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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
43.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
43.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
42.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
34.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
33.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
33.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
33.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
30.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
30.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
29.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
27.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
26.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
20.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
14.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
10.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
5.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD9 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
220.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
166.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
148.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
145.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
144.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
144.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
143.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
142.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
141.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
136.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
135.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
133.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
132.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
130.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
130.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
128.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
128.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
127.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
125.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
123.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
121.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
121.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
120.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
120.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
119.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
118.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
118.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
118.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
117.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
116.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
108.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
108.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
107.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
103.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
103.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
101.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
101.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
101.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
100.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
100.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
99.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
98.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
98.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
94.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
94.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
94.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
92.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
92.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
91.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
90.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
90.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
89.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
89.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
88.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
88.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
87.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
86.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
86.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
85.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
85.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
85.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
84.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
84.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
83.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
82.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
81.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
81.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
81.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
80.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
80.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
78.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
78.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
78.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
76.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
76.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
75.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
73.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
73.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
73.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
73.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
72.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
72.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
71.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
71.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
71.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
71.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
71.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
71.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
70.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
70.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
70.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
70.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
70.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
70.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
70.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
70.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
69.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
69.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
68.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
68.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
67.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
67.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
67.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
67.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
66.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
66.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
65.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
65.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
64.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
64.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
64.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
64.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
64.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
63.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
63.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
63.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
62.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
62.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
62.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
61.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
61.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
61.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
61.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
61.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
61.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
60.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
60.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
60.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
60.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
60.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
60.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
60.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
60.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
60.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
59.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
59.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
59.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
59.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
59.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
59.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
58.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
58.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
58.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
57.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
57.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
57.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
57.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
57.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
56.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
56.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
55.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
55.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
55.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
54.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
54.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
53.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
52.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
51.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
51.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
51.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
50.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
50.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
50.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
50.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
50.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
49.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
49.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
49.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
49.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
48.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
48.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
48.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
48.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
48.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
48.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
48.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
48.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
47.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
46.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
46.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
46.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
46.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
45.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
45.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
45.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
45.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
44.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
44.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
44.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
43.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
43.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
43.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
42.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
42.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
42.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
42.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
41.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
41.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
41.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
41.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
40.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
40.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
40.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
39.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
39.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
39.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
38.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
38.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
38.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
38.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
38.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
37.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
37.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
37.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
36.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
36.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
36.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
36.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
36.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
36.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
36.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
35.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
35.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
35.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
35.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
35.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
33.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
33.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
33.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
32.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
32.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
32.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
32.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
32.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
31.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
31.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
31.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
30.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
30.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
30.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
30.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
29.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
29.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
29.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
29.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
28.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
28.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
27.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
27.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
26.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
26.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
26.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
26.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
25.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
25.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
25.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
25.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
24.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
24.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
24.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
23.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
22.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
22.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
22.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
22.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
21.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
20.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
19.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
18.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
18.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
13.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
7.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD9 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
166.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
143.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
117.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
99.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
94.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
93.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
91.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
90.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
86.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
85.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
82.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
82.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
78.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
69.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
67.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
66.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
61.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
60.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
59.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
58.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
58.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
55.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
54.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
51.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
51.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
49.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
49.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
47.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
45.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
44.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
43.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
38.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
38.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
38.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
37.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
33.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
27.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
11.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NEDD9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
197.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
117.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
82.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
80.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
70.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
68.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
67.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
59.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
58.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
54.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
54.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
52.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
49.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
47.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
44.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
44.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
43.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
41.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
36.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
35.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
29.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
28.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
28.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
27.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
20.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
20.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
19.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
16.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
15.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
12.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
11.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
8.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
7.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
6.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
6.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
5.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.3
CPT0069160003
Tumor
1.1
CPT0079480003
Tumor
0.7
CPT0025350003
Tumor
0.6
CPT0065810003
Tumor
0.6
CPT0065690003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0001180009
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0012080003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0079510001
Normal
0.3
CPT0084590001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0086890003
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0077320001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0026420001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0069190001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0077110003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0066520001
Normal
-0.2
CPT0078930003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0023350003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0088480003
Tumor
-0.3
CPT0078800003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0077140001
Normal
-0.4
CPT0089460004
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0078510003
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0076350001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0012900004
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0025170003
Tumor
-0.5
CPT0012550003
Tumor
-0.6
CPT0088550004
Tumor
-0.6
CPT0092740003
Normal
-0.6
CPT0002350011
Tumor
-0.7
CPT0077310003
Tumor
-0.7
CPT0010160003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0086950003
Tumor
-1.0
CPT0063630003
Tumor
-1.1
CPT0064370003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.