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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCNC is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
96.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
64.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
62.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
61.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
60.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
56.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
55.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
53.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
51.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
51.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
50.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
50.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
49.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
48.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
47.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
47.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
47.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
46.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
45.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
45.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
45.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
45.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
44.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
44.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
44.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
44.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
43.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
43.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
42.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
42.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
42.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
42.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
42.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
42.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
42.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
41.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
40.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
39.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
39.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
39.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
39.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
39.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
39.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
39.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
39.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
38.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
38.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
38.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
38.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
37.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
37.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
37.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
37.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
37.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
37.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
37.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
36.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
36.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
36.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
36.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
36.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
36.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
36.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
36.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
35.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
35.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
35.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
35.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
35.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
35.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
34.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
34.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
34.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
34.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
34.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
34.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
34.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
34.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
34.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
34.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
33.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
33.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
33.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
33.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
33.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
32.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
32.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
32.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
32.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
32.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
32.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
32.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
32.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
31.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
31.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
31.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
31.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
31.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
31.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
31.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
31.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
31.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
31.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
30.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
30.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
30.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
30.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
30.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
30.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
30.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
30.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
30.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
29.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
29.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
29.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
29.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
29.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
29.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
28.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
28.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
28.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
28.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
28.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
28.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
28.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
28.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
28.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
27.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
27.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
27.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
27.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
27.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
27.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
27.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
27.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
26.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
26.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
26.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
26.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
26.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
26.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
26.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
26.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
26.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
26.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
26.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
25.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
25.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
25.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
25.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
25.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
25.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
24.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
24.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
24.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
24.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
24.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
24.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
24.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
24.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
24.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
24.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
24.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
24.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
24.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
24.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
24.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
24.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
24.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
23.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
23.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
23.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
23.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
23.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
23.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
22.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
22.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
22.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
22.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
22.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
22.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
22.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
22.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
22.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
21.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
21.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
21.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
21.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
21.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
21.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
21.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
21.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
21.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
21.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
20.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
20.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
20.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
20.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
20.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
20.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
20.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
20.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
20.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
19.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
19.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
19.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
19.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
19.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
19.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
19.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
19.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
18.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
18.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
18.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
18.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
18.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
18.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
18.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
18.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
18.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
17.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
17.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
17.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
17.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
17.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
17.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
17.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
16.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
16.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
15.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
15.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
15.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
15.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
14.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
14.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
14.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
14.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
14.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
14.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
14.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
13.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
13.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
13.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
13.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
13.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
13.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
12.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
12.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
12.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
11.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
11.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
11.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
11.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
11.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
11.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
10.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
9.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
9.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCNC is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.4
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
98.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
79.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
67.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
66.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
61.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
59.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
59.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
58.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
55.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
55.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
54.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
53.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
52.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
51.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
50.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
50.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
49.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
48.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
48.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
48.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
47.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
47.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
47.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
47.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
46.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
46.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
46.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
46.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
45.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
44.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
44.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
44.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
44.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
44.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
44.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
43.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
43.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
43.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
43.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
43.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
42.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
42.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
42.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
41.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
41.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
41.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
41.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
41.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
41.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
40.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
40.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
39.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
38.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
38.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
38.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
38.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
37.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
37.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
37.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
37.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
36.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
36.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
36.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
36.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
36.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
36.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
36.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
36.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
35.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
35.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
35.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
35.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
34.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
34.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
34.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
34.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
34.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
33.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
33.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
33.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
33.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
33.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
33.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
33.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
32.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
32.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
32.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
32.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
32.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
32.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
32.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
32.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
31.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
31.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
31.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
31.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
31.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
31.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
31.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
31.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
31.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
30.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
30.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
30.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
30.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
30.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
30.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
30.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
30.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
30.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
29.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
29.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
29.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
29.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
29.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
28.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
28.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
28.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
27.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
27.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
27.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
27.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
27.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
27.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
27.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
26.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
26.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
26.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
25.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
25.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
25.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
25.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
25.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
25.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
24.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
24.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
24.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
24.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
24.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
24.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
24.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
24.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
24.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
24.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
23.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
23.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
23.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
23.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
23.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
23.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
23.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
23.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
23.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
23.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
22.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
22.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
22.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
22.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
22.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
22.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
21.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
21.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
21.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
21.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
21.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
21.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
21.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
20.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
20.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
19.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
19.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
19.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
19.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
18.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
18.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
18.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
18.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
18.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
17.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
17.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
17.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
17.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
16.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
16.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
15.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
14.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
11.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
11.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
11.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
11.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
10.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
351
Tumor
1.4
425
Tumor
1.0
743
Tumor
1.0
357
Tumor
1.0
341
Tumor
0.9
427
Tumor
0.9
356
Normal
0.9
364
Normal
0.9
533
Tumor
0.8
367
Tumor
0.8
413
Tumor
0.8
661
Tumor
0.8
647
Tumor
0.7
366
Normal
0.7
343
Tumor
0.7
665
Tumor
0.7
365
Tumor
0.7
384
Normal
0.6
671
Tumor
0.6
361
Tumor
0.6
618
Normal
0.6
573
Tumor
0.6
416
Normal
0.6
376
Normal
0.6
957
Tumor
0.5
983
Tumor
0.5
663
Tumor
0.5
423
Tumor
0.5
636
Normal
0.5
353
Tumor
0.5
641
Tumor
0.5
724
Normal
0.5
965
Tumor
0.5
617
Tumor
0.5
537
Tumor
0.4
616
Normal
0.4
545
Tumor
0.4
642
Normal
0.4
414
Normal
0.4
1013
Tumor
0.4
627
Tumor
0.4
362
Normal
0.4
628
Normal
0.4
428
Normal
0.4
967
Tumor
0.4
741
Tumor
0.3
421
Tumor
0.3
563
Tumor
0.3
615
Tumor
0.3
368
Normal
0.3
422
Normal
0.3
111
Normal
0.2
424
Normal
0.2
344
Normal
0.2
976
Normal
0.2
571
Tumor
0.2
648
Normal
0.2
1031
Tumor
0.2
426
Normal
0.2
535
Tumor
0.2
737
Tumor
0.2
978
Normal
0.2
1022
Normal
0.2
435
Tumor
0.2
964
Normal
0.2
447
Tumor
0.2
358
Normal
0.2
432
Normal
0.2
1021
Tumor
0.1
383
Tumor
0.1
385
Tumor
0.1
352
Normal
0.1
433
Tumor
0.1
431
Tumor
0.1
1044
Normal
0.1
727
Tumor
0.1
328
Normal
0.1
557
Tumor
0.1
527
Tumor
0.1
443
Tumor
0.1
977
Tumor
0.1
635
Tumor
0.0
375
Tumor
0.0
553
Tumor
0.0
534
Normal
0.0
1046
Normal
0.0
567
Tumor
0.0
662
Normal
0.0
387
Tumor
0.0
742
Normal
0.0
1043
Tumor
0.0
444
Normal
0.0
445
Tumor
0.0
672
Normal
0.0
975
Tumor
0.0
393
Tumor
0.0
1025
Tumor
0.0
1045
Tumor
-0.1
878
Normal
-0.1
666
Normal
-0.1
883
Tumor
-0.1
342
Normal
-0.1
744
Normal
-0.1
354
Normal
-0.1
664
Normal
-0.1
446
Normal
-0.1
738
Normal
-0.1
395
Tumor
-0.1
327
Tumor
-0.1
528
Normal
-0.1
434
Normal
-0.1
968
Normal
-0.1
568
Normal
-0.1
966
Normal
-0.1
963
Tumor
-0.1
436
Normal
-0.1
981
Tumor
-0.1
728
Normal
-0.1
877
Tumor
-0.1
958
Normal
-0.1
1015
Tumor
-0.2
574
Normal
-0.2
723
Tumor
-0.2
412
Normal
-0.2
448
Normal
-0.2
415
Tumor
-0.2
1026
Normal
-0.2
881
Tumor
-0.2
564
Normal
-0.2
982
Normal
-0.2
411
Tumor
-0.2
536
Normal
-0.3
127
Tumor
-0.3
1032
Normal
-0.3
546
Normal
-0.3
1027
Tumor
-0.3
1014
Normal
-0.3
554
Normal
-0.3
391
Tumor
-0.3
913
Tumor
-0.3
697
Tumor
-0.3
1016
Normal
-0.3
1042
Normal
-0.4
698
Normal
-0.4
984
Normal
-0.4
538
Normal
-0.4
113
Tumor
-0.4
463
Tumor
-0.4
396
Normal
-0.4
386
Normal
-0.4
452
Normal
-0.5
394
Normal
-0.5
388
Normal
-0.5
1041
Tumor
-0.5
572
Normal
-0.6
1028
Normal
-0.6
114
Normal
-0.6
392
Normal
-0.6
123
Tumor
-0.6
882
Normal
-0.6
355
Tumor
-0.6
912
Normal
-0.7
911
Tumor
-0.7
112
Tumor
-0.7
451
Tumor
-0.7
455
Tumor
-0.7
558
Normal
-0.7
363
Tumor
-0.7
465
Tumor
-0.7
125
Tumor
-0.8
884
Normal
-0.8
467
Tumor
-0.8
126
Normal
-0.9
914
Normal
-0.9
456
Normal
-0.9
466
Normal
-0.9
124
Normal
-1.0
128
Normal
-1.0
464
Normal
-1.1
468
Normal
-1.2
488
Normal
-1.5
492
Normal
-1.8
491
Tumor
-2.1
498
Normal
-2.1
493
Tumor
-2.3
497
Tumor
-3.3
483
Tumor
-3.3
494
Normal
-3.8
487
Tumor
-3.9
484
Normal
-3.9
471
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
473
Tumor
N/A
232
Normal
N/A
474
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
142
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
271
Tumor
N/A
272
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
721
Tumor
N/A
722
Normal
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
857
Tumor
N/A
858
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
864
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
756
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
777
Tumor
N/A
778
Normal
N/A
785
Tumor
N/A
786
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
331
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
223
Tumor
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
