
22.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
22.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
21.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
21.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
20.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
20.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
20.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
20.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
19.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
19.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
18.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
18.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
17.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
17.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
17.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
17.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
17.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
17.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
17.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
16.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
16.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
16.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
15.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
14.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
13.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
10.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
7.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
5.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
5.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
3.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
3.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
3.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
3.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
2.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
2.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
2.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
1.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
1.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
1.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
1.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
1.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
1.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
1.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
1.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
0.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
916
Normal
2.0
481
Tumor
1.3
911
Tumor
1.3
914
Normal
1.2
964
Normal
1.1
715
Tumor
1.1
484
Normal
1.1
1016
Normal
1.0
436
Normal
1.0
516
Normal
1.0
526
Normal
1.0
342
Normal
1.0
742
Normal
1.0
648
Normal
1.0
515
Tumor
1.0
1014
Normal
0.9
981
Tumor
0.9
514
Normal
0.9
534
Normal
0.9
482
Normal
0.9
746
Normal
0.9
472
Normal
0.9
958
Normal
0.8
546
Normal
0.8
618
Normal
0.8
968
Normal
0.8
214
Normal
0.8
868
Normal
0.8
716
Normal
0.8
518
Normal
0.8
616
Normal
0.8
756
Normal
0.8
714
Normal
0.8
786
Normal
0.8
554
Normal
0.7
366
Normal
0.7
922
Normal
0.7
394
Normal
0.7
473
Tumor
0.7
344
Normal
0.7
356
Normal
0.7
824
Normal
0.7
227
Tumor
0.7
977
Tumor
0.7
628
Normal
0.7
862
Normal
0.6
433
Tumor
0.6
785
Tumor
0.6
1032
Normal
0.6
368
Normal
0.6
462
Normal
0.6
713
Tumor
0.6
474
Normal
0.6
666
Normal
0.6
488
Normal
0.6
1026
Normal
0.6
196
Normal
0.6
982
Normal
0.6
864
Normal
0.6
615
Tumor
0.6
777
Tumor
0.6
636
Normal
0.6
728
Normal
0.6
363
Tumor
0.6
664
Normal
0.6
396
Normal
0.6
568
Normal
0.6
493
Tumor
0.6
696
Normal
0.6
358
Normal
0.6
362
Normal
0.6
452
Normal
0.5
627
Tumor
0.5
686
Normal
0.5
446
Normal
0.5
984
Normal
0.5
882
Normal
0.5
528
Normal
0.5
432
Normal
0.5
778
Normal
0.5
365
Tumor
0.5
978
Normal
0.5
662
Normal
0.5
353
Tumor
0.5
412
Normal
0.5
738
Normal
0.5
1041
Tumor
0.5
1015
Tumor
0.5
574
Normal
0.5
1025
Tumor
0.5
564
Normal
0.5
722
Normal
0.5
642
Normal
0.5
286
Normal
0.5
976
Normal
0.5
392
Normal
0.5
314
Normal
0.5
695
Tumor
0.5
494
Normal
0.4
866
Normal
0.4
364
Normal
0.4
218
Normal
0.4
388
Normal
0.4
818
Normal
0.4
1022
Normal
0.4
877
Tumor
0.4
924
Normal
0.4
926
Normal
0.4
186
Normal
0.4
723
Tumor
0.4
327
Tumor
0.4
171
Tumor
0.4
162
Normal
0.4
128
Normal
0.4
341
Tumor
0.4
354
Normal
0.3
376
Normal
0.3
1042
Normal
0.3
858
Normal
0.3
434
Normal
0.3
966
Normal
0.3
391
Tumor
0.3
298
Normal
0.3
451
Tumor
0.3
222
Normal
0.3
111
Normal
0.3
873
Tumor
0.3
217
Tumor
0.3
878
Normal
0.3
172
Normal
0.3
332
Normal
0.3
884
Normal
0.3
816
Normal
0.3
721
Tumor
0.2
328
Normal
0.2
426
Normal
0.2
352
Normal
0.2
187
Tumor
0.2
874
Normal
0.2
228
Normal
0.2
867
Tumor
0.2
463
Tumor
0.2
513
Tumor
0.2
212
Normal
0.2
443
Tumor
0.2
414
Normal
0.2
416
Normal
0.2
386
Normal
0.2
185
Tumor
0.1
912
Normal
0.1
195
Tumor
0.1
672
Normal
0.1
423
Tumor
0.1
422
Normal
0.1
148
Normal
0.1
188
Normal
0.1
917
Tumor
0.1
114
Normal
0.1
456
Normal
0.1
572
Normal
0.1
863
Tumor
0.1
312
Normal
0.1
421
Tumor
0.1
524
Normal
0.0
553
Tumor
0.0
466
Normal
0.0
284
Normal
0.0
498
Normal
0.0
913
Tumor
0.0
413
Tumor
0.0
464
Normal
0.0
573
Tumor
0.0
617
Tumor
0.0
1028
Normal
0.0
124
Normal
0.0
461
Tumor
0.0
424
Normal
0.0
428
Normal
0.0
571
Tumor
0.0
465
Tumor
0.0
112
Tumor
-0.1
967
Tumor
-0.1
224
Normal
-0.1
221
Tumor
-0.1
384
Normal
-0.1
724
Normal
-0.1
277
Tumor
-0.1
492
Normal
-0.2
915
Tumor
-0.2
431
Tumor
-0.2
444
Normal
-0.2
538
Normal
-0.2
861
Tumor
-0.2
278
Normal
-0.2
126
Normal
-0.2
127
Tumor
-0.2
537
Tumor
-0.2
387
Tumor
-0.2
468
Normal
-0.2
918
Normal
-0.2
921
Tumor
-0.3
558
Normal
-0.3
852
Normal
-0.3
557
Tumor
-0.3
343
Tumor
-0.3
147
Tumor
-0.3
478
Normal
-0.3
467
Tumor
-0.3
415
Tumor
-0.3
663
Tumor
-0.3
161
Tumor
-0.3
965
Tumor
-0.3
744
Normal
-0.3
665
Tumor
-0.4
395
Tumor
-0.4
357
Tumor
-0.4
647
Tumor
-0.4
425
Tumor
-0.4
123
Tumor
-0.4
533
Tumor
-0.4
923
Tumor
-0.4
517
Tumor
-0.4
525
Tumor
-0.5
191
Tumor
-0.5
445
Tumor
-0.5
567
Tumor
-0.5
483
Tumor
-0.5
375
Tumor
-0.5
435
Tumor
-0.5
563
Tumor
-0.5
285
Tumor
-0.5
351
Tumor
-0.5
223
Tumor
-0.5
523
Tumor
-0.5
851
Tumor
-0.5
491
Tumor
-0.6
963
Tumor
-0.6
113
Tumor
-0.6
455
Tumor
-0.6
393
Tumor
-0.6
755
Tumor
-0.6
545
Tumor
-0.6
361
Tumor
-0.7
487
Tumor
-0.7
925
Tumor
-0.7
823
Tumor
-0.7
857
Tumor
-0.7
213
Tumor
-0.7
743
Tumor
-0.7
1031
Tumor
-0.7
367
Tumor
-0.7
741
Tumor
-0.7
355
Tumor
-0.8
883
Tumor
-0.8
814
Normal
-0.9
427
Tumor
-0.9
527
Tumor
-0.9
1013
Tumor
-0.9
1027
Tumor
-0.9
192
Normal
-0.9
671
Tumor
-1.0
635
Tumor
-1.0
125
Tumor
-1.0
477
Tumor
-1.0
881
Tumor
-1.0
497
Tumor
-1.0
815
Tumor
-1.1
383
Tumor
-1.1
661
Tumor
-1.1
685
Tumor
-1.1
975
Tumor
-1.1
471
Tumor
-1.2
737
Tumor
-1.2
641
Tumor
-1.2
411
Tumor
-1.3
817
Tumor
-1.3
813
Tumor
-1.3
745
Tumor
-1.4
283
Tumor
-1.4
983
Tumor
-1.4
385
Tumor
-1.5
211
Tumor
-1.6
297
Tumor
-1.6
865
Tumor
-1.7
957
Tumor
-1.7
1021
Tumor
-1.8
331
Tumor
-1.8
727
Tumor
-1.9
313
Tumor
-2.0
311
Tumor
-2.0
231
Tumor
N/A
232
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
937
Tumor
N/A
938
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
142
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
268
Normal
N/A
943
Tumor
N/A
944
Normal
N/A
271
Tumor
N/A
272
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1046
Normal
N/A
1045
Tumor
N/A
535
Tumor
N/A
536
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.