HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:3.3 nTPM
HPA Brain:24.8 nTPM
GTEx:3.3 nTPM
FANTOM5:10.1 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:11.3 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026775
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.8
1855 Male, age 76, left hemisphere 22.8
2148 Female, age 91, left hemisphere 19.9
2529 Female, age 94, left hemisphere 19.1
1898 Male, age 80, left hemisphere 17.7
2621 Female, age 67, right hemisphere 17.4
1911 Female, age 85, right hemisphere 16.0
Dentate gyrus
nTPM: 22.4
2010 Male, age 76, both hemispheres 26.7
2530 Female, age 94, left hemisphere 24.6
2528 Male, age 74, both hemispheres 22.4
2531 Female, age 67, both hemispheres 22.3
1927 Female, age 91, both hemispheres 19.5
2246 Female, age 85, both hemispheres 18.9
Entorhinal gyrus
nTPM: 24.8
2613 Female, age 94, left hemisphere 29.1
1938 Female, age 85, left hemisphere 28.6
2764 Male, age 80, right hemisphere 25.6
2686 Male, age 75, right hemisphere 23.6
1787 Male, age 76, left hemisphere 23.1
2117 Female, age 91, right hemisphere 18.9
Hippocampus, CA1
nTPM: 19.2
2082 Female, age 91, right hemisphere 24.6
2045 Male, age 76, both hemispheres 20.6
2527 Male, age 74, both hemispheres 20.4
1873 Female, age 85, both hemispheres 16.5
2749 Male, age 80, left hemisphere 13.7
Hippocampus, CA2
nTPM: 20.7
2437 Female, age 94, left hemisphere 26.1
2249 Male, age 74, both hemispheres 23.8
1940 Female, age 85, left hemisphere 20.7
2113 Female, age 91, right hemisphere 19.6
1892 Male, age 76, both hemispheres 17.2
1963 Male, age 80, left hemisphere 16.8
Hippocampus, CA3
nTPM: 20.2
2620 Female, age 94, left hemisphere 27.4
2861 Female, age 67, both hemispheres 23.7
2436 Male, age 74, both hemispheres 22.8
1891 Female, age 85, both hemispheres 19.6
1867 Male, age 76, both hemispheres 16.6
2137 Male, age 80, left hemisphere 11.0
Parahippocampal cortex
nTPM: 22.6
1990 Female, age 91, right hemisphere 25.8
2622 Female, age 67, right hemisphere 25.1
1850 Male, age 80, both hemispheres 24.5
2692 Male, age 74, both hemispheres 23.8
2250 Female, age 67, right hemisphere 23.5
1933 Female, age 85, both hemispheres 22.5
2532 Female, age 72, left hemisphere 21.6
2693 Female, age 94, both hemispheres 20.8
2245 Female, age 91, both hemispheres 19.8
2018 Male, age 76, both hemispheres 18.5
Perirhinal gyrus
nTPM: 20.6
1847 Female, age 91, left hemisphere 27.4
1794 Male, age 80, right hemisphere 21.5
1841 Female, age 85, right hemisphere 19.8
2848 Male, age 76, right hemisphere 19.4
2521 Female, age 94, right hemisphere 14.8
Subiculum
nTPM: 21.0
2619 Male, age 74, both hemispheres 23.8
2042 Male, age 76, both hemispheres 22.9
2438 Female, age 94, left hemisphere 22.2
2729 Female, age 91, right hemisphere 22.2
1977 Female, age 85, both hemispheres 20.1
1901 Male, age 80, both hemispheres 14.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.3
Samples: 197

Max nTPM: 15.3
Min nTPM: 0.9
Std nTPM: 1.7
Median nTPM: 3.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 15.3
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 10.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 9.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 9.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 9.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 7.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 7.0
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 6.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 6.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 6.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 6.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.1
FF:10153-102I9 76 years, female 12.0
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.1
Pig sample Sample description nTPM
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 23.1
Min nTPM: 17.6
Sample A Female 23.1
Sample B Female 22.3
Sample C Male 21.4
Sample D Male 17.6
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 14.1
Sample A Female 18.3
Sample B Female 16.3
Sample C Male 21.9
Sample D Male 14.1
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 22.0
Min nTPM: 16.0
Sample A Female 16.0
Sample B Female 22.0
Sample C Male 19.8
Sample D Male 18.6
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 20.6
Min nTPM: 16.2
Sample A Female 19.4
Sample B Female 17.6
Sample C Male 20.6
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.5
Sample A Male 9.7
Sample B Male 8.5
Sample C Female 8.9
Sample D Female 11.2
Hippocampal formation
nTPM: 11.3
Samples: 4

Max nTPM: 14.7
Min nTPM: 8.7
Sample A Male 9.1
Sample B Male 12.7
Sample C Female 14.7
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
71493861 Antisense, RP_050913_02_H05, Mouse strain C57BL/6J (56 days, male) 17.9
73907494 Antisense, RP_050927_02_E03, Mouse strain C57BL/6J (56 days, male) 5.0
71613643 Antisense, RP_050927_02_E03, Mouse strain C57BL/6J (56 days, male) 3.3

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