HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.8 nTPM
HPA Brain:21.6 nTPM
GTEx:31.8 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:32.1 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057338
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 20.4
1855 Male, age 76, left hemisphere 22.2
2621 Female, age 67, right hemisphere 21.4
1911 Female, age 85, right hemisphere 20.6
1898 Male, age 80, left hemisphere 20.0
2529 Female, age 94, left hemisphere 19.4
2148 Female, age 91, left hemisphere 19.1
Dentate gyrus
nTPM: 18.7
1927 Female, age 91, both hemispheres 21.7
2528 Male, age 74, both hemispheres 20.3
2010 Male, age 76, both hemispheres 20.2
2246 Female, age 85, both hemispheres 17.5
2530 Female, age 94, left hemisphere 16.9
2531 Female, age 67, both hemispheres 15.6
Entorhinal gyrus
nTPM: 21.1
1787 Male, age 76, left hemisphere 23.1
2764 Male, age 80, right hemisphere 22.6
2117 Female, age 91, right hemisphere 21.5
1938 Female, age 85, left hemisphere 21.3
2686 Male, age 75, right hemisphere 21.3
2613 Female, age 94, left hemisphere 16.8
Hippocampus, CA1
nTPM: 20.0
2749 Male, age 80, left hemisphere 21.7
2082 Female, age 91, right hemisphere 21.3
1873 Female, age 85, both hemispheres 19.5
2045 Male, age 76, both hemispheres 19.1
2527 Male, age 74, both hemispheres 18.3
Hippocampus, CA2
nTPM: 20.1
1892 Male, age 76, both hemispheres 24.0
1963 Male, age 80, left hemisphere 21.0
1940 Female, age 85, left hemisphere 19.4
2113 Female, age 91, right hemisphere 19.3
2437 Female, age 94, left hemisphere 18.9
2249 Male, age 74, both hemispheres 18.1
Hippocampus, CA3
nTPM: 18.4
1867 Male, age 76, both hemispheres 22.8
1891 Female, age 85, both hemispheres 20.5
2137 Male, age 80, left hemisphere 19.4
2620 Female, age 94, left hemisphere 16.6
2436 Male, age 74, both hemispheres 15.7
2861 Female, age 67, both hemispheres 15.3
Parahippocampal cortex
nTPM: 19.6
2018 Male, age 76, both hemispheres 25.0
1850 Male, age 80, both hemispheres 23.3
2532 Female, age 72, left hemisphere 20.6
2693 Female, age 94, both hemispheres 20.4
2245 Female, age 91, both hemispheres 18.8
1990 Female, age 91, right hemisphere 18.0
2692 Male, age 74, both hemispheres 18.0
1933 Female, age 85, both hemispheres 17.9
2622 Female, age 67, right hemisphere 17.3
2250 Female, age 67, right hemisphere 16.7
Perirhinal gyrus
nTPM: 21.6
1847 Female, age 91, left hemisphere 23.1
1794 Male, age 80, right hemisphere 23.0
1841 Female, age 85, right hemisphere 21.7
2848 Male, age 76, right hemisphere 20.1
2521 Female, age 94, right hemisphere 20.0
Subiculum
nTPM: 19.3
2042 Male, age 76, both hemispheres 21.6
1977 Female, age 85, both hemispheres 21.1
1901 Male, age 80, both hemispheres 20.7
2729 Female, age 91, right hemisphere 19.2
2619 Male, age 74, both hemispheres 18.0
2438 Female, age 94, left hemisphere 15.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.8
Samples: 197

Max nTPM: 45.1
Min nTPM: 13.1
Std nTPM: 5.3
Median nTPM: 31.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 45.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 44.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 44.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 41.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 40.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 40.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 40.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 46.1
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.3
Pig sample Sample description nTPM
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 23.8
Min nTPM: 13.9
Sample A Female 23.8
Sample B Female 18.4
Sample C Male 13.9
Sample D Male 14.8
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 23.8
Min nTPM: 16.0
Sample A Female 23.8
Sample B Female 21.1
Sample C Male 16.0
Sample D Male 20.4
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.8
Sample A Female 15.8
Sample B Female 20.2
Sample C Male 15.3
Sample D Male 12.8
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 22.1
Min nTPM: 16.8
Sample A Female 16.8
Sample B Female 17.9
Sample C Male 22.1
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.5
Sample A Male 25.0
Sample B Male 27.5
Sample C Female 31.3
Sample D Female 24.5
Hippocampal formation
nTPM: 32.1
Samples: 4

Max nTPM: 34.7
Min nTPM: 30.0
Sample A Male 34.7
Sample B Male 30.0
Sample C Female 31.9
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
71608385 Antisense, RP_050927_01_F02, Mouse strain C57BL/6J (56 days, male) 15.2
357097 Antisense, RP_040617_02_B01, Mouse strain C57BL/6J (56 days, male) 13.0

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