HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:95.2 nTPM
HPA Brain:207.5 nTPM
GTEx:95.2 nTPM
FANTOM5:183.3 Scaled Tags Per Million
Pig:162.0 nTPM
Mouse:43.9 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031619
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 207.5
Sample id Sample description nTPM
Hippocampus
nTPM: 201.1
2621 Female, age 67, right hemisphere 241.8
2529 Female, age 94, left hemisphere 229.9
2148 Female, age 91, left hemisphere 223.6
1855 Male, age 76, left hemisphere 185.9
1911 Female, age 85, right hemisphere 165.2
1898 Male, age 80, left hemisphere 160.4
Dentate gyrus
nTPM: 189.5
2531 Female, age 67, both hemispheres 242.8
2530 Female, age 94, left hemisphere 208.6
2246 Female, age 85, both hemispheres 195.1
2528 Male, age 74, both hemispheres 180.6
2010 Male, age 76, both hemispheres 162.0
1927 Female, age 91, both hemispheres 148.0
Entorhinal gyrus
nTPM: 207.5
2686 Male, age 75, right hemisphere 255.7
2613 Female, age 94, left hemisphere 220.3
2764 Male, age 80, right hemisphere 198.9
2117 Female, age 91, right hemisphere 194.8
1787 Male, age 76, left hemisphere 187.8
1938 Female, age 85, left hemisphere 187.2
Hippocampus, CA1
nTPM: 166.7
2527 Male, age 74, both hemispheres 199.9
2045 Male, age 76, both hemispheres 168.2
1873 Female, age 85, both hemispheres 167.0
2082 Female, age 91, right hemisphere 163.9
2749 Male, age 80, left hemisphere 134.6
Hippocampus, CA2
nTPM: 156.6
2437 Female, age 94, left hemisphere 185.9
2113 Female, age 91, right hemisphere 167.3
1940 Female, age 85, left hemisphere 166.3
2249 Male, age 74, both hemispheres 152.8
1892 Male, age 76, both hemispheres 141.8
1963 Male, age 80, left hemisphere 125.4
Hippocampus, CA3
nTPM: 195.9
2861 Female, age 67, both hemispheres 299.6
2620 Female, age 94, left hemisphere 263.1
2137 Male, age 80, left hemisphere 160.1
1891 Female, age 85, both hemispheres 157.8
2436 Male, age 74, both hemispheres 152.1
1867 Male, age 76, both hemispheres 142.5
Parahippocampal cortex
nTPM: 202.2
2622 Female, age 67, right hemisphere 271.9
2245 Female, age 91, both hemispheres 249.2
2692 Male, age 74, both hemispheres 236.4
2532 Female, age 72, left hemisphere 227.7
2250 Female, age 67, right hemisphere 189.1
2693 Female, age 94, both hemispheres 187.6
1850 Male, age 80, both hemispheres 172.6
1933 Female, age 85, both hemispheres 167.7
1990 Female, age 91, right hemisphere 163.6
2018 Male, age 76, both hemispheres 156.2
Perirhinal gyrus
nTPM: 175.0
2848 Male, age 76, right hemisphere 199.4
1794 Male, age 80, right hemisphere 183.7
2521 Female, age 94, right hemisphere 171.2
1841 Female, age 85, right hemisphere 169.6
1847 Female, age 91, left hemisphere 150.9
Subiculum
nTPM: 181.4
2619 Male, age 74, both hemispheres 228.9
2438 Female, age 94, left hemisphere 208.4
2042 Male, age 76, both hemispheres 170.6
2729 Female, age 91, right hemisphere 169.8
1901 Male, age 80, both hemispheres 156.5
1977 Female, age 85, both hemispheres 154.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 95.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.2
Samples: 197

Max nTPM: 190.4
Min nTPM: 46.4
Std nTPM: 22.8
Median nTPM: 91.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 190.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 179.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 161.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 155.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 153.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 150.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 148.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 144.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 144.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 139.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 137.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 183.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 183.3
FF:10153-102I9 76 years, female 202.5
FF:10169-103B7 60 years, female 164.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 162.0
Pig sample Sample description nTPM
Subiculum
nTPM: 135.8
Samples: 4

Max nTPM: 179.0
Min nTPM: 109.8
Sample A Female 179.0
Sample B Female 113.2
Sample C Male 141.3
Sample D Male 109.8
Dorsal hippocampus
nTPM: 102.4
Samples: 4

Max nTPM: 111.4
Min nTPM: 92.6
Sample A Female 104.0
Sample B Female 101.4
Sample C Male 111.4
Sample D Male 92.6
Entorhinal cortex
nTPM: 162.1
Samples: 4

Max nTPM: 176.1
Min nTPM: 127.5
Sample A Female 175.6
Sample B Female 127.5
Sample C Male 176.1
Sample D Male 169.0
Ventral hippocampus
nTPM: 125.4
Samples: 4

Max nTPM: 179.5
Min nTPM: 96.8
Sample A Female 103.0
Sample B Female 96.8
Sample C Male 179.5
Sample D Male 122.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 50.6
Min nTPM: 35.8
Sample A Male 45.3
Sample B Male 43.9
Sample C Female 35.8
Sample D Female 50.6
Hippocampal formation
nTPM: 36.5
Samples: 4

Max nTPM: 39.3
Min nTPM: 33.8
Sample A Male 35.4
Sample B Male 37.6
Sample C Female 33.8
Sample D Female 39.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
68911027 Antisense, RP_050203_02_G07, Mouse strain C57BL/6J (56 days, male) 14.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org