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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KCTD20 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
48.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
43.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
41.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
39.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
39.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
37.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
36.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
35.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
34.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
34.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
33.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
33.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
33.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
33.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
32.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
32.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
31.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
31.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
31.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
31.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
31.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
30.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
29.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
29.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
29.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
28.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
28.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
27.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
27.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
27.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
27.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
27.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
26.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
26.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
26.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
25.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
25.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
25.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
24.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
23.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
23.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
23.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
23.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
23.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
23.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
22.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
22.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
22.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
22.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
22.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
22.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
22.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
21.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
21.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
21.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
21.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
21.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
21.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
21.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
21.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
21.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
21.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
21.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
20.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
20.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
20.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
20.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
20.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
20.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
20.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
20.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
20.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
19.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
19.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
19.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
19.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
18.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
18.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
18.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
18.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
18.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
18.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
18.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
18.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
18.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
18.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
17.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
17.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
17.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
17.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
17.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
17.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
17.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
17.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
17.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
17.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
17.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
17.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
17.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
16.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
16.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
16.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
16.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
16.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
16.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
16.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
16.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
16.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
15.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
15.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
15.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
15.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
15.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
15.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
15.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
15.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
15.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
15.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
14.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
14.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
14.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
14.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
14.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
14.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
14.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
13.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
13.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
13.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
13.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
13.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
13.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
12.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
12.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
12.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
11.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
11.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
11.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
11.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
7.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KCTD20 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
231
Samples
Sample
Description
TPM
DO48746
0 years, male, NA, stage:3, alive, 570 days
68.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
38.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
35.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
33.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
33.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
32.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
29.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
29.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
28.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
28.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
27.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
27.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
26.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
26.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
26.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
25.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
24.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
24.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
23.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
23.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
23.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
23.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
22.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
22.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
22.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
21.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
21.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
21.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
21.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
20.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
20.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
20.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
20.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
19.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
19.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
19.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
19.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
19.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
18.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
18.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
18.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
17.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
17.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
17.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
17.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
17.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
17.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
16.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
16.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
15.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
15.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
15.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
15.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
15.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
15.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
15.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
15.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
14.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
13.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
13.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
13.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
13.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
13.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
13.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
12.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
12.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
11.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
11.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
11.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
11.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
10.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
10.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
10.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
9.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
8.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
4.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
4.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
3.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
913
Tumor
1.8
883
Tumor
1.4
976
Normal
1.2
1041
Tumor
1.1
965
Tumor
1.1
957
Tumor
1.1
473
Tumor
1.0
951
Tumor
1.0
975
Tumor
0.8
1021
Tumor
0.7
635
Tumor
0.7
525
Tumor
0.7
642
Normal
0.7
943
Tumor
0.7
937
Tumor
0.7
477
Tumor
0.7
925
Tumor
0.7
968
Normal
0.6
695
Tumor
0.6
327
Tumor
0.6
355
Tumor
0.6
1025
Tumor
0.6
911
Tumor
0.6
862
Normal
0.5
914
Normal
0.5
881
Tumor
0.5
636
Normal
0.5
956
Normal
0.4
618
Normal
0.4
517
Tumor
0.4
221
Tumor
0.4
617
Tumor
0.4
482
Normal
0.4
481
Tumor
0.4
873
Tumor
0.4
878
Normal
0.4
534
Normal
0.4
411
Tumor
0.4
877
Tumor
0.4
923
Tumor
0.4
514
Normal
0.4
924
Normal
0.3
955
Tumor
0.3
958
Normal
0.3
967
Tumor
0.3
817
Tumor
0.3
478
Normal
0.3
864
Normal
0.3
865
Tumor
0.3
713
Tumor
0.3
964
Normal
0.3
966
Normal
0.3
944
Normal
0.3
131
Tumor
0.3
926
Normal
0.3
474
Normal
0.3
1027
Tumor
0.3
863
Tumor
0.3
953
Tumor
0.3
433
Tumor
0.2
938
Normal
0.2
1031
Tumor
0.2
227
Tumor
0.2
685
Tumor
0.2
857
Tumor
0.2
715
Tumor
0.2
686
Normal
0.2
415
Tumor
0.2
526
Normal
0.2
868
Normal
0.2
915
Tumor
0.2
443
Tumor
0.2
921
Tumor
0.2
223
Tumor
0.2
858
Normal
0.2
533
Tumor
0.2
228
Normal
0.2
721
Tumor
0.2
866
Normal
0.2
954
Normal
0.2
874
Normal
0.2
628
Normal
0.2
815
Tumor
0.2
922
Normal
0.2
867
Tumor
0.2
1013
Tumor
0.2
132
Normal
0.2
224
Normal
0.2
952
Normal
0.2
135
Tumor
0.2
145
Tumor
0.2
696
Normal
0.2
465
Tumor
0.2
524
Normal
0.2
963
Tumor
0.2
818
Normal
0.2
137
Tumor
0.1
136
Normal
0.1
416
Normal
0.1
714
Normal
0.1
513
Tumor
0.1
823
Tumor
0.1
616
Normal
0.1
882
Normal
0.1
431
Tumor
0.1
984
Normal
0.1
445
Tumor
0.1
472
Normal
0.1
464
Normal
0.1
462
Normal
0.1
1016
Normal
0.1
212
Normal
0.1
432
Normal
0.1
515
Tumor
0.1
722
Normal
0.1
444
Normal
0.1
814
Normal
0.1
192
Normal
0.1
146
Normal
0.1
467
Tumor
0.1
861
Tumor
0.1
211
Tumor
0.1
523
Tumor
0.1
446
Normal
0.1
518
Normal
0.1
364
Normal
0.1
516
Normal
0.0
1026
Normal
0.0
546
Normal
0.0
284
Normal
0.0
1032
Normal
0.0
451
Tumor
0.0
1014
Normal
0.0
412
Normal
0.0
571
Tumor
0.0
786
Normal
0.0
471
Tumor
0.0
286
Normal
0.0
982
Normal
0.0
918
Normal
0.0
528
Normal
0.0
553
Tumor
0.0
824
Normal
0.0
456
Normal
0.0
756
Normal
0.0
384
Normal
0.0
563
Tumor
0.0
564
Normal
0.0
361
Tumor
0.0
574
Normal
0.0
1028
Normal
0.0
852
Normal
0.0
463
Tumor
0.0
745
Tumor
0.0
367
Tumor
0.0
1022
Normal
0.0
366
Normal
-0.1
363
Tumor
-0.1
375
Tumor
-0.1
222
Normal
-0.1
365
Tumor
-0.1
461
Tumor
-0.1
452
Normal
-0.1
851
Tumor
-0.1
138
Normal
-0.1
716
Normal
-0.1
554
Normal
-0.1
368
Normal
-0.1
362
Normal
-0.1
376
Normal
-0.1
195
Tumor
-0.1
558
Normal
-0.1
785
Tumor
-0.1
328
Normal
-0.1
816
Normal
-0.1
283
Tumor
-0.1
917
Tumor
-0.1
285
Tumor
-0.1
1042
Normal
-0.1
142
Normal
-0.1
813
Tumor
-0.1
746
Normal
-0.1
217
Tumor
-0.1
568
Normal
-0.1
218
Normal
-0.1
434
Normal
-0.1
627
Tumor
-0.1
213
Tumor
-0.1
435
Tumor
-0.1
196
Normal
-0.2
538
Normal
-0.2
557
Tumor
-0.2
436
Normal
-0.2
978
Normal
-0.2
916
Normal
-0.2
466
Normal
-0.2
777
Tumor
-0.2
572
Normal
-0.2
468
Normal
-0.2
191
Tumor
-0.2
641
Tumor
-0.2
527
Tumor
-0.2
141
Tumor
-0.2
214
Normal
-0.3
977
Tumor
-0.3
455
Tumor
-0.3
1015
Tumor
-0.3
573
Tumor
-0.3
615
Tumor
-0.3
356
Normal
-0.3
383
Tumor
-0.4
981
Tumor
-0.4
537
Tumor
-0.4
983
Tumor
-0.4
778
Normal
-0.4
912
Normal
-0.4
755
Tumor
-0.4
567
Tumor
-0.5
545
Tumor
-0.6
884
Normal
-0.6
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
114
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
1045
Tumor
N/A
744
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
423
Tumor
N/A
665
Tumor
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
331
Tumor
N/A
332
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
