We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C6orf62 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
212.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
200.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
188.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
188.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
178.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
175.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
173.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
172.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
168.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
165.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
164.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
162.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
160.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
152.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
149.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
148.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
147.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
144.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
143.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
142.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
141.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
140.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
138.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
135.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
132.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
131.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
130.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
129.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
129.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
128.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
123.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
122.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
120.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
119.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
118.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
118.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
115.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
113.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
113.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
113.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
112.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
111.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
111.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
110.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
109.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
109.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
108.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
107.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
107.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
107.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
105.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
104.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
103.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
103.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
103.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
102.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
102.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
101.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
100.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
98.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
98.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
98.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
97.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
97.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
96.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
94.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
94.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
94.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
94.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
94.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
94.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
94.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
93.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
90.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
90.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
90.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
89.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
88.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
88.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
87.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
87.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
87.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
87.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
86.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
85.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
85.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
85.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
85.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
84.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
84.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
84.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
83.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
82.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
82.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
82.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
82.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
82.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
82.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
82.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
82.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
81.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
81.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
81.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
81.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
80.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
80.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
80.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
77.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
76.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
76.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
75.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
75.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
74.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
74.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
73.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
73.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
73.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
73.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
72.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
72.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
71.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
71.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
70.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
70.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
70.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
70.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
70.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
70.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
70.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
70.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
69.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
69.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
69.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
69.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
68.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
68.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
68.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
68.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
67.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
67.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
67.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
67.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
67.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
67.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
67.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
66.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
66.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
66.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
66.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
66.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
66.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
65.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
65.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
65.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
65.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
65.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
65.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
64.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
64.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
64.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
64.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
64.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
63.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
63.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
62.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
62.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
62.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
62.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
62.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
62.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
62.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
62.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
61.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
61.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
61.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
61.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
61.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
60.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
60.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
60.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
60.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
60.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
60.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
59.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
59.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
59.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
59.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
58.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
58.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
58.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
58.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
58.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
58.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
57.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
57.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
57.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
57.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
57.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
57.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
56.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
56.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
56.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
56.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
56.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
55.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
55.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
55.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
55.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
55.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
54.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
54.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
54.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
53.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
53.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
52.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
52.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
52.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
51.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
51.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
51.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
51.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
51.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
51.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
50.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
50.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
50.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
50.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
49.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
49.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
49.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
49.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
49.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
48.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
48.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
48.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
48.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
48.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
48.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
48.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
47.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
47.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
47.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
47.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
47.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
47.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
46.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
46.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
46.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
46.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
46.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
45.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
45.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
45.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
45.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
45.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
45.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
44.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
44.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
44.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
43.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
43.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
43.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
43.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
43.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
43.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
43.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
43.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
42.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
42.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
42.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
41.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
41.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
41.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
41.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
41.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
41.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
40.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
40.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
40.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
39.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
39.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
39.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
39.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
39.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
39.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
39.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
38.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
38.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
38.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
38.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
37.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
37.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
37.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
37.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
37.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
36.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
36.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
36.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
36.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
36.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
36.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
36.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
36.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
35.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
35.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
35.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
34.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
34.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
34.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
34.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
33.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
33.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
32.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
32.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
32.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
32.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
31.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
31.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
31.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
30.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
30.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
29.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
29.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
29.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
29.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
29.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
29.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
28.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
28.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
28.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
28.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
27.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
27.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
26.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
26.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
25.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
25.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
25.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
25.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
24.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
24.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
22.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
22.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
21.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
21.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
21.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
21.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
21.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
20.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
20.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
19.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
19.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
18.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
18.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
13.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
13.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C6orf62 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.8
Number of samples
231
Samples
Sample
Description
TPM
DO48746
0 years, male, NA, stage:3, alive, 570 days
240.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
178.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
153.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
152.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
151.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
151.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
150.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
142.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
134.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
131.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
130.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
126.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
119.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
115.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
114.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
111.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
110.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
110.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
108.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
107.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
106.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
105.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
104.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
102.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
101.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
101.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
100.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
100.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
99.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
98.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
98.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
96.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
96.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
95.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
93.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
93.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
92.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
91.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
91.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
91.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
90.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
89.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
88.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
88.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
87.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
86.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
85.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
85.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
85.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
84.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
84.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
83.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
82.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
82.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
82.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
81.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
80.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
80.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
79.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
78.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
78.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
77.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
77.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
76.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
76.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
76.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
76.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
75.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
75.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
75.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
75.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
75.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
74.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
74.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
74.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
73.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
73.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
72.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
72.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
72.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
72.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
72.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
71.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
71.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
71.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
70.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
70.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
69.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
69.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
68.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
68.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
68.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
68.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
68.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
68.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
67.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
67.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
67.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
66.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
66.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
66.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
66.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
66.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
66.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
66.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
65.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
65.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
64.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
64.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
64.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
63.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
63.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
63.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
63.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
63.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
62.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
62.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
62.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
62.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
62.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
61.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
61.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
61.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
60.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
60.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
60.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
59.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
59.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
58.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
58.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
58.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
58.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
57.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
57.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
57.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
57.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
57.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
56.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
56.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
56.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
56.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
56.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
56.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
56.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
55.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
55.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
55.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
55.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
55.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
54.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
54.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
54.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
54.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
54.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
54.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
53.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
53.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
53.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
53.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
53.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
53.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
52.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
52.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
52.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
51.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
51.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
50.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
50.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
49.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
48.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
48.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
48.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
48.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
48.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
48.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
47.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
47.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
47.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
47.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
46.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
46.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
46.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
45.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
45.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
44.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
44.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
43.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
43.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
43.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
43.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
42.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
42.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
42.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
42.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
41.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
41.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
41.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
40.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
40.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
40.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
39.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
38.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
38.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
38.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
38.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
38.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
37.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
37.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
37.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
35.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
34.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
34.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
33.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
33.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
33.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
33.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
33.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
32.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
29.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
29.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
27.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
27.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
26.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
26.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
25.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
24.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
24.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
22.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
21.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
