HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.6 nTPM
HPA Brain:23.4 nTPM
GTEx:21.6 nTPM
FANTOM5:34.0 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:5.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB073398
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 19.9
1898 Male, age 80, left hemisphere 24.9
1855 Male, age 76, left hemisphere 20.1
2529 Female, age 94, left hemisphere 19.7
2621 Female, age 67, right hemisphere 19.1
2148 Female, age 91, left hemisphere 18.0
1911 Female, age 85, right hemisphere 17.8
Dentate gyrus
nTPM: 18.2
1927 Female, age 91, both hemispheres 22.5
2010 Male, age 76, both hemispheres 20.1
2246 Female, age 85, both hemispheres 18.5
2530 Female, age 94, left hemisphere 16.8
2528 Male, age 74, both hemispheres 16.5
2531 Female, age 67, both hemispheres 15.0
Entorhinal gyrus
nTPM: 18.8
1938 Female, age 85, left hemisphere 24.2
2117 Female, age 91, right hemisphere 20.5
2764 Male, age 80, right hemisphere 19.7
1787 Male, age 76, left hemisphere 17.8
2686 Male, age 75, right hemisphere 16.2
2613 Female, age 94, left hemisphere 14.6
Hippocampus, CA1
nTPM: 21.7
2749 Male, age 80, left hemisphere 29.1
2527 Male, age 74, both hemispheres 21.8
1873 Female, age 85, both hemispheres 21.6
2082 Female, age 91, right hemisphere 18.2
2045 Male, age 76, both hemispheres 17.6
Hippocampus, CA2
nTPM: 21.4
1892 Male, age 76, both hemispheres 25.1
2249 Male, age 74, both hemispheres 23.3
1963 Male, age 80, left hemisphere 23.0
2113 Female, age 91, right hemisphere 19.3
1940 Female, age 85, left hemisphere 19.1
2437 Female, age 94, left hemisphere 18.8
Hippocampus, CA3
nTPM: 19.9
2137 Male, age 80, left hemisphere 25.8
2436 Male, age 74, both hemispheres 23.9
1867 Male, age 76, both hemispheres 22.5
1891 Female, age 85, both hemispheres 20.0
2620 Female, age 94, left hemisphere 14.9
2861 Female, age 67, both hemispheres 12.6
Parahippocampal cortex
nTPM: 20.5
1850 Male, age 80, both hemispheres 26.7
1933 Female, age 85, both hemispheres 22.0
1990 Female, age 91, right hemisphere 21.9
2250 Female, age 67, right hemisphere 21.7
2018 Male, age 76, both hemispheres 20.4
2245 Female, age 91, both hemispheres 20.0
2693 Female, age 94, both hemispheres 19.9
2692 Male, age 74, both hemispheres 19.8
2532 Female, age 72, left hemisphere 17.9
2622 Female, age 67, right hemisphere 14.5
Perirhinal gyrus
nTPM: 23.4
1847 Female, age 91, left hemisphere 26.9
1841 Female, age 85, right hemisphere 25.0
1794 Male, age 80, right hemisphere 24.4
2848 Male, age 76, right hemisphere 20.6
2521 Female, age 94, right hemisphere 20.1
Subiculum
nTPM: 19.3
1977 Female, age 85, both hemispheres 21.5
1901 Male, age 80, both hemispheres 21.4
2438 Female, age 94, left hemisphere 19.2
2619 Male, age 74, both hemispheres 18.4
2042 Male, age 76, both hemispheres 18.1
2729 Female, age 91, right hemisphere 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.6
Samples: 197

Max nTPM: 55.6
Min nTPM: 12.9
Std nTPM: 5.2
Median nTPM: 21.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 38.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 36.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 35.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 33.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 32.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 32.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 31.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 31.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 30.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.0
FF:10153-102I9 76 years, female 39.0
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.8
Pig sample Sample description nTPM
Subiculum
nTPM: 18.4
Samples: 4

Max nTPM: 19.4
Min nTPM: 17.5
Sample A Female 19.4
Sample B Female 18.0
Sample C Male 18.6
Sample D Male 17.5
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 23.2
Min nTPM: 20.5
Sample A Female 23.2
Sample B Female 21.4
Sample C Male 22.0
Sample D Male 20.5
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.7
Sample A Female 16.7
Sample B Female 21.1
Sample C Male 17.8
Sample D Male 16.7
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.6
Sample A Female 17.6
Sample B Female 18.3
Sample C Male 19.1
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.6
Sample A Male 6.8
Sample B Male 4.0
Sample C Female 3.6
Sample D Female 6.2
Hippocampal formation
nTPM: 3.8
Samples: 4

Max nTPM: 5.4
Min nTPM: 1.7
Sample A Male 4.2
Sample B Male 5.4
Sample C Female 1.7
Sample D Female 3.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69817049 Antisense, RP_050510_02_E05, Mouse strain C57BL/6J (56 days, male) 0.8

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