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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
281.1
nTPM
GTEx:
281.1
nTPM
FANTOM5:
271.3
Scaled Tags Per Million
Mouse:
475.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
281.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 281.1
Samples: 105
Max nTPM: 495.2
Min nTPM: 158.4
Std nTPM: 57.6
Median nTPM:
413_1
59 years, female
495.2
490_1
67 years, female
445.7
501_1
88 years, male
385.3
229_1
69 years, female
377.8
162_1
79 years, female
374.3
43_1
64 years, female
372.1
491_1
89 years, female
368.9
117_1
61 years, male
364.3
153_1
70 years, female
355.2
313_1
79 years, female
354.1
142_1
61 years, female
350.0
466_1
57 years, female
349.4
9_1
66 years, female
346.3
120_1
70 years, female
344.8
414_1
84 years, female
344.2
396_1
62 years, male
343.3
6_1
73 years, female
339.3
375_1
74 years, female
339.0
386_1
76 years, male
335.1
315_1
62 years, female
331.7
32_1
67 years, male
327.2
379_1
60 years, male
325.5
126_1
63 years, male
324.8
17_1
71 years, male
323.5
246_1
77 years, male
322.5
265_1
87 years, male
321.9
4_1
88 years, female
321.0
217_1
76 years, male
318.2
139_1
64 years, female
317.7
115_1
83 years, male
317.3
376_1
75 years, female
315.1
243_1
75 years, male
313.2
324_1
76 years, male
311.3
81_1
67 years, male
310.9
145_1
84 years, male
310.0
119_1
70 years, female
307.4
316_1
62 years, male
301.3
149_1
88 years, male
299.6
415_1
77 years, female
296.9
468_1
89 years, male
294.6
322_1
76 years, male
293.6
254_1
77 years, female
290.9
109_1
81 years, female
290.6
321_1
62 years, female
289.8
404_1
82 years, female
289.2
89_1
63 years, male
286.9
18_1
88 years, male
286.4
288_1
66 years, female
286.4
425_1
59 years, female
284.4
452_1
88 years, female
283.6
42_1
85 years, male
279.6
506_1
65 years, male
278.4
2_1
77 years, female
277.5
264_1
73 years, female
277.0
499_1
55 years, female
275.4
35_1
74 years, female
274.5
286_1
68 years, female
273.9
348_1
84 years, male
271.0
377_1
82 years, female
270.2
99_1
64 years, male
270.1
347_1
72 years, male
269.7
320_1
89 years, female
268.8
518_1
75 years, female
268.5
177_1
74 years, male
266.2
137_1
83 years, male
265.0
335_1
73 years, female
264.4
394_1
75 years, female
256.2
319_1
81 years, male
252.7
189_1
76 years, male
252.2
172_1
72 years, female
248.7
237_1
82 years, male
247.3
266_1
85 years, male
245.3
447_1
81 years, male
242.3
352_1
62 years, male
241.1
480_1
63 years, male
241.1
495_1
57 years, female
241.0
526_1
61 years, male
240.2
314_1
67 years, male
239.7
389_1
86 years, female
235.4
173_1
67 years, male
232.0
351_1
91 years, male
232.0
406_1
79 years, male
230.7
311_1
78 years, male
229.3
355_1
70 years, female
226.1
350_1
84 years, female
224.0
295_1
61 years, female
223.1
349_1
83 years, male
222.5
293_1
68 years, female
219.8
291_1
76 years, male
219.5
405_1
91 years, male
218.9
354_1
81 years, female
218.1
251_1
78 years, male
216.6
307_1
66 years, female
214.1
318_1
68 years, male
212.9
384_1
83 years, male
210.9
163_1
78 years, male
210.1
503_1
68 years, male
210.1
308_1
70 years, female
208.6
317_1
60 years, male
206.5
353_1
82 years, female
202.3
292_1
71 years, male
201.8
517_1
88 years, male
195.6
356_1
87 years, female
188.7
41_1
94 years, female
173.1
218_1
71 years, female
158.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.