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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPSB2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
45.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
44.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
41.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
28.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
27.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPSB2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
55.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
54.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
40.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
29.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
26.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
24.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
13.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
11.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
11.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
10.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
10.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
8.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
8.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
8.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
8.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
8.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
7.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
7.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
7.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
7.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
7.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
7.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
7.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
7.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
7.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
7.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
7.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
7.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
7.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
6.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
6.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
6.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
6.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
6.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
6.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
6.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
6.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
6.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
6.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
6.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
6.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
6.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
6.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
6.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
6.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
6.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
6.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
6.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
6.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
6.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
6.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
6.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
6.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
5.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
5.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
5.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
5.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
5.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
5.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
5.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
5.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
5.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
5.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
5.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
5.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
5.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
5.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
5.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
5.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
5.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
5.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
5.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
5.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
5.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
5.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
5.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
5.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
5.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
5.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
5.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
4.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
4.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
4.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
4.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
4.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
4.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
4.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
4.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
4.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
4.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
4.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
4.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
4.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
4.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
4.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
4.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
4.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
4.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
4.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
4.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
4.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
4.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
4.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
4.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
4.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
4.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
4.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
4.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
4.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
4.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
3.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
3.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
3.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
3.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
3.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
3.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
3.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
3.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
3.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
3.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
3.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
2.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
2.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
2.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
2.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPSB2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
47.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
30.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
21.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
20.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
13.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
12.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
10.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
9.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
8.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
8.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
8.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
7.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
7.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
7.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
7.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
7.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
6.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
5.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
5.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
5.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
4.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
4.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
4.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
4.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
3.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPSB2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
83.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
77.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
74.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
71.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
71.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
70.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
66.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
63.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
61.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
60.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
58.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
57.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
56.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
56.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
56.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
55.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
54.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
52.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
51.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
49.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
49.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
46.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
46.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
44.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
44.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
44.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
44.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
43.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
42.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
42.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
41.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
41.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
40.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
39.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
39.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
38.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
36.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
36.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
36.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
35.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
35.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
35.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
34.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
34.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
34.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
33.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
33.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
33.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
33.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
33.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
33.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
32.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
32.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
32.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
32.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
31.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
31.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
31.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
30.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
30.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
29.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
29.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
28.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
28.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
28.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
28.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
28.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
26.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
26.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
26.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
26.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
24.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
24.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
23.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
21.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
20.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
19.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
18.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
18.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
14.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
12.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
10.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
7.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
4.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
